Pseudomonas fitomaticsae: KJY40_27640
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Entry
KJY40_27640 CDS
T08740
Name
(GenBank) DEAD/DEAH box helicase
Organism
pfit
Pseudomonas fitomaticsae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_30
AAA_19
AAA_22
SLFN-g3_helicase
NAT10_TcmA_helicase
AAA_34
PhoH
DUF87
Adeno_IVa2
Bac_DnaA
CMS1
AAA
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
UFP99736
UniProt:
A0ABY3Q0X0
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All DBs
Position
complement(6090031..6093078)
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AA seq
1015 aa
AA seq
DB search
MFEADELSPCMDAEWFVSGYSELQRKILDERLGKPYLNSDQVLAKRNLLRFSQAVLASAP
AWIDSKSGLERALCVAAGDIEAGFGIQSANTSDSVAQGRHFLKAALLYDMAGLPGASAKV
ARDSAFDNRVQDFFLRRRESFWGSLKDASASPSVQDEILIPEVEVPGDINRLVHTAIAEA
LFQQGENLQFGKEKSDQVHSVFRELSNQAGSYRLDLAGDDFIAISKVLDQRREYSSLAIL
EKYSGLDRSQINALGVPLEFWPVQKQAIEEGLLAENIISYGLAAPTGTGKTSLAKVLIAS
AIKSQPNKKVVYISPSRALVHQVSRDLADSLGRVGIKVRELGAHLTVHEQLSTSDESEVQ
VLVFTPERADLLLRVDQEFVKNIALVLVDEAHHIEQGSRGILLEFYLWRIRQLVSTDARV
IQLSAVAPNISDLVSWLSVGENSSSVKVDWRTNRLRLGRFEFISGEGVLKFEGVEPTPLA
VTECDDRLSRLARLAMNLSTSGIVLVLCTTVRLCEDLAERIFQMRSKLVNYSEYDGGEDI
ERLDAKIERELYPESSLRNHIKRKVAYHHAQLPPSVRISLEDIISAKKIDIVCATTTLAE
GVNFPFATVLVESLVSKNYQITPRSLWNIAGRAGRFGVDSEGHCILFEPQSYEHKLQGFT
LQNYLGTTLDSIPPVQSALGAALTELKEAIESGKIQESILESVKLGNIKIDGKNTALAKR
IRGLVNLVRVSYTHASVAGLVKLNSDNATEISTSMLASNQMSLDVKVFADTFSLQQKKVI
QTAFSSDAELMNIAARIGWSLEAQAELHEWLMSLDDWRLEKFGQIVVGGHIYKFDALSYL
LGPVSKFMSEFEGDKLGGVTSFVSCIWVEGQPLTSIRDRQQNKNLGELVRMIYSKVQYLL
PWALYGVAELLSYEAKRRRIKVQGGVRDLSVLAAEGVPNFNALQLVMGLGLERVDATRIA
AAYGAPNTGKRQTTDVVGFFRGLEAKDLFRIVRGNDRRRIDPDIYGIWQKINGKT
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagcagatgaactcagcccttgcatggacgcagaatggtttgtttctggttat
tctgaactccagcgcaaaatactggatgagaggctggggaagccttacctaaacagcgac
caagtcctagcgaaacgaaatcttctgcgatttagccaagctgttttagccagtgcccct
gcatggatcgattctaagtctggattggagcgagctttatgtgtggctgctggtgatatc
gaagcaggattcggaattcagtcagctaatacgtccgattctgtagcccaaggcagacat
tttctaaaggccgctttgttatatgatatggctggtctgcctggtgcatctgcgaaggtc
gctagggactcagctttcgataatcgtgtgcaagactttttcttgcgacgtcgagaaagt
ttttgggggagtttaaaagatgcttcggcttctccatctgttcaggatgagatattaata
ccagaggtagaagtaccaggtgatattaataggctggtacacacagcaatagcagaggcg
cttttccaacaaggtgagaatctccagtttggaaaagaaaaatctgatcaggttcactct
gtttttcgcgagcttagtaatcaggcgggtagttatcgactagatctcgctggtgatgat
ttcatcgctatttctaaggtgttggatcaaaggcgtgagtattctagcctagcgatctta
