KEGG   Pseudomonas fitomaticsae: KJY40_29405
Entry
KJY40_29405       CDS       T08740                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pfit  Pseudomonas fitomaticsae
Pathway
pfit00300  Lysine biosynthesis
pfit00470  D-Amino acid metabolism
pfit01100  Metabolic pathways
pfit01110  Biosynthesis of secondary metabolites
pfit01120  Microbial metabolism in diverse environments
pfit01230  Biosynthesis of amino acids
Module
pfit_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    KJY40_29405 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    KJY40_29405 (dapF)
Enzymes [BR:pfit01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     KJY40_29405 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like Tail_completion_gp17
Other DBs
NCBI-ProteinID: UFQ00078
LinkDB
Position
6467817..6468647
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKMWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFQAPEQALSYQVDVDGTPVDLAAVSMGNPHAVLRVSDINTAPVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctgggcaacgacttcatggttctcgacctg
gtcagccagcacgcgcatattcagcccaagcacgcaaaaatgtggggcgaccggcacacc
ggcatcggtttcgaccagttgctgatcgtcgaagcgccgagcaatccggatgtggatttc
cgttaccggatcttcaactccgacggttccgaagtggagcagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctcgacaagcgcctgaccgccaaacggcagatccgcgtcgag
accaagggcggcatcatcgagctggacgtgcgtaacgacggccagatcggcgtgaacatg
ggcgccccgcgcctggtgccggcggacattccgttccaggcgccggagcaggccctgagt
tatcaggtcgatgtcgacggtacgccggtcgatctggcggcggtatcgatgggcaacccc
catgcggtgctgcgggtcagcgatatcaacactgcaccggtgcatgaactggggccgaaa
atcgaacaccatccgcgcttcccggcgcgggtcaacgtcggctttctccaggtcatcgac
cgccatcgcgcgcaactgcgcgtctgggaacgcggcgccggggaaacccaggcctgcggc
accggtgcctgcgctgctgctgtagctgcgatcagtcaggggtggatggattcgccactg
ctgatcgacctgccgggcgggcgcctgtccattgagtgggcaggccccggccaaccggtg
ttgatgaccggcccggcagtgcgcgtatacgaaggacaagtgcgtctttga

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