KEGG   Pseudomonas fitomaticsae: KJY40_27060
Entry
KJY40_27060       CDS       T08740                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
pfit  Pseudomonas fitomaticsae
Pathway
pfit03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KJY40_27060 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfit03400]
    KJY40_27060 (uvrA)
DNA repair and recombination proteins [BR:pfit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KJY40_27060 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KJY40_27060 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 BCA_ABC_TP_C AAA_23 RsgA_GTPase AAA_33 DnaJ_CXXCXGXG AAA_21 Viral_helicase1 nSTAND3 cobW AAA_25
Other DBs
NCBI-ProteinID: UFP99630
LinkDB
Position
5978676..5981510
AA seq 944 aa
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTVSQMVDLVLAQPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARVN
GRLCELDELPKLDKQKKHTIEVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEMIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEQPFNELPADQQKYILHGSGSQNVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQSCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDACDYFGALKMTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGTPDEVMAHPDSLTGKYLSGRVKIEVP
AKRTPRNKKQVLSLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIATGTPEEVAEMKQSHTGHYLKPLLIRDRA
NT seq 2835 nt   +upstreamnt  +downstreamnt
ttggacaagatcctgattcgtggggcccgcacccacaacctgaagaacatcgacctgacc
ctgccacgggacaaactgatcgtcatcaccggcctgtccggatccggcaagtcgtccctg
gccttcgatacgctgtacgccgaaggtcagcgccgctatgtcgaatccctgtcggcctat
gcccggcagttcctgtcgatgatggaaaaacccgacgtcgacaccatcgaaggcctgtcg
ccggcgatctccatcgaacagaagtcgacctcgcacaacccgcgctccacggtcggcacc
atcaccgaaatctacgactacctgcgtctgctctatgcgcgcgtcggtacgccgcgctgc
ccggatcacgacattccgctggaagcccagaccgtcagccagatggtcgacctggtgctg
gcccagccggaaggcagcaagctgatgctgctggcgccggtgattcgcgagcgcaagggc
gagcacctgtcggtgttcgaagaactgcgcgcccagggcttcgtccgggcccgggtcaac
ggccggctctgcgagctggacgagttgccgaagctggataaacagaagaagcacacgatt
gaagtcgtggtcgaccgcttcaaggttcgcgccgacctgcagcagcgtctggccgaatcc
ttcgaaaccgcactgaagctggcggacggcatcgcgctggtggcgccgatggacgacgag
ccaggcgaagagatgattttctccgcgcgcttcgcctgcccgatctgcggccacgcgatc
agcgagctggaacccaagctgttttccttcaacaacccggccggcgcctgcccgacctgc
gacggtctgggcgtgaaacagttcttcgacatcaaacgactggtcaacggtgagctgact
ctggccgaaggtgcgatacgcggctgggaccggcgcaacgtctattacttccagatgctc
ggctcattggccgcgcactacggtttcagcctggagcagccgttcaacgagctgccagcc
gaccagcagaagtacatcctgcacggcagcggttcgcagaacgtcgatttcaaatatctc
aatgaccggggcgacatcgtcaagcgctcgcacccgttcgaaggcatcgtgccgaacctt
gagcgccgctaccgcgagaccgaatcggcgagcgtgcgcgaagaactggcgaagttcctc
agcacccagtcctgcccggattgccgtggcacccgcctgcgtcgcgaagcgcggcacgtg
tgggttggcgagaaaaccctgccggcagtgaccaacctgccgataggcgacgcttgtgat
tacttcggcgcgctgaaaatgaccggccgccgtggagaaatcgccgacaagattctcaag
gagatccgcgagcgtctgcagtttctggtgaatgtcggtctcgactatctgtcgctggat
cgcagtgccgataccctgtctggcggtgaagcgcagcggattcgtctggccagtcagatc
ggcgcgggccttgtgggtgttctctatatccttgatgaaccgtccattggcctgcaccag
cgcgacaatgatcgcctgctcggcaccctcaagcacctgcgcgacatcggcaatacggtg
atcgtggtcgagcatgacgaagacgcgatccgcctggccgactacgtagtggatatcggc
ccgggcgccggggttcatggcgggcagatcgtcgccgaaggcacgccggatgaagtcatg
gcccacccggactcgctgaccggcaaatacctgtcgggccgggtcaagatcgaagtgccg
gccaagcgtacaccgcgcaacaagaagcaggtgctgtcgctcaagggcgcgcgcggcaac
aacctgcgcaacgtcgacctggaaatcccgatcggcctgctgacctgcgtgactggcgtc
tccggttccggcaaatcgacgctgatcaacaacacgctgttcccgctgagcgccaccgcg
ctcaacggtgcgaccaccctggaagccgcagcccacgacagcatcaagggcctggagcat
ctggacaaggtcgtcgacatcgaccagagcccgatcggccgtacgccacgctccaacccg
gcgacctataccgggctgttcacgccaatccgcgaactgtttgccggggttcccgagtcc
cgctcccgaggttacggcccggggcgtttctcgttcaacgtcaagggtggtcgttgcgaa
gcctgtcagggcgacggtctgatcaaggtggaaatgcacttcctgccggacatctacgtt
ccgtgcgacgtgtgcaagagcaagcgctacaaccgcgaaaccctggagatcaaatacaag
ggcaagagcatccacgaaaccctcgaaatgaccatcgaggaagcgcgggtgttcttcgac
gcggtgccggcgctggcgcgcaagctgcaaacgctgatggatgtgggcctgtcgtacatc
aagctcgggcaatcggcgaccacgctgtccggcggtgaagcccagcgggtcaagttgtcc
cgagagctgtccaagcgcgataccggcaagaccctgtacatcctcgacgagccgaccacc
ggtctgcacttcgcggatattcagcaactgctcgacgtactccatcgcctgcgcgaccac
ggcaacaccgtggtggtgatcgagcacaaccttgacgtgatcaagaccgccgactggctg
gtggatctcggccccgagggtggttcgaaaggtggacagatcatcgccaccggtacgccg
gaggaagtggccgaaatgaagcaatctcacaccgggcattacctcaagccgctgttgatc
cgcgatcgggcctga

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