Pseudocercospora fijiensis: MYCFIDRAFT_156372
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Entry
MYCFIDRAFT_156372 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_156372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_156372
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MYCFIDRAFT_156372
Spliceosome [BR:
pfj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
MYCFIDRAFT_156372
Complex C
U5 SnRNP specific factors
MYCFIDRAFT_156372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
19331853
NCBI-ProteinID:
XP_007929872
JGI:
156372
UniProt:
M3ANJ5
LinkDB
All DBs
Position
Unknown
AA seq
2202 aa
AA seq
DB search
MSSSKQGSGNADNNLNQYKYSAMSNLVLQADRRFVSRRGDDATGDPESLAGRINLGEMGS
RTSREKAPVSAATQDQARKRKRTEPVQGSRAAGILSNADMNVEGLKYRPRTAATKDVYDL
ISSEVAKKMGGDYGLSITASATDSILEYLKDPGMKDFDKKKEIDDILGITTSSKEFNQLV
NLGKKITDYDAQDEDEDMKDDEDADLDDQQGVAVDFGDEDDDENAGQTFEVRDEGEDSED
DLELGAEEAAEDGAGPPPDADGGDEEEDDGMVIESRPRRRGKEDSDPNFVPAHEIDAYWL
QRQIGQIYDDVHIQAEKTREAESIMSGVDESGEEKPLREVENDLMELFDYEHHELVGKLV
KNRDKIIWVTRWRKVAEDDASRVAFEKEMVNAGHASILKELRGRDAAPEKTGPKLQVKLD
PMQLDAKLEAKDEDEVKKEGLVGGLQPRKTLNLDDLKFDQGNHLMTNQNVRLPQGSTKRT
FKGYEEIHVPAPKRKQIPGEKPLIPTSDLPSWARTGFGTSQSLNRIQTQCYASAFEDDGN
MLICAPTGSGKTNVAMLTMLREIGKHRDPTTGEINLDEFKIIYIAPLKALVQEQVGNFGK
RLESYGITVSELTGDRQLTKQQIAETQVIVTTPEKWDVITRKATDTSYTNLVRLICIDEI
HLLHDDRGPVLESIVSRTIRRTEQTGDPVRIVGLSATLPNYRDVATFLRVDPQKDLYHFD
GTFRPCPLKQEFIGVTDKKAIKQLKTMNEVCYTKVLEQVGQNKNQMLIFVHSRKETAKTA
KFIRDKALEADTIGQIIRSDAASREILREESETVANADLKDVLPYGFGIHHAGMSRADRT
TVEDLFASGEIQVLVCTATLAWGVNLPAHTVIIKGTQIYSPEKGSWVELSPQDVLQMLGR
AGRPQYDTYGEGIIITTQAEIQYYLSLLNQQLPIESQFVSRLADNLNAEIVLGNVRTRDE
GVEWLGYTYLFVRMLRSPALYQVGADYEEDETLEQKRVDLIHSAAAVLEKASLIKYDKKT
GRFQSTDLGRVASHYYITHASMLTYNMHIQPSVSPIELFRIFALSEEFKYIPVRQDEKLE
LAKLLGRVPIPVKETIDEPHCKINVLLQAYVSRLKLEGLALMADLVYVTQSAGRILRAMF
EIALKKGWSQVAKDALDLCKMAEKRMWPTMTPLRQFPDCSPDIIKKAERMDVPWTSYFDL
DPPRMGELLGMPKQGRQVCNLVAKFPRLSLQAQCQPITRSMLRVELTLTPNFEWDDSIHG
RAESWWIMVEDCDGEDILFHDQFLLRKEYAIVEMNEHIVEFTVPITEPMPPNYFISVFSD
RWMHAESKLTLSFQKLALPDKFPPHTPLLDMQPLPVQALKREDFVGLYEQWPQFNKIQTQ
TFNALFQSDDNVFVGAPTGSGKTTCAEFALLRHFTKKEAGRAVYIAPFQEQIDAQHKSWK
ARLGPIAGGKTVVKLTGETTGDLKLLAEGDLILATPVQWDMMSRGWQRRKNVQNVSLIIA
DDLHMLGGHHGYIYEAVMSRSQAIKAQLENDLRTIGLSVSLSNARDIGEWIGCNKHTIFN
FSPNNRPLPLNLHLQTFNIPHFPSLMLAMTKPTYQAILQYAPEKPTIVFVPSRKQVRATA
QDLLAACVADDNEDRFLHAEAEELEKILAKVKERSLAESLAHGIAYYHEALSDSDKRIAE
HLFTVGAAQVMLVSRDCAWEIQSFAHLVIVMGTQFFEGREHRYIDYPISDVLQMFGKAGR
PSEDKDARGVLMCPDVKRNYYKKFLGEALPIESQLLSYMHDAFVTEISTKTIESTQDAVD
WTTYTYFYRRLLANPSFYGLTDTSHEGLSTYLSEQVEQTLKDLNDANIIDLDEEEDTITP
LNAAMIAAYYNISFITMQTLLLSLKRSTKLKGILEIVTAATEFEDVQIRRHDEHVLQRIY
DRVPVKLSEANFESPHFKAFVLLQAHFSRMQLPLDLAKDQEVILRKVLNLLSACVDVLSS
EGHLNAMSAMEISQMVVQAMWDRDSPLKQIPHFSDEKIQVCEKFGIKDVVEFQDAMDPEE
