KEGG   Pseudomonas fitomaticsae: KJY40_27820
Entry
KJY40_27820       CDS       T08740                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pfit  Pseudomonas fitomaticsae
Pathway
pfit03030  DNA replication
pfit03430  Mismatch repair
pfit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KJY40_27820
   03430 Mismatch repair
    KJY40_27820
   03440 Homologous recombination
    KJY40_27820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfit03032]
    KJY40_27820
   03400 DNA repair and recombination proteins [BR:pfit03400]
    KJY40_27820
Enzymes [BR:pfit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KJY40_27820
DNA replication proteins [BR:pfit03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KJY40_27820
DNA repair and recombination proteins [BR:pfit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KJY40_27820
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: UFP99770
UniProt: A0ABY3Q153
LinkDB
Position
6135703..6136410
AA seq 235 aa
MSLFSWLRPTSPVVPDDLQQRLTKLPAIGELRECSLREQRWVVLDLETTGLNLNKDRVLS
VGAVVIEDGAIDFSQQFERTLQCRELKLGPSVLIHGLAPSAIAAGSEPTEALVDLLEFIG
DSPVLAFHASFDQHMLGRALKEHLGHKLQTVFLDVAQIAPLVCPQAHIREAGLDEWIDWF
KLEVFERHHASADALATAELALILFSRARQQQIHSPLNLQQRLSQLKRRQQTHSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgttttcgtggctgcgtccgaccagccccgttgtgccggacgacctgcaacaa
cgcctgacgaaactgccggccatcggcgaactgcgtgaatgcagcctgcgcgagcagcgt
tgggtggtgctggatctggaaaccaccgggctgaacctgaacaaggatcgggtgctgtcg
gtcggcgcggtggtgatcgaggacggtgcgatcgacttcagtcagcagttcgaacgcacc
ctgcaatgccgcgagctgaaactcggaccgagcgtgttgattcacggtctggccccgagc
gcgattgccgccggcagcgagcccacggaagcgctggtcgatctgctggaatttatcggc
gacagcccggtgctggcgtttcacgcttcgttcgaccagcacatgctcggccgtgcattg
aaggaacatctggggcacaagttgcagacggtgttcctcgatgtggcgcagatcgccccg
ttggtttgcccgcaggcgcacattcgcgaggccgggctggacgagtggatcgactggttc
aagctcgaagtgttcgagcgtcaccatgcgagtgccgatgccctggccacggcggaactg
gcgctgatcctgttcagccgggcacgccagcagcaaattcatagtccactgaatctgcag
caacgcctgagtcagttgaaacgccgccagcagacgcattcgttctga

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