Pseudocercospora fijiensis: MYCFIDRAFT_135121
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Entry
MYCFIDRAFT_135121 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfj03016
]
MYCFIDRAFT_135121
Enzymes [BR:
pfj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MYCFIDRAFT_135121
Transfer RNA biogenesis [BR:
pfj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MYCFIDRAFT_135121
Prokaryotic type
MYCFIDRAFT_135121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF4441
TelK_N
Ndc80_HEC
Motif
Other DBs
NCBI-GeneID:
19330956
NCBI-ProteinID:
XP_007925405
JGI:
135121
UniProt:
M3A104
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MEHSAAILEDATKNIEAAAKPGASSSSKPDGKSNDHSRDDRRSKHDDGSSRKRKGNWQDK
SLQHGSRGGGRNDNKRHKKGDMGRAEYFASNPDKRKRNAEAQEKRLRDGAQGQGIEFSKD
EIDAEERRPKRKVAVLIGYSGTGYKGMQISGTEKTIEGDLFHAFIKAGAISKANAEDPKK
TGLVRCARTDKGVHAAGNMVSLKLIVEDDDIVQKINAELSAQIRVWGIERTIGSFSCYQA
CDSRWYEYLIPSYAFLPPHPSSWLAKQLEHAADEAGDREGYESRQAEVKGFWGNVDDNDI
KAILETIDEDLRFDVVKALQGEEEASAKTAKDEADIEAPPSAGEISTGQSDAPETDRILR
LRAATKLLRNAYVAAKRRYRIPTQRVERIQNALNKYLGTKNYHNYTIQKTFKDPSVKRHI
KSFLANPKPILIGDGPEEEKTEWLSLKVHGQSFMMHQIRKMVGMVTLLVRSGGNLETMES
SFTAARYSIPKVPGLGLLLERPVFDSYNNFQAEKHDRPKLDFSKYETELEAFKEREIYQR
IFREEEENNEFSKFFNHVDNFKEPYFLYVSSKGLDATKDIVRKGGPPKEANN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaacactccgcagcaattctggaagatgcgaccaagaatatcgaggctgctgcgaag
ccgggagcttcatcttccagcaagccagacggcaagagcaacgaccactccagagacgat
cgccggtcgaaacatgatgacgggagcagtcgcaagcggaagggcaactggcaggacaag
agcctacagcatggatcacgaggtggaggacgtaacgacaataagaggcataagaagggc
gatatgggacgagcagagtattttgcgagcaacccagacaagcgcaaacgcaatgcagaa
gcgcaagagaagcgattgcgggacggcgcacaaggtcaaggcatagaattctccaaggat
gagatcgatgccgaagagcgacgaccaaagcgaaaagtcgcagtactcattggatactct
ggcactgggtacaaaggcatgcagatatctgggactgagaagactatcgaaggtgacctc
tttcatgctttcatcaaagccggcgcgatcagtaaagccaatgccgaagatcccaagaag
actggcttggtcagatgcgcgaggacagacaagggcgttcacgcggcaggtaacatggtc
agtctcaagctgattgtggaggacgatgatatcgtacagaaaatcaacgccgagctcagt
gcacaaatcagagtttggggcattgaacggaccattggcagcttctcgtgctaccaagca
tgcgatagcaggtggtacgaatacctgatcccttcgtatgctttcctaccgccgcatccc
agtagctggctggcaaagcaattggagcacgctgcagacgaagctggagaccgagaggga
tatgaaagccgacaagcagaggtgaagggtttctgggggaatgttgacgataacgacatc
aaagcaattctggagaccattgacgaggatctacgattcgatgtggtcaaagctctacaa
ggtgaagaagaagctagcgcaaaaaccgccaaagacgaggcagacatcgaggcgcctcca
tccgcaggcgagatatcaacagggcagtctgatgctccagagactgatcgcatacttcgc
ttacgtgccgctacgaagctcttgcgcaacgcttacgtagcagcaaagcgacgatacaga
attccaactcagcgtgttgagcggatccaaaacgccctcaacaaatatttgggaactaag
aactatcacaactacaccatccagaagaccttcaaggatccaagcgtcaagagacatatc
aagtctttccttgctaaccctaagccaattcttattggggatggaccagaagaagagaag
acagaatggcttagcttgaaggtccacgggcaaagctttatgatgcaccagattcgcaag
atggtcggcatggtgacattgctcgttcgctctggcggtaatctcgaaaccatggagagt
tcattcactgctgcgaggtacagcatacccaaggtaccagggttgggattgcttctcgag
cgcccagtatttgactcatacaacaacttccaagcagagaagcacgatcgtcctaaactt
gacttcagcaaatatgagactgagctggaagctttcaaggagcgagagatctatcagcgc
attttccgagaagaggaagagaataatgagttctccaagttctttaaccatgtcgacaat
ttcaaggagccttacttcttgtatgtaagcagcaagggtctcgatgccacgaaagatatc
gtgaggaaaggcggtccgccaaaagaggccaataattag
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