NPNHKSLMSALNFSTPELADAANFVNERYPNIDLDFELEDPDSITSGTPTSLNISLTRQL
EDDEEPNLKVHAPFYPAEKTENFWLVVGEESTRSLLAIKRVTVFRDLKTKLEVVVPTPGK
HELTLFLMCDGYVGVDQAPTFVVEVAEGMEEDEDEGDEEGGE
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtccaagcagggcagcggcaatgccgacaacaacctcaaccagtacaagtac
tctgctatgagtaacttggtgctgcaggccgacagacgttttgtttcgagacgtggcgac
gatgcgaccggcgatccagagtcactggctggaaggattaatctgggcgaaatgggctca
agaacatcgagggaaaaggctccagtctcggccgcgacacaggatcaggcgcgcaagaga
aaacggacagagcctgtgcagggttcgcgcgctgctggcatcttgtcaaatgcggatatg
aatgtcgaaggtctgaaataccgacctcggacggcggcgaccaaggatgtttatgacttg
atctcttctgaggttgccaagaagatgggcggagactatggtctgtcgatcacagcttct
gcgacagattcgatattggaatatctcaaggatcctggaatgaaggacttcgacaagaag
aaggaaattgacgatatccttggtatcacgacttcgagcaaagagttcaatcagctggtg
aatctgggcaagaagattacggattatgatgctcaagatgaagatgaggatatgaaggat
gacgaggatgcggacttggacgaccagcagggtgtggcagtcgacttcggtgacgaggac
gatgacgagaatgctgggcaaacatttgaggtccgagacgaaggcgaagactcagaagac
gatctcgagcttggcgcagaagaagctgctgaagacggtgcaggtccacctccagacgct
gatggtggagacgaggaagaggatgacggcatggtgattgaaagccggccccggcgacga
ggaaaggaagacagcgacccaaacttcgtacctgcacacgagatcgatgcatactggctg
caacggcaaatagggcagatttatgacgacgtgcatatccaggccgagaagacgcgagag
gcggaaagcattatgtctggcgtggatgagtctggagaagaaaagcccttgcgtgaggtt
gaaaatgacttgatggagctatttgactacgaacaccacgaacttgttggcaagcttgtg
aagaacagagacaagatcatctgggtcacgcgatggcgaaaggtggccgaagacgacgcg
tcgagagtcgcatttgagaaagagatggtcaatgccggacacgctagcatactgaaggag
ctgcgaggacgagatgcagctccagaaaagactggtccaaagctccaagtcaagcttgac
cccatgcagcttgatgccaagctggaagccaaggacgaggatgaagtgaagaaggaaggt
ctggtcggtggactccagccacggaagactctgaatctggacgatctgaaattcgatcaa
ggcaatcacctcatgaccaaccagaacgtacgattaccgcaagggtcgaccaagcggact
ttcaaaggctacgaggaaattcatgttccagcgccgaagcgaaaacagattcctggcgaa
aagcctctcattcccacatctgatcttccatcttgggcgcgaacaggatttggcacatct
caatccctcaaccgcattcagacgcaatgttacgcatctgcattcgaggacgatggtaac
atgctgatttgcgcgcccactggttctggtaaaacgaacgtggctatgcttaccatgctt
cgcgagattggcaagcaccgagatccaactacaggagagatcaacttggatgagttcaag
atcatttacattgcacctttgaaagctttggtgcaagagcaagtcggcaactttggcaag
cggcttgagtcgtatggcatcacggtttctgaactcactggtgatcgacagctcaccaaa
cagcaaattgcggaaacacaggtcattgtcactacaccggagaagtgggatgtcattact
cgcaaggctaccgacaccagctacaccaacctggttcgcctaatatgtattgacgagatt
catcttctccatgatgatcgtggtccggtcctggagagcatcgtgtctcgaacaatcaga
cgaacagaacaaactggcgatcccgtccgtatcgttggtctatcagctactctgcctaac
taccgagacgtagctactttccttcgagttgatccacagaaagacctctaccacttcgac
ggcaccttccgaccttgccctctcaagcaggagtttatcggcgttacagacaagaaggct
atcaaacagctcaagaccatgaacgaggtctgctataccaaggtcttagagcaagttggg
cagaacaagaaccagatgctgatcttcgttcactcaagaaaagagactgcgaagactgcg
aagttcatccgagacaaagcccttgaggcagatacgattggacagatcattcggagcgat
gcggcaagtcgagagattctgcgagaagagtcggagaccgttgccaacgctgaccttaag
gatgttcttccctacggctttggtattcaccatgctggtatgagcagagcagatcgaacc
