KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_125670
Entry
MYCFIDRAFT_125670 CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03030  DNA replication
pfj03410  Base excision repair
pfj03420  Nucleotide excision repair
pfj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MYCFIDRAFT_125670
   03410 Base excision repair
    MYCFIDRAFT_125670
   03420 Nucleotide excision repair
    MYCFIDRAFT_125670
   03430 Mismatch repair
    MYCFIDRAFT_125670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfj03032]
    MYCFIDRAFT_125670
   03400 DNA repair and recombination proteins [BR:pfj03400]
    MYCFIDRAFT_125670
Enzymes [BR:pfj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MYCFIDRAFT_125670
    6.5.1.6  DNA ligase (ATP or NAD+)
     MYCFIDRAFT_125670
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MYCFIDRAFT_125670
DNA replication proteins [BR:pfj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MYCFIDRAFT_125670
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MYCFIDRAFT_125670
DNA repair and recombination proteins [BR:pfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MYCFIDRAFT_125670
   NER (nucleotide excision repair)
    Other NER factors
     MYCFIDRAFT_125670
   MMR (mismatch excision repair)
    Other MMR factors
     MYCFIDRAFT_125670
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 19330585
NCBI-ProteinID: XP_007921384
JGI: 125670
UniProt: N1QAZ7
LinkDB
Position
Unknown
AA seq 909 aa
MAPKQATLGKFFGGQNAQKAEAQQAKLKFSSKVGTKEEKENLSAAPGASKSHPIDLKKED
DDDVEMKNAKVEESENDAPSVNKEASPRSSSKKRSASAEADPDDEDEEPPTKKARKPATN
GSNSDDELAENPTKKVRAPAPVEPSENQGRKSNSKRTAVPNEDDEEPVKKTLSTKKSSEA
KSIAQEQDVEEEENDKNEPSDSEAESEDSEQEDEIKPKQAAKAREKVQSTLKATSKDAYP
DWKAGDPVPYAALCTTFSKIELTTKRLEILALCSAFLRQVARLTPQDLLPTVLLMNGKLA
ADYSGIELGIGESLIMKAIGESTGRSLKIIKEDQQKIGDLGLVAAKSRQNQPTMFKPKPL
TVRGVHEGLMKIATVEGQGSQGRKVDGIKKLLSSADVNLPKGQNVDINKDKGGPSESKFI
IRALEGKMRLGLADKSLQAALSHAMVAHAVSEDGKKVPTEADLKKGEEIFKAVYNELPAY
EVIVPALLEHGIWKLRGALKLRPGVPLKPMLAKPTKSIGEVLDRFEGRDFTCEYKYDGER
AQIHYVAHDADEEFAATVAPKEGKTDRGVSNIFSRNSEDLSKKYPDILARLPSWVKKGTK
SFVLDCETVAWDVEKKHVLPFQQLMTRKKKDVKAEDIKVKVCVFAFDILYLDGEALVNKP
FRERREAMYGAFEEVEGEFAFAKFGNSREIEEIQTLLDESIAASCEGLMVKMLDGVESHY
EPSRRSQNWLKVKKDYLSGAGDSLDLVVLGAYYGKGKRTNWYGAFHLACYNSSTEQYETV
CNIGTGFSEAVLAELHETLSPLVIDRAKPFYDHSTGKNDQPDVWFEPKYVWEVKTADLTL
SPRYRAASSEFGSDGVHKGVSLRFPRFIRVRDDKKPEEATTSRQVAEMYRKQESVGKDKK
AGVDDDFEY
NT seq 2730 nt   +upstreamnt  +downstreamnt
atggcgccgaagcaagcgacgctcggcaagtttttcggcggccagaatgcccagaaagct
gaggcccagcaggcgaagctgaagttctcatccaaggtaggcacgaaagaggagaaagag
aacctgtcagctgcaccaggagcctccaagtcccatcctatcgaccttaagaaggaggat
gatgacgatgtggagatgaagaatgccaaggttgaagagtctgagaacgatgcaccgtcg
gtcaataaggaagcttcgccacgaagctcctccaagaagcgctctgcctctgcagaagct
gatcccgatgatgaagatgaagaaccgcctactaagaaagcccgcaagcccgcgacaaac
ggaagcaacagtgacgatgaacttgccgaaaacccaaccaagaaagtccgagctcctgct
cccgtagagccgtccgagaaccaaggtcgaaagtcaaattcgaagaggaccgcagtccct
aacgaagacgatgaagagcctgtcaagaagactttgtccacaaagaaatcgtcagaagcc
aagtctatcgcccaagagcaggacgtagaagaagaagaaaatgacaaaaacgaacccagt
gattcagaagctgaatcagaagactcagagcaggaagatgagatcaagccgaaacaagca
gcaaaagctcgcgaaaaggtccagagtactcttaaagccacgagcaaggacgcatacccc
gattggaaagcgggagacccggtaccttatgctgcattatgcaccactttttccaagatt
gagctcactacgaagcgtctcgagattctggctttatgctcagctttccttcgacaggtt
gcgcgactgacaccacaggatttgcttcccactgttctcctgatgaatggaaaattagca
gcagactactccggcatcgaactcggaattggtgagtctctcatcatgaaggccattggc
gagagtactggacgaagtctgaagatcatcaaggaggatcaacaaaagataggagatctt
ggtttggttgctgcaaagagccggcagaatcaacccaccatgttcaagcccaagcctctt
accgtccgcggcgttcatgaaggtctgatgaagatcgccaccgtcgaaggccaaggctct
caaggccgaaaagtggacggaatcaagaagctgctatcgtctgcagacgtgaatcttcct
aaaggccaaaatgtggatatcaacaaggacaaaggtggaccaagtgagtcaaaattcatc
atccgtgccctcgaaggcaagatgcgacttggattagccgataagagtctgcaggcagcg
ctctcgcacgccatggtggctcatgctgtctctgaagacggcaagaaagttcccactgag
gcggatctgaagaaaggtgaagaaattttcaaagcagtttacaacgaattgccggcctac
gaggtgatagtaccagccttgttagagcatggtatatggaaacttcgcggcgctctaaag
ctccggcctggagtccctctaaagcccatgcttgccaagccaacaaagtccatcggcgaa
gtacttgatcgatttgaaggaagagacttcacttgcgagtataaatacgatggagagcgt
gcccagattcattacgttgctcacgatgcggacgaggaattcgcagccactgtcgcacca
aaagaaggcaagaccgaccggggtgtctcgaacatcttctcgcgaaatagcgaggatctg
agcaagaagtatcccgacattctggcaagattgccttcatgggtcaaaaagggcaccaag
tcctttgtgctcgattgcgagaccgtggcttgggatgtggagaagaagcatgtcctgccc
ttccaacagctcatgacgcgaaagaaaaaggacgtcaaagccgaggacatcaaagtcaag
gtctgcgtgtttgctttcgacatcctctacctcgatggcgaggcgctagttaacaagcct
ttccgcgagcgcagagaggccatgtacggcgctttcgaagaagtggaaggcgaatttgcc
ttcgccaaatttggaaactcacgagagattgaagagatccagactctgcttgacgaatcc
attgccgcgtcgtgcgaaggactcatggttaaaatgctcgacggtgtagaatcgcattac
gagccttcccgtcgctcccagaattggctgaaagtgaaaaaggactacctctctggtgcc
ggcgattctctcgatctggtggtgcttggtgcatactacggaaaaggcaagcgcacgaat
tggtatggtgctttccatctggcgtgctataactccagcaccgagcaatacgaaacggtc
tgcaacattggcactggattcagtgaagcagtgctggccgaacttcatgagacattgtcg
ccgcttgtgatcgaccgcgccaagcctttctacgatcattccacaggcaagaacgaccag
cccgatgtctggttcgagccaaaatacgtgtgggaggtaaagacggcggatctgacattg
tctccccgatatcgtgctgcgagcagtgagttcggcagtgatggtgtgcataagggtgtg
tcgctcagattcccacgtttcatccgtgtgagggatgataagaagcccgaggaggctact
accagtaggcaggtggcagaaatgtacaggaagcaagagagtgtgggcaaggataagaaa
gctggtgtggatgatgatttcgaatactga

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