Pseudocercospora fijiensis: MYCFIDRAFT_135751
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Entry
MYCFIDRAFT_135751 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfj03021
]
MYCFIDRAFT_135751
03036 Chromosome and associated proteins [BR:
pfj03036
]
MYCFIDRAFT_135751
Transcription machinery [BR:
pfj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MYCFIDRAFT_135751
Chromosome and associated proteins [BR:
pfj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
MYCFIDRAFT_135751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
Spt6_S1
SPT6_acidic
Tex_central_region
HHH_9
HHH_3
SH2
B12-binding
Motif
Other DBs
NCBI-GeneID:
19331000
NCBI-ProteinID:
XP_007926085
JGI:
135751
UniProt:
M3AZG8
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MADFFDDAADVASGEEEEEEEEFDEETGEPISKSRKSNGANMDDSSEEEDDDDDEEAAAA
VREGFIVDEDDDEDVDAKATRKRERKKRRRQEREQEEELDEEDLDLIGLGAPGERREPEN
KFKRLKRGHRDNRSASETRGVEDIFSDEEDGDADVGVGRRAGFGLNDEMDDFIEQDEFPD
EEGGQLDEDLGVRAPRRGGMPDMNNLKDSGLGEIELEDMMGAFGDGAEYSWALAAEAQMN
EDGLDPDKPIELHDVFEPSQLEERMLTDRDNEIRATDVPERFQLARAPYKDTSNLPEDQA
MARNAEEAKWIASILFPRKRLDPSLREPFELALRQVLQFMNVDDFEPAFIFQNRKDYLIH
SEQIPTNGGGYTVKAEKLFTQTDLWDVFEQDLKYRAFAERRDAIQRNVELLKELETGFDD
KVFDELIPDAAQLDDLQDLQDYLNFQYSIQLKDLSISEAQENGGQKRSSGNRGFWDKVRS
GPAYHLVRAIGLTADQIAKNAEGLGHTAPDDQGETPEKIADSLIRAPDYMTSTSIIDGAK
LMMVEEIVTSPRMRKYMRQIYYKNLIFDCHRTEKGLKQISEDHPYYEFKYLRNQEVRNFL
VERPELYLRMLKAEADGLVEVRVNLKQEKDIRANLEAAIQSDNFSQVADAWNELRREIIQ
LAMKKMHKLISKGVKDNLKNECENKIAGYCRDAFTTKLDQAPYKPKGMELGTCARVLALS
NGAGNRSDAICWAYVNESGNVLENGKFTDLRPGKEDKYIPEGKDIQAFVEVVERRKPDVI
AVSGWSTETYRLYQDLKEIVKKYELRGAPYEDPDEDREVSDPLEVVIPQDEVARLYWSTP
RAETDHPSLPPLARYCVALAHYMQNPLKEYAALKRDIVSVTFDPNQNLLPEDKLRRYLET
AMVDIVNLVGVDLNEALNDPGTQNLLPFVCGLGPRKADNLIKAVAANGGEVTNRNDLLGI
GEVSKRPAVSPKVFHNCASFLYITWEDDQEADYLDNTRIHPEDYEIARKMAADALELDEE
DIKAEQEENGVSGVVRKLVKDEHTDRVNDLVLEQYAEQLETQFGQRKRATLETIRAELQN
PYEELRRNFNWLTTDELFTQLTGETRDSLQEGMIVPVSVKRTFPDHIEVKLDCGIDGGIS
ETEYPEEMAAKRIEPRQMWTQHQVIQAKLTFIERKKFTAQLTLREQEMKTPFKRVFDHGM
EEWDEQQEELDKKEAKKAAEKGQARHQRVIKHRLFKPFNSIQAIEALKTQGRGDCIIRPS
SKGSDHLAVTWKIAEDVYQHIDVLELNKENEFSVGKVLKIGKYTYSDLDELIVFHVQAMA
KKVDEMTNDERYQSGTKEATDQWLTTYTEANPKRSMYSFCMWPNYPGHFYLCFKAGQEAR
LSHWPVKVIPQGFELKGNRYPDMRALKNGFKLLMQNATNGARR
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttttttgacgacgccgccgatgtggcatctggagaggaggaggaagaagaa
gaggagttcgacgaggagactggcgagccgatatctaaaagccgcaaatcgaatggtgcc
aatatggacgactcgagtgaggaagaagacgacgatgacgacgaggaagctgcggctgct
gttcgagaaggcttcattgtagacgaggatgacgatgaagatgtcgatgccaaggcgacg
cgaaagcgcgagagaaaaaagcgacggcgtcaagagcgagagcaggaagaagagctcgat
gaggaagatttggatctcatcggcttgggcgctccaggcgagcggcgcgagcctgagaac
aaattcaagcggctcaagcgtggtcacagggacaatcgatctgccagcgagaccagagga
gttgaggacatcttttctgacgaggaagatggcgatgcagatgttggcgttggtcgccga
gcaggtttcggcctcaacgacgagatggatgacttcatcgagcaagatgagttcccggac
gaagaaggaggccaactggatgaggacctgggtgtccgagcgccgcgccgaggtggtatg
cctgatatgaataacctgaaagattctggtctgggcgagattgaactcgaagacatgatg
ggtgcgttcggagatggcgcagagtactcttgggcgctggcggcggaagctcagatgaac
gaagatgggctggatcccgacaagcctattgagttgcacgacgtttttgagccttctcaa
cttgaggagcgaatgctcacagatcgcgacaacgagattcgcgcgactgatgttcctgag
cggtttcagctcgcccgagctccctacaaggacacctctaatcttccagaggaccaggcc
atggcacgaaacgccgaagaagctaagtggatcgcgagtattctcttccctcgaaagcgc
cttgacccgagtctgagagagccattcgagctggctctcagacaagtgctccaatttatg