acagtagaggatcttttcgcatctggtgagattcaagtcctggtttgcactgcgacactg
gcgtggggtgtcaatttgccagcgcatacggtcatcatcaaaggaacgcaaatctactca
cccgagaaaggttcctgggtcgagctcagtcctcaggatgtgctgcaaatgcttggccgt
gctggtcgtccacagtacgacacctatggagaaggtatcatcatcaccacacaggcagag
attcagtactacttgtctctgctcaaccagcaattaccgattgagtcgcaatttgtgtcg
agattggcagacaatctgaatgctgagatcgtgcttggcaatgtccgaactcgtgacgaa
ggcgtggaatggcttggatacacttatcttttcgtacggatgctacgttctccagcactt
tatcaagttggcgcagactatgaagaagacgaaacgctcgaacaaaagcgcgttgacctc
atccactctgctgcggcggttctggagaaagctagtctgatcaagtatgacaagaagaca
ggccgcttccagtcaaccgatcttggccgagtcgcaagtcattactacatcacgcatgcc
agtatgttgacttacaacatgcatatccagccatccgtcagccccattgagcttttcagg
atttttgctctcagcgaagagttcaagtacattccggtgagacaggatgagaagctcgaa
ttggcaaagcttcttggccgagtacctatccccgtcaaggagaccattgatgagccacat
tgcaagatcaatgtgcttttgcaggcatacgtgagcagactgaagttggaaggcctagcc
ctgatggcagatcttgtctacgttactcagtctgcaggccgtatcttgagagccatgttc
gaaattgcactcaagaaaggctggtcgcaagtggccaaagatgcactggacctgtgtaaa
atggcagagaagcgcatgtggccaacaatgacacctctgcggcaatttccagattgctcg
ccagacatcatcaagaaggctgagcgaatggacgtgccatggaccagctatttcgacctc
gatccacctcgaatgggtgagcttctgggcatgcccaagcaaggacgacaagtatgcaac
ctggtcgccaaatttcccagactgagtctccaggcacaatgtcagcccatcactcggtcc
atgcttcgagttgagctgacgttgacgccgaacttcgagtgggatgattcgatccatggc
cgcgctgagagttggtggatcatggttgaggattgcgatggagaagatattctctttcac
gaccagttcctcctgcgtaaggaatacgccattgtggaaatgaatgagcatatcgtcgaa
ttcacggtgcccatcaccgagccgatgccaccaaactatttcatttctgtcttcagcgac
aggtggatgcacgcagagagcaagcttacactgtccttccaaaagttggccctacccgac
aagttcccaccacacacgcctctgttggatatgcagcctttgccagtgcaggctttgaag
cgggaagatttcgttggcctttatgagcagtggccacaattcaataagatccagactcag
acgttcaacgcgctattccagtctgacgacaacgtcttcgttggtgcgccgactggcagt
gggaagacgacttgcgccgagttcgcactgttgagacactttacgaagaaggaagcgggc
agagcagtatatattgcgccattccaagagcaaatcgatgcgcagcacaagtcgtggaaa
gccagactaggcccgatagctggaggcaagaccgtcgtcaagcttactggtgagaccacg
ggcgatctaaagctgttggcagagggtgatcttatccttgctacgccagtgcaatgggac
atgatgtctcgaggctggcaaagacggaaaaatgttcagaacgtcagcctgatcatcgca
gacgacctgcacatgctcggtggacatcacggctacatctacgaggcagtcatgtcaaga
tcgcaggctatcaaagcacagcttgagaacgacctgcgcacgatcggactgagcgtgtct
ctctcgaacgcgcgagacattggcgaatggatcggatgcaacaagcacaccatattcaac
ttcagcccgaataaccgaccgctgccactcaatcttcacctgcagaccttcaacattcct
cacttcccgtcgctcatgctggctatgaccaagccgacgtaccaggctatcttgcagtat
gcaccagagaagccaacgatcgtctttgtgccaagcaggaaacaggttcgagctactgca
caagatctcctggcggcttgtgttgcagacgacaatgaagacagatttttgcatgctgag
gcagaagagctcgagaaaatattggcgaaggtcaaagagcgaagccttgcagagagcttg
gctcatggtattgcttactaccatgaagctctgtcggattcagacaagcgcatcgctgag
catctattcacggtaggtgctgcgcaggtcatgctggtctcgagggactgcgcttgggag
atccagagctttgctcatttggtgatcgtcatgggtacacaattcttcgaaggccgagag
catcgatacattgactatcccatcagtgacgtgctgcagatgtttggcaaagctggacga
ccctcagaagