Pseudocercospora fijiensis: MYCFIDRAFT_132542
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Entry
MYCFIDRAFT_132542 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_132542
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
MYCFIDRAFT_132542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
EIF3I
Beta-prop_IFT140_1st
WDR55
NBCH_WD40
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_EML
VPS8_N
Beta-prop_WDR19_1st
WDR54
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
TAF1C_beta-prop
APG6_N
Motif
Other DBs
NCBI-GeneID:
19330816
NCBI-ProteinID:
XP_007924002
JGI:
132542
UniProt:
M3AQJ1
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MLSEHLVVSLGVPSKPPGTNLAPDAGIFVHEYQPLQQQRAGFTKSAAPPNGLAISDTHIF
AAQHDTGVVHVYSRARGHQEAAVAFNERISCIALACHDAVLVLGTQQGRIVLWELCTGRQ
LTTNQAHLHAVTALAVDAPSNFLLSASHDATVHVWPLPALLSFATAHIAEPEPEPLSTFS
SHHAAITALSVGHGASHANFAISFSRDRTCLVWDYRTNRILRTYLLSGIPSTAVLDAADR
IVYVGYDDGNVQPLDLCASASRDLTAVQAGTDADAAVPVQASPNTLWSLPDASYGSVISM
SASYDGTSIVTGHQSGHLLTWDVARGQASALGQRPFHAPISNLIFLPVTGFRGQHSSSKM
IRIHEIVKPKFGALNASDSGRVPANYNMHVQLSTDLNAPISAFRENVTAPTFSAALLDDG
VLELASWRKNGQQINAEAEAGEHDFMALDAPAQIERTTEQENADLKAQLRAMQNVQKKVL
EKMTKLSDERRALLKKEQSRVAKKSANGRNGFSNEDDDSSD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgagcacttggtcgtctcgctcggcgtgccttcaaagccgccgggcacgaat
ctcgcgccggacgcaggcatttttgtgcacgagtaccagccgctgcagcaacagcgggca
ggcttcacgaaatcagcagcgcctccgaatggacttgcgatcagcgacacgcacattttt
gcagcgcagcacgacacaggcgtggtgcacgtgtacagtcgcgctcggggccaccaggaa
gccgcggtcgccttcaacgagcgcatctcgtgcatcgcgcttgcctgtcacgatgccgtg
ctcgttctcggcacccagcaaggacgcatcgtgctgtgggagctgtgcacgggacgccag
ctcaccaccaatcaagcacacctgcacgccgtcaccgccctcgccgtcgatgccccttcg
aatttcctgctgtccgcctcgcacgacgccaccgtccacgtgtggccactccccgccttg
ctctccttcgccactgcacacatcgccgagcccgagcccgagcccctcagcaccttctcc
tcccaccatgccgccatcactgcactctccgtcggccacggcgcatcgcacgccaacttt
gccatctctttctcccgcgatcgcacctgcctcgtctgggactaccgcacaaaccgcatt
ctgcgcacatacctgctctctggcattccttcgaccgctgtgctcgacgcggccgatcgc
atcgtctatgtgggctacgacgacggaaatgtgcagcccttagacttgtgcgcatccgcg
agccgagacctcactgctgtgcaggctggaacggatgccgatgctgccgtgcctgttcaa
gcgtcgccgaataccctctggagccttccggacgcctcgtatggatctgtaatcagtatg
agcgcctcgtatgatggcacttccatcgtcaccggccatcaatccggccatcttctcact
tgggatgttgctcggggccaggcaagtgccctggggcagcggccttttcatgcccccata
tccaacctcatcttccttcctgtcactggattcagaggccaacacagctcaagcaagatg
atccgaatccatgagatcgtcaaaccaaagtttggtgcattgaacgcctcagattccggc
cgcgttcccgcgaactacaacatgcacgtacaactgtccaccgatttgaatgcgccaatc
tctgcctttcgagagaatgtcacagctcccacattttcggcagcacttcttgacgacggc
gtactagagcttgcttcctggcgtaaaaatggacagcaaatcaatgcggaagccgaagct
ggcgaacatgacttcatggcgctcgatgcaccagcccagatcgaaaggacgacagagcaa
gagaatgcagatctcaaggctcagttgagagcaatgcagaacgtgcagaagaaagtgctc
gagaagatgacgaagctgagtgacgaaaggagggcgctactcaagaaagagcaaagccgg
gtggctaagaaatctgcgaatgggcggaatgggttcagcaatgaggacgacgactcgagc
gactga
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integrated database retrieval system