Pseudomonas fitomaticsae: KJY40_27060
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Entry
KJY40_27060 CDS
T08740
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KJY40_27060 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_27060 (uvrA)
DNA repair and recombination proteins [BR:
pfit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KJY40_27060 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJY40_27060 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
AAA_33
DnaJ_CXXCXGXG
AAA_21
Viral_helicase1
nSTAND3
cobW
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UFP99630
LinkDB
All DBs
Position
5978676..5981510
Genome browser
AA seq
944 aa
AA seq
DB search
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTVSQMVDLVLAQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GRLCELDELPKLDKQKKHTIEVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEMIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEQPFNELPADQQKYILHGSGSQNVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQSCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDACDYFGALKMTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGTPDEVMAHPDSLTGKYLSGRVKIEVP
AKRTPRNKKQVLSLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIATGTPEEVAEMKQSHTGHYLKPLLIRDRA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagatcctgattcgtggggcccgcacccacaacctgaagaacatcgacctgacc
ctgccacgggacaaactgatcgtcatcaccggcctgtccggatccggcaagtcgtccctg
gccttcgatacgctgtacgccgaaggtcagcgccgctatgtcgaatccctgtcggcctat
gcccggcagttcctgtcgatgatggaaaaacccgacgtcgacaccatcgaaggcctgtcg
ccggcgatctccatcgaacagaagtcgacctcgcacaacccgcgctccacggtcggcacc
atcaccgaaatctacgactacctgcgtctgctctatgcgcgcgtcggtacgccgcgctgc
ccggatcacgacattccgctggaagcccagaccgtcagccagatggtcgacctggtgctg
gcccagccggaaggcagcaagctgatgctgctggcgccggtgattcgcgagcgcaagggc
gagcacctgtcggtgttcgaagaactgcgcgcccagggcttcgtccgggcccgggtcaac
ggccggctctgcgagctggacgagttgccgaagctggataaacagaagaagcacacgatt
gaagtcgtggtcgaccgcttcaaggttcgcgccgacctgcagcagcgtctggccgaatcc
ttcgaaaccgcactgaagctggcggacggcatcgcgctggtggcgccgatggacgacgag
ccaggcgaagagatgattttctccgcgcgcttcgcctgcccgatctgcggccacgcgatc
agcgagctggaacccaagctgttttccttcaacaacccggccggcgcctgcccgacctgc
gacggtctgggcgtgaaacagttcttcgacatcaaacgactggtcaacggtgagctgact
ctggccgaaggtgcgatacgcggctgggaccggcgcaacgtctattacttccagatgctc
ggctcattggccgcgcactacggtttcagcctggagcagccgttcaacgagctgccagcc
gaccagcagaagtacatcctgcacggcagcggttcgcagaacgtcgatttcaaatatctc
aatgaccggggcgacatcgtcaagcgctcgcacccgttcgaaggcatcgtgccgaacctt
gagcgccgctaccgcgagaccgaatcggcgagcgtgcgcgaagaactggcgaagttcctc
agcacccagtcctgcccggattgccgtggcacccgcctgcgtcgcgaagcgcggcacgtg
tgggttggcgagaaaaccctgccggcagtgaccaacctgccgataggcgacgcttgtgat
tacttcggcgcgctgaaaatgaccggccgccgtggagaaatcgccgacaagattctcaag
gagatccgcgagcgtctgcagtttctggtgaatgtcggtctcgactatctgtcgctggat
cgcagtgccgataccctgtctggcggtgaagcgcagcggattcgtctggccagtcagatc
ggcgcgggccttgtgggtgttctctatatccttgatgaaccgtccattggcctgcaccag
cgcgacaatgatcgcctgctcggcaccctcaagcacctgcgcgacatcggcaatacggtg
atcgtggtcgagcatgacgaagacgcgatccgcctggccgactacgtagtggatatcggc
ccgggcgccggggttcatggcgggcagatcgtcgccgaaggcacgccggatgaagtcatg
gcccacccggactcgctgaccggcaaatacctgtcgggccgggtcaagatcgaagtgccg
gccaagcgtacaccgcgcaacaagaagcaggtgctgtcgctcaagggcgcgcgcggcaac
aacctgcgcaacgtcgacctggaaatcccgatcggcctgctgacctgcgtgactggcgtc
tccggttccggcaaatcgacgctgatcaacaacacgctgttcccgctgagcgccaccgcg
ctcaacggtgcgaccaccctggaagccgcagcccacgacagcatcaagggcctggagcat
ctggacaaggtcgtcgacatcgaccagagcccgatcggccgtacgccacgctccaacccg
gcgacctataccgggctgttcacgccaatccgcgaactgtttgccggggttcccgagtcc
cgctcccgaggttacggcccggggcgtttctcgttcaacgtcaagggtggtcgttgcgaa
gcctgtcagggcgacggtctgatcaaggtggaaatgcacttcctgccggacatctacgtt
ccgtgcgacgtgtgcaagagcaagcgctacaaccgcgaaaccctggagatcaaatacaag
ggcaagagcatccacgaaaccctcgaaatgaccatcgaggaagcgcgggtgttcttcgac
gcggtgccggcgctggcgcgcaagctgcaaacgctgatggatgtgggcctgtcgtacatc
aagctcgggcaatcggcgaccacgctgtccggcggtgaagcccagcgggtcaagttgtcc
cgagagctgtccaagcgcgataccggcaagaccctgtacatcctcgacgagccgaccacc
ggtctgcacttcgcggatattcagcaactgctcgacgtactccatcgcctgcgcgaccac
ggcaacaccgtggtggtgatcgagcacaaccttgacgtgatcaagaccgccgactggctg
gtggatctcggccccgagggtggttcgaaaggtggacagatcatcgccaccggtacgccg
gaggaagtggccgaaatgaagcaatctcacaccgggcattacctcaagccgctgttgatc
cgcgatcgggcctga
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