Pseudocercospora fijiensis: MYCFIDRAFT_127785
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Entry
MYCFIDRAFT_127785 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_127785
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MYCFIDRAFT_127785
Spliceosome [BR:
pfj03041
]
Complex C
Other components
Complex C specific factors
MYCFIDRAFT_127785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
AAA_22
HA2_N
DEAD
AAA_19
AAA_30
Cas3-like_C_2
AAA_16
ABC_tran
RepD-like_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
19330660
NCBI-ProteinID:
XP_007920867
JGI:
127785
UniProt:
N1Q959
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MDHPSSFIPALHKPSSLLPIARHKHALLYTVEKYPVTVLIGQTGSGKTTQLPQYLEEAGW
CNDGKIIARQPRRVAATTVAKRVAEEMRCQLGQEVGYSIRFEDVTSAATRIKFLTDGLLL
REALVDPLLSRYSVIMVDEAHERSLSSDVLLGVLKKIRKRRPELRIVISSATLQAEDFLQ
FFANTEDTQEASDQKTTDIGRIVSVEGRAFPVDTHYLSEPCEEYLERAIKTVFDIHTTEP
EGDILIFLTGRHEIERAIEMIADRLPSLPKNSGKILPYPLYAGLTTEQQMYVFEPAPENT
RKVICSTNIAEASVTIDGIVYVIDSGFVKLRAFNPTTGIETLTATPVSKASATQRAGRAG
RTKPGKCYRLYTKEAFNSLEDATVPEIQRSNLAPTILQLKALGIDNIARFDFITPPPSEL
IIRALELLYSLGTLDDYAKLTKPLGTRMAELALEPMLAKCLLTAKTFDCLSEILTIAAMV
SLQGNVWFTHDLKKAEETARRKFAVEEGDHLTLLNVYQAFVTKGKKEAKWCQQHYLNFKS
MSRAVSIRNQLRRYLERFGIDVTESLSGNDVLKAGGRAKEESIRRCLTSGYFAHAARMQP
DGTFRTIDGGTVLHAHPSSLMFNRKADWVIFTEIMETGDKTFIRDVTKIEKSWLLEYAPD
FYKVSDTR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaccatccgagctcgtttattccggctcttcacaagccgagctcactgctaccgatc
gcgcgccacaagcatgcgctcctctacacggtggaaaagtaccctgtgacggttttgatt
ggccagactgggagtggaaagacgactcaactgccacagtatctggaggaagcaggctgg
tgcaatgatggcaagatcattgccagacagccgcgccgagtggcagcgactactgttgca
aaaagagtggctgaggagatgagatgtcagctgggccaagaagttggctattcaattcgt
tttgaagatgtcacctctgctgcaaccaggatcaaattcctcacggatggccttctcctc
agagaggcgttggtggatccgctcctctcgaggtatagcgtaattatggtcgacgaagcc
catgagcgtagcctgagctccgatgttctgcttggtgttctgaagaagattcgaaagcga
aggccagagttgaggattgttatcagctcagctacgctacaagccgaggacttcttgcaa
ttcttcgccaacaccgaggacacacaggaagccagcgatcaaaagacaacagatattggt
cgcatcgtgagtgtcgaaggtcgagcatttcccgtggacacccactatctctcggagccc
tgcgaagaatatttggaacgagcaatcaagactgtctttgatattcacacgacagagccc
gagggcgatatcctgatattcttgacagggaggcatgagatcgaaagagcgatcgaaatg
attgcagacagattgccttcgcttcccaaaaactctggcaagatcttgccatatccactg
tacgcaggtctcacgaccgagcagcagatgtatgtcttcgagccagcgccagaaaacacg
cgcaaagtaatctgctccacaaacatagcagaagcgagtgtcacaattgatggcatagtc
tatgtcatcgattctggattcgtgaagctcagagctttcaatccgactactggcattgaa
acgttgaccgcgacgcctgtgtctaaagcatcagctacgcaacgagcaggtcgagcaggc
cggacaaagcccggtaaatgctaccggctgtatactaaggaagctttcaactcgttggag
gatgccaccgtaccagagatccaacgctcgaacttggcaccgaccattttacagctcaaa
gctctgggcattgacaacatcgcacgtttcgacttcatcaccccaccgccttccgagctc
atcattcgagccttggaacttttgtattccttgggtactttggacgactacgcaaagctc
acaaaaccactaggaacaagaatggccgaacttgcacttgagccaatgctcgccaaatgc
ctcctcaccgccaagaccttcgactgcctctccgaaatactgaccatcgcggcgatggtc
agtcttcaaggcaatgtgtggttcactcacgatctcaaaaaagccgaagaaacggcaaga
aggaagttcgcggtcgaagaaggcgatcatctgacattactcaacgtctatcaagctttc
gtcaccaagggcaaaaaggaagccaagtggtgtcaacagcactatctcaacttcaaatca
atgtcccgagcggtcagcatacgaaatcagctcagacgctacctggagcggttcggcatc
gatgtcactgagtcattgagtggcaatgatgtcctgaaagcaggaggacgagcgaaagag
gaatccattcgtcgatgtctgacaagcggctatttcgcgcatgccgcgaggatgcaaccg
gatggcacattccgcaccatcgacggcggcactgtactgcacgcacatccgtcaagtctg
atgttcaacaggaaagccgactgggtgatatttacggaaatcatggagacgggagacaag
actttcattcgtgacgtgaccaagatcgagaagagctggttgctcgagtacgcacctgat
ttctataaggtgtctgatacaagatag
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integrated database retrieval system