gaaaaatattcaggtttagatcgctctcaaatcaacgcattaggtgtgcctcttgaattt
tggccggttcaaaaacaagccattgaagaaggtcttctagcggagaatattattagctac
ggcctggctgcgccgactgggacaggtaaaacctcgttagctaaagttttgattgcgtct
gccattaagtcacagccaaataagaaagttgtgtatatttctcctagtcgcgctctcgtt
catcaagtttctagagatttggcggattcacttgggcgggtaggtataaaagtcagagaa
ttgggagctcatctaacagttcatgagcaattgtctacgtccgatgaatctgaggtgcag
gttctagtatttactcctgaaagggccgatctgctacttagggtggaccaagagttcgta
aaaaatattgcacttgttttggtagatgaggcgcatcatattgagcaggggtccagaggg
attctattagaattttatttgtggcggattagacagctagtatctacagatgcaagagtc
attcagctctctgcagtagccccaaatatatctgatttagtatcatggcttagtgttggt
gagaactcctcgtcggtaaaggtggattggagaaccaaccggctaagactaggaaggttc
gagttcatatctggcgagggggttttgaaattcgaaggtgtagagccaacgcctttagca
gtaactgagtgtgatgatcgccttagtagattggctcgcttggcgatgaatctttcgacg
tcaggaattgtcctagtcctttgtacaactgtgagattgtgtgaagatctcgctgagcgt
attttccaaatgagatctaaactcgtgaattatagcgagtatgacggcggggaagatata
gaaagattagatgctaagatcgaaagagagttatacccggaatcatcactaagaaatcat
ataaagaggaaggtggcttatcatcatgctcaacttccgccgagtgtgcgtatatctcta
gaagatataatatctgcaaaaaaaattgatattgtatgtgctactacaaccttggcggag
ggggttaattttccctttgcaaccgtactggtagaatcgctagtttcaaaaaattaccag
atcactccgcgctctctttggaatattgcgggccgagctgggaggtttggagttgactct
gaaggacactgcatactttttgaaccccagagttatgagcataagctgcagggatttacg
ttacaaaattacctcggaacgactctggattctatacctccagtgcagtcagctttagga
gcggctttgactgagcttaaagaggctattgagtcggggaagattcaagagtctatttta
gaaagtgttaagcttggtaatataaaaattgatggtaaaaatacagctcttgctaaaagg
attcgtggtctagtaaacctcgtacgtgtgagctatacgcatgcaagcgttgcagggctt
gtgaagttgaattctgataatgctaccgaaatatccacaagcatgcttgcatctaaccag
atgagcttggatgtcaaggtgtttgccgatacttttagtctgcaacagaagaaagttata
caaaccgcattttcttctgatgctgaattgatgaatattgcagcccgtatcggttggtca
cttgaagcccaagcagagcttcatgagtggctaatgtcgctcgatgattggcgtctcgaa
aaatttggtcagatagtagttggtggacatatttataaatttgatgctctgagctaccta
ttagggccagtgtcaaaattcatgtctgaatttgaaggggataaacttggcggggttacg
tcttttgtttcttgtatctgggtcgagggtcagccactaacgtcaatacgagatcgtcag
cagaataaaaatcttggcgagctagttcgtatgatttattcaaaagttcaatatttgctg
ccgtgggcgctttatggcgtggcagagttgttgtcctatgaggcgaaacgtcgaagaatc
aaggttcaaggtggtgttagggatttatctgtgctggccgctgaaggtgttcctaacttt
aatgccttacaacttgtgatggggcttggcctggagcgagtggatgcaactagaattgca
gcggcctatggcgcgcctaatacgggtaagagacaaacaactgatgtagtaggttttttt
agaggtttagaggccaaagatctgttccgaattgtgcgtggtaacgacaggcggcgtata
gatccggatatttacggtatatggcaaaaaattaacggaaaaacgtag
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