Pseudocercospora fijiensis: MYCFIDRAFT_141983
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Entry
MYCFIDRAFT_141983 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_141983
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_141983
03036 Chromosome and associated proteins [BR:
pfj03036
]
MYCFIDRAFT_141983
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCFIDRAFT_141983
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MYCFIDRAFT_141983
mRNA cycle factors
Common to processing body (P body) and stress granule
MYCFIDRAFT_141983
Spliceosome [BR:
pfj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MYCFIDRAFT_141983
Chromosome and associated proteins [BR:
pfj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
MYCFIDRAFT_141983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
19331202
NCBI-ProteinID:
XP_007929031
JGI:
141983
UniProt:
M2ZLH6
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MFGSGFNGPPPGRGGGGNWGAAQTFTPRQNNWDNSPQLPRGFDRNAYGAPGGGHDRGDRG
GYSSGGRQNQGAGDGKWMDGKHVAGPANQRLERELFGVANDPTKQQTGINFEKYDDIPVE
ASGQGVPEPVTSFTNPPLDDHLLSNIDLAGYKMPTPVQKYSIPIVMSGRDLMACAQTGSG
KTGGFLFPILSQAYQNGPSGSVPQQSGFARQRKAYPTSLILAPTRELVSQIYDEARKFAY
RSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLANIKYLVLDEADR
MLDMGFEPQIRRIVEGEDMPPTEGRQTLMFSATFPRDIQLLARDFLREYIFLSVGRVGST
SENITQKVEYVEDIDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDYLINQGFPATSIH
GDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVMHVVNYDLPTDIDDYVHRIGRT
GRAGNTGISTAFFNRGNRGVVRDLIDLLKEANQEVPGFLETIAREGSGFGGGRGGRSGGG
RGRGGSAMKDVRSFGGGQRPAYAGGMMGGSGGGGGGYGGGYGGGMGGGYGMGGGMGGSYG
NPSGPSGPNSWW
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtagtggcttcaacggcccaccaccaggtcgcggcggcggcggtaactggggt
gccgctcagaccttcactccacgccagaacaactgggataacagcccacagctcccacgt
ggtttcgatcgcaatgcatacggcgctccaggcggcggccacgatcgaggcgaccgcggc
ggctacagcagtggaggacgacagaatcaaggtgcaggagacggaaagtggatggacggc
aagcacgtcgcaggtcccgccaaccagcgccttgagcgcgagctgtttggtgtcgccaac
gacccaaccaagcagcagactggtatcaacttcgagaagtacgacgacatcccagtcgag
gcttcaggtcagggtgttccagagccagtcacctccttcaccaacccaccgcttgacgac
cacttgctcagcaatatcgaccttgcaggatacaagatgccaacacctgtgcagaaatac
tcgatccccatcgtcatgagcggtcgcgatctgatggcttgtgcccagaccggttccgga
aagactggtggtttccttttcccaattctttcacaagcgtaccagaacgggccatctggc
agcgttcctcagcagtctggctttgctcgtcagcgcaaggcctacccgacctctttgatc
ctcgcaccaactcgtgagcttgtctcacagatctatgacgaggcccgcaagttcgcctac
cgatcttgggtccgcccatgtgtcgtctacggtggtgccgacattggctcccagctccgc
cagatcgagcgcggctgtgacttgcttgtcgctactcctggtcgtctcgtcgaccttatc
gagcgtggccgtatctcacttgctaacatcaagtacctggttctcgatgaggctgatcgc
atgcttgacatgggtttcgagccacaaatccgtcgcattgtggagggcgaggacatgcct
ccaactgaaggccgtcaaacactcatgttttcggccaccttcccacgcgacattcagctg
ctcgcacgcgacttccttcgagagtatatcttcctttcggttggacgtgtcggttcgaca
tctgagaacattactcagaaggttgagtacgttgaggacattgacaagcgcagcgtgctc
ctcgatatcctgcacacccatggcgccggtctgacgctcatctttgtcgagaccaagcgc
atggctgattcgctctccgactacctgatcaaccagggcttcccagcgacctccattcac
ggtgaccgcacccagcgcgagcgagagcgtgctctcgagatgttccgatctggacgatgc
ccaattctcgtcgctactgctgtggctgctagaggattggatattcctaacgtcatgcac
gtcgtcaactacgatctcccgaccgacattgacgactacgtccaccgtatcggtcgtact
ggtcgtgcaggaaacactggtatttccactgctttcttcaaccgtggcaaccgtggtgtg
gttagagacctcatcgatctcctcaaggaggccaaccaagaagttccaggcttcctcgag
acgatagcacgtgagggttctggcttcggtggtggccgtggcggtcgctctggaggcgga
cgtggccgtggcggctctgccatgaaggacgtccgtagcttcggtggcggtcagcgccca
gcctacgctggtggcatgatgggcggtagcggcggcggcggcggtggctacggaggtggc
tacggcggcggcatgggtggaggctatggaatgggtggcggcatgggcggtagctacggc
aacccatctggtccatctggcccgaacagctggtggtaa
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