Pseudocercospora fijiensis: MYCFIDRAFT_126773
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Entry
MYCFIDRAFT_126773 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCFIDRAFT_126773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_126773
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCFIDRAFT_126773
mRNA degradation factors
5'-3' decay
Lsm complex
MYCFIDRAFT_126773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
19330620
NCBI-ProteinID:
XP_007921405
JGI:
126773
UniProt:
N1Q6X7
LinkDB
All DBs
Position
Unknown
AA seq
144 aa
AA seq
DB search
MQLDWTDEQQPQMFTTAAQLLDLTDKKLMVVLRDGRKLIGVLRSWDQFGNLVLQDTIERL
FVHDLYADIERGLFLVRGENVLILGEIDLDKDDYIPEPYQLAPAEKVFELKKQQDQERKK
TDKSKFKKLAELGFEGEHAGEVLF
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggattggactgacgagcaacagcctcaaatgttcacaaccgccgcccaactc
ctcgatcttaccgacaaaaagctgatggtagttctacgtgatggccgaaagctcattggg
gtcttgaggagttgggaccagttcggcaacctcgtgcttcaagacaccattgagcgattg
ttcgtgcacgacttatacgccgacatagaacgcgggctttttctcgtgcggggagaaaac
gtcctcatcctgggtgaaattgacctcgacaaggacgattacatcccagaaccatatcag
ctggcaccagccgagaaagtctttgagctgaagaagcagcaagaccaggagaggaagaag
acagacaaatcaaagtttaagaaactcgcagaactaggcttcgagggagagcatgctggg
gaggtattgttttga
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