Pseudocercospora fijiensis: MYCFIDRAFT_114532
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Entry
MYCFIDRAFT_114532 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03030
DNA replication
pfj03410
Base excision repair
pfj03420
Nucleotide excision repair
pfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCFIDRAFT_114532
03410 Base excision repair
MYCFIDRAFT_114532
03420 Nucleotide excision repair
MYCFIDRAFT_114532
03430 Mismatch repair
MYCFIDRAFT_114532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfj03032
]
MYCFIDRAFT_114532
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_114532
DNA replication proteins [BR:
pfj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MYCFIDRAFT_114532
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MYCFIDRAFT_114532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_16
AAA_33
nSTAND3
RuvB_N
AAA_14
AAA_28
NACHT
AAA_18
AT_hook
Motif
Other DBs
NCBI-GeneID:
19330258
NCBI-ProteinID:
XP_007921086
JGI:
114532
UniProt:
N1Q679
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MPSDIRSFFGGKPAAAPAEKPKPKEEPKKRGRPRKVIEDDDDEDEAAPKKATPKKAPAKK
KPEPEVELEETTAGDFFGKSKPKRSEAVSNKRSVKQAATAESTPFKKQTGKTNGSAKATP
NGRSSARAKKTVSYVDLDADDFPDDDFEDGAEDEFKAGAKVGRRMGDDYEEGSDDEDDNP
LVPKKRESGKQQKLKDEGQDDNDPDKDVDMRDYNPDDDFPAKKTPARASKKRKSHVIEEN
ENSDLEVEEAKPKKRATPAKKTTPAAKKAKKDAPQDSAEVKAILDSIPTVQAPEPPKKSS
AGGEEGAKPRFQYGQQHANSAMPAGAIDDSELPTGNENCLAGLTFVFTGQLQSLGREQGA
ALVKRWGGKVTTAPSSKTSYVVLGDDAGPKKLETIKKFGLKTINEEGLFALIRKLPANGG
DGAAAEKYAEKMAKEEAHIREQAAEIDRQEKAAKARLSAPNQSPVKSSSSKTAVQGNSAS
LKSADKGKSSVEGPDTRLWTVRYAPQSLGQICGNKGAVEKLQRWLRNFPKNQKTGFKLMG
PDGSGLHRAVMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVEQGLKGVLSTT
SLMGYFGRGADDVDASKKKLVLIMDEVDGMSAGDRGGVGALAAVCKKTMIPMILICNDRK
LPKMKPFDFVTYDLPFRRPTTDMIRSRIMTIAYREGLKMPPPVINALIEGSGADIRQVVN
MISTAKLDSQNLSYEESKDMSKAWEKHIVLKPWDMVGKILGPTIWNAASHSTLNDKQELY
FNDHEFAPLMLQENYLGTNVQRAKKYVNPKKQHLATLDLVSKAAESISDGDLVDRMIHGS
QQQWSLMPTHAMFSFVRPASFVNGSMAGHQTRFASWLGKNSNQGKLMRYVKEIQGHMRLR
VSADRHEIRQTYMPILYEKLIKKLQVEGKEAVPEIIELMDSYFLTKEDWDAILELGVGKA
DMENIKIETQAKATFTRMYNQQSHPLPFMKASQIVAPKKAPSKEKPDLEDAFEESEDEAV
DDAEVKDEEEEIDLSKDKYVRQPKKKKAAATKATGSKKKKTAVDDNDDEEEEEEKPKKGK
GK
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagacatccgctcattcttcggcggcaagccagcagctgcaccggccgaaaag
cccaagcccaaggaggagcccaagaagcgaggtcgaccgcggaaagtgattgaggatgac
gacgatgaagacgaagctgcaccgaagaaggcaacgcccaaaaaagctccagcgaagaag
aagcctgagcctgaggtcgagttggaggagacaaccgcgggcgatttctttggcaagagc
aagccgaagaggagcgaagctgttagcaataagagatccgtcaagcaagcagcgacagca
gagagcacaccattcaagaagcagacaggcaagaccaatggcagtgccaaagctactccg
aatggcaggagctctgctcgagctaagaagacagtaagctacgtcgatctcgatgctgac
gacttccccgatgacgactttgaggatggcgctgaagatgagttcaaggctggcgcgaaa
gtgggacgacgcatgggcgacgactatgaggaaggcagtgacgacgaagacgacaacccg
ctggtgccgaagaagcgggagagtgggaagcagcaaaagctcaaagacgaaggacaggat
gacaacgatcctgataaggatgttgatatgagagactataaccctgatgatgactttccg
gctaagaagactcctgccagagcaagcaagaagcggaagtcacatgttattgaggagaac
gagaatagcgacctcgaagtggaggaggctaaacccaagaagcgtgccactccggcgaag
aagaccactcctgccgcgaagaaggccaagaaagacgcgccccaggatagtgcagaagtg
aaggccattcttgacagcattcctacagttcaagcaccagaacctcccaagaagtcttct
gcaggtggagaggaaggcgcgaagcccaggttccaatacggccagcaacacgccaactct
gccatgcccgcaggagcaatagacgattccgagcttcccaccggcaatgaaaattgtctt
gcagggcttacgtttgtattcactggccagctgcaatctcttggcagagaacaaggcgct
gcgcttgtcaagcggtggggaggcaaggttaccacagcaccatcaagcaagaccagctat
gtggtattgggtgacgatgcaggcccaaagaaacttgagacgatcaagaagttcggttta
aagacgattaatgaagaaggactttttgcgctcatccggaagttgcctgcaaacggtggc
gatggcgccgcggctgaaaagtatgcagagaaaatggcaaaggaggaggcacatattcga
gaacaagccgcagagattgatcggcaggagaaggcagcaaaggctcgtctatcagctcct
aaccagagtccagtcaagtcttcatcgtcgaaaacagcggtgcaaggcaactcggcctca
cttaagagtgcggacaagggcaaatcatcagtagaaggccctgacacccgactctggacc
gtcagatatgctccacaatcgctcggtcaaatatgtggtaacaagggcgcggtcgagaag
ctgcagcgatggctgcgaaacttcccgaagaaccagaagaccggcttcaagttaatggga
cctgatggcagcggtctccatagggctgtaatgatacacgggccaccaggtattggcaag
accaccgccgcacatctggtcgcgaagctggaaggctatgatatcgttgaatcgaatgca
tccgacacccgatcgaagaagcttgtcgaacagggcttgaaaggcgtgctgtccacaact
tcgctcatgggctactttgggcgtggcgcagatgatgttgatgcatcgaagaagaaactc
gtcctcatcatggacgaagtggatggcatgagtgctggtgacagaggaggtgtcggcgct
ttggcggcggtttgcaagaagaccatgatacccatgattctcatctgcaacgatcgcaag
ctgccgaagatgaaaccgttcgactttgtcacgtacgacttgccatttagacgtccgacc
actgatatgatccgcagtcgtattatgactattgcctaccgtgaaggactcaagatgccg
ccgccagttatcaacgcgctgatcgagggttctggtgccgacattcgtcaagttgtcaat
atgatcagcaccgccaagcttgacagccagaatttgtcgtacgaagagagcaaggacatg
agcaaagcatgggagaagcatattgtactgaagccctgggacatggtcggcaagatcctt
ggacctacaatttggaacgcagcatctcattcgacattgaatgacaagcaggagctttac
ttcaacgaccacgaatttgcgcctctaatgctgcaagagaactacctgggaacaaatgta
cagcgtgccaagaaatatgtgaatccgaagaagcaacatctggcgacactagatttggtc
agcaaggcagcagaatcgattagtgatggagatctggttgaccgcatgatccatggaagc
cagcagcaatggtcgctgatgccaacgcacgctatgttcagcttcgtacgaccagcgagc
ttcgtcaatggctcaatggcaggacaccagactcggttcgcttcgtggcttggcaagaac
tcgaaccagggcaagcttatgcgatacgtcaaggagattcaaggccacatgcgtctaagg
gtttcggctgatcgacacgagatacggcagacatatatgccaatactgtacgagaagctc
atcaagaagctgcaggtcgagggcaaagaggcagtgcctgagatcattgagcttatggac
tcatacttcttgacgaaggaagactgggatgctattcttgagctgggtgtgggcaaggct
gacatggagaacatcaagattgagacacaggctaaggccactttcacgcggatgtacaac
cagcagtcgcacccactccccttcatgaaagcatcacagatcgttgcacccaagaaggct
ccttcgaaagagaagccagacctggaggacgcattcgaagaatcagaagacgaagctgtc
gacgatgccgaggtcaaggatgaagaggaagaaatcgaccttagcaaagacaaatatgtc
aggcaacccaagaagaagaaggctgccgcaacaaaggcgactggcagcaagaagaagaag
acggcggttgatgacaatgatgatgaagaggaggaagaggagaagccgaagaagggcaaa
ggcaag
DBGET
integrated database retrieval system