Pseudocercospora fijiensis: MYCFIDRAFT_123012
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Entry
MYCFIDRAFT_123012 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03013
Nucleocytoplasmic transport
pfj03015
mRNA surveillance pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_123012
09122 Translation
03013 Nucleocytoplasmic transport
MYCFIDRAFT_123012
03015 mRNA surveillance pathway
MYCFIDRAFT_123012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_123012
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_123012
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCFIDRAFT_123012
Spliceosome [BR:
pfj03041
]
Complex C
Other components
EJC/TREX
MYCFIDRAFT_123012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
NRIP1_repr_3
Motif
Other DBs
NCBI-GeneID:
19330497
NCBI-ProteinID:
XP_007926756
JGI:
123012
UniProt:
M2ZX52
LinkDB
All DBs
Position
Unknown
AA seq
146 aa
AA seq
DB search
MADEEMQDAPPSPQNDGQSKNGFSGETKTQHNAAAVRSIEGWIIIVTNVHEEASEEDIQD
MFGEYGEIKNLHMNLDRRTGYVKGYVLIEYPTVQEAKAAIEGANGEQLLEQTIHVDFAFV
RPPPTKSNSAPKGGRKGGRDRSASPG
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaggaaatgcaggacgcgccgccgtcaccacagaatgacgggcaaagcaag
aatggcttcagcggggagaccaagacacagcacaacgcagcggcggtgcgcagtatcgaa
ggatggatcatcattgtcacgaacgtgcacgaggaggcgtcagaagaagacatccaggac
atgtttggcgagtacggcgaaatcaagaatctgcacatgaatttggaccgcagaacagga
tatgtcaagggctacgtcttgatcgagtatcctactgtgcaagaagcaaaagccgcaatc
gagggcgcgaacggcgagcagctgctcgagcagaccatccacgtagacttcgctttcgta
cgacctcccccgacgaagagcaactcagcgccgaaaggtggcaggaagggcggcagagat
cgcagcgcaagtcccggt
DBGET
integrated database retrieval system