Pseudomonas fitomaticsae: KJY40_27925
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Entry
KJY40_27925 CDS
T08740
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00260
Glycine, serine and threonine metabolism
pfit00460
Cyanoamino acid metabolism
pfit00630
Glyoxylate and dicarboxylate metabolism
pfit00670
One carbon pool by folate
pfit00680
Methane metabolism
pfit01100
Metabolic pathways
pfit01110
Biosynthesis of secondary metabolites
pfit01120
Microbial metabolism in diverse environments
pfit01200
Carbon metabolism
pfit01230
Biosynthesis of amino acids
pfit01240
Biosynthesis of cofactors
pfit04981
Folate transport and metabolism
Module
pfit_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KJY40_27925
09102 Energy metabolism
00680 Methane metabolism
KJY40_27925
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KJY40_27925
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KJY40_27925
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KJY40_27925
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KJY40_27925
Enzymes [BR:
pfit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KJY40_27925
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UFP99791
LinkDB
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Position
complement(6157353..6158606)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aagcgcgtcatggaagcgcaaggcagcggcctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaggtcgaagccctggccatcgaa
cgtgccaagcagctgttcggcgccgattacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtgtacctggccctgttgcaagcaggcgacaccatcctcggcatgagc
ctggcccacggtggtcacctgacccacggcgccaaggtttcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaagaccggcctgatcgattacgacgaagtcgag
cgtctggctgtcgagtgcaaaccgaaaatgatcgtcgccggtttctcggcctactcgaaa
accctcgacttcccgcgcttccgtcagatcgctgacaaggtcggtgcgctgctgttcgtc
gatatggcccacgtcgccggtctggtggctgccggtctgtacccgaacccgctgccgtac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaagtccaacgaagaaatcgagaagaagctcaacgccgcggtattccccggcgcc
cagggcggcccgctgatgcacgtcatcgccggcaaggccgtgtgcttcaaggaagcgctg
gagcctggcttcaaggcctatcagcaacaagtgatcgacaacgcccaggcgatggcgagc
gtatttatcaaacgtggctacgatgtagtgtccggcggcaccgacaaccatctgttcctg
gtcagcctgatccgccagggcctcaccggtaaggacgcagacgccgccctcggtcgcgct
cacatcaccgtcaacaagaacgccgtaccgaacgacccgcagtcgccgttcgtgacctcc
ggcctgcgcatcggcaccccggcggtgaccacccgcggcttcaaggtgacccagtgcgtg
acgctggccggctggatctgcgacatcctcgacaaccttggcgatgccgatgtcgaggcc
aacgtcgcccagcaggtttcggccctgtgcgctgacttcccggtttatcgctga
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