Pseudomonas fitomaticsae: KJY40_27820
Help
Entry
KJY40_27820 CDS
T08740
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit03030
DNA replication
pfit03430
Mismatch repair
pfit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJY40_27820
03430 Mismatch repair
KJY40_27820
03440 Homologous recombination
KJY40_27820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfit03032
]
KJY40_27820
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_27820
Enzymes [BR:
pfit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJY40_27820
DNA replication proteins [BR:
pfit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJY40_27820
DNA repair and recombination proteins [BR:
pfit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJY40_27820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UFP99770
UniProt:
A0ABY3Q153
LinkDB
All DBs
Position
6135703..6136410
Genome browser
AA seq
235 aa
AA seq
DB search
MSLFSWLRPTSPVVPDDLQQRLTKLPAIGELRECSLREQRWVVLDLETTGLNLNKDRVLS
VGAVVIEDGAIDFSQQFERTLQCRELKLGPSVLIHGLAPSAIAAGSEPTEALVDLLEFIG
DSPVLAFHASFDQHMLGRALKEHLGHKLQTVFLDVAQIAPLVCPQAHIREAGLDEWIDWF
KLEVFERHHASADALATAELALILFSRARQQQIHSPLNLQQRLSQLKRRQQTHSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttttcgtggctgcgtccgaccagccccgttgtgccggacgacctgcaacaa
cgcctgacgaaactgccggccatcggcgaactgcgtgaatgcagcctgcgcgagcagcgt
tgggtggtgctggatctggaaaccaccgggctgaacctgaacaaggatcgggtgctgtcg
gtcggcgcggtggtgatcgaggacggtgcgatcgacttcagtcagcagttcgaacgcacc
ctgcaatgccgcgagctgaaactcggaccgagcgtgttgattcacggtctggccccgagc
gcgattgccgccggcagcgagcccacggaagcgctggtcgatctgctggaatttatcggc
gacagcccggtgctggcgtttcacgcttcgttcgaccagcacatgctcggccgtgcattg
aaggaacatctggggcacaagttgcagacggtgttcctcgatgtggcgcagatcgccccg
ttggtttgcccgcaggcgcacattcgcgaggccgggctggacgagtggatcgactggttc
aagctcgaagtgttcgagcgtcaccatgcgagtgccgatgccctggccacggcggaactg
gcgctgatcctgttcagccgggcacgccagcagcaaattcatagtccactgaatctgcag
caacgcctgagtcagttgaaacgccgccagcagacgcattcgttctga
DBGET
integrated database retrieval system