aatgtggatgactttgagccggcattcattttccagaatcgaaaggactatctgattcat
tcagaacagatcccgaccaacggtggcggctacacagtcaaggcagagaagctttttact
caaacagacctgtgggatgtgttcgagcaggatctcaaatatcgcgcatttgctgagcga
cgagacgcaattcagcgcaacgttgagctactgaaagagctcgagaccggctttgacgac
aaagtcttcgacgagttgattccggatgccgctcagttggatgacttgcaagatcttcaa
gattacctcaacttccaatactccatacagctcaaggatctcagcatttctgaagcacag
gagaacggcggccagaagcggtcaagtggcaaccgcggcttctgggacaaggttcgatca
ggacctgcgtatcatttggtccgcgcgattggcctcactgcagatcaaattgcgaagaac
gctgagggtcttggacacaccgctccggatgatcagggtgaaacgccagagaaaatcgcg
gattcactcatacgcgcgccagattacatgacttcaacgtcgatcattgacggagcaaaa
cttatgatggttgaagagattgtgacaagcccacgcatgcggaagtacatgagacagatc
tactacaagaacttgatcttcgactgccaccggaccgagaagggtctcaaacagatcagt
gaagatcacccatactatgagttcaagtacctccgcaaccaagaagtgcgcaactttctg
gttgagaggccggaattgtatcttcgcatgctgaaagctgaagccgacggtctcgtagaa
gtccgtgtcaacctgaagcaagaaaaagacatcagggccaatcttgaggctgctatccaa
tccgacaacttctcgcaagtagcagacgcctggaatgagctccgaagagaaatcatccag
ttggcgatgaagaaaatgcacaagctcatttccaagggcgtcaaagacaacctcaaaaat
gagtgcgaaaataagattgcgggctactgtcgagatgctttcacgaccaaactggatcaa
gcgccgtacaagccgaagggcatggagcttggcacttgcgcccgtgtgcttgcattgtcg
aacggagctggcaatcgctcagatgccatttgctgggcgtatgtcaacgaatctggaaac
gtcttggagaatggcaaattcacagacctgcggcccggcaaagaggataagtacattcct
gagggcaaagacatccaagcctttgtcgaagtcgtggagcgaagaaagcctgacgtcatc
gctgtgtccggctggtctacagagacatatcgcctctaccaggatctaaaggagatcgtc
aagaagtatgagctgcgtggcgcaccttatgaagatccagacgaggatagggaggtgtct
gaccctctggaagtcgtcatccctcaagatgaagtcgctcgactttactggtctacgcct
cgagcagagacagaccacccaagccttccgccgctcgctcgatactgcgtcgcgcttgca
cactacatgcaaaatccattaaaggagtatgcagcgctcaaaagagacatcgtgtctgtc
acattcgatccgaatcagaaccttctgccggaagacaaactacggcgctacctggagacg
gccatggttgatattgtcaacctcgttggtgtcgacctcaatgaagctctcaacgaccct
ggcacgcagaacctgctacctttcgtttgtggccttggacctcgcaaagcggacaatttg
atcaaagccgtggctgcaaatggaggcgaggtgacgaaccgcaatgatctgctcgggatt
ggcgaagtcagcaaacgtccagctgtttctcccaaagtgttccataactgtgctagcttc
ctttatatcacatgggaggatgatcaagaagccgactatctcgacaacaccagaatccac
cctgaagactacgagatcgctcgcaaaatggccgctgatgccctcgaacttgacgaggaa
gacatcaaagcggagcaagaggagaatggcgttagcggcgttgtccggaaactggtgaag
gatgagcacacagacagggtcaatgatcttgtgctcgagcaatacgctgagcagctcgaa
acgcagttcggtcagagaaagcgtgccaccttggaaaccattcgagctgaactccagaat
ccttacgaagagctgcgacgaaacttcaactggttgacgacagatgagctcttcacacag
ctgacaggagaaacccgagactctctacaagaaggcatgattgtgccggtgtctgtcaag
cgcacgttccccgaccatattgaggtgaagcttgactgtggtattgatggtggcatctca
gagaccgaatatcccgaggaaatggctgcgaagcgcatcgagccacgccaaatgtggact
cagcaccaggtcattcaggccaaattgacgttcatcgagcggaagaagttcacggcacaa
ttgacattgcgagaacaggagatgaagacgccattcaagcgggtattcgatcatggtatg
gaggagtgggacgagcagcaagaagagctggacaagaaggaagccaagaaggctgccgag
aagggacaagctcgacaccagcgtgtcatcaagcatcgtctattcaagccgttcaactcc
atacaagccattgaagcgctcaagacacaaggacgcggcgactgcatcattcgaccatca
tcgaagggatcagatcatcttgctgtgacctggaagattgccgaggatgtgtaccagcac
atcgacgttttggagctcaacaaggaaaacgagttcagtgtagggaaggtactcaaaatc
ggcaagtacacatactctgatctcgacgaactcatcgtctttcatgtccaagccatggcc
aagaaggtcgacgagatgaccaacgacgagcgctaccagtccggcacgaaggaagcaaca
gatcaatggttgaccacctacaccgaagccaacccaaaacgctcgatgtactccttctgc
atgtggccaaattatccgggccacttctacctctgcttcaaagctggacaggaagctcgg
ctgtcgcactggcctgtcaaggtcattccacaaggtttcgaactcaagggtaatcggtat
cctgatatgcgagctttgaagaatggctttaagcttctgatgcagaatgcgacgaatggt
gctcgtcgctaa
DBGET
integrated database retrieval system