Pseudomonas fitomaticsae: KJY40_26820
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Entry
KJY40_26820 CDS
T08740
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00900
Terpenoid backbone biosynthesis
pfit01100
Metabolic pathways
pfit01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
KJY40_26820 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pfit01006
]
KJY40_26820 (ispA)
Enzymes [BR:
pfit01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
KJY40_26820 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
KJY40_26820 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
KJY40_26820 (ispA)
Prenyltransferases [BR:
pfit01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
KJY40_26820 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UFP99584
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All DBs
Position
5932356..5933243
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AA seq
295 aa
AA seq
DB search
MIAAYSATSQARVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG
RAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA
FSALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHK
TGALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAAAEPLRDLARYIVDRRN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagcgtattcggctaccagccaggcccgcgttaacgcggcactggaaaccctg
ttcaacgccccgctaccagaactggcgcgcctctatgaagccatgcgctacagcgtaatg
aacggcggcaaacgcgtgcgtccgctgctggcctacgcggcatgcgaagcccttggcggc
agggccgaacaggccaacggcgcggcgtgtgcggttgagctgatccacgcgtattcactg
gtgcacgacgatttgccggcgatggacgacgacgatctgcgtcgcggccagccgactact
cacaagaaattcgacgaagcttgcgcgatcctcgccggcgacggcttgcagagtctggcg
ttcagcgccctgctcgacccgcgtctgagcgacctgagcgcggacatccgtctgcaacag
gtcactgcgctggcgcacgcggcgggcccggccggcatggtcggcggtcaggccatcgac
ctcggttcggtcggcctcaagcttgatcagaaagccctggaacagatgcaccggcacaag
accggcgcgctgatcgaagtcagcgtcaagctcggcgcactggccagcggccgtgccgag
aaggatgaactcaagtccctgcagacttatgcacaggccatcggcctggcgttccaggtc
caggacgacatcctcgacgtcgaaagcgataccgaaaccctcggcaagcgccagggtgcc
gacatcgcccgcgacaagccgacctacccggccctgctcggcctcgacgccgccaaggcc
tacgcactggaactgcgcgaccaggccctgcacgcgctgcgaccgtttgacgcggctgcc
gagccgttgcgcgatctggcccggtatatcgtcgatcggcgtaactga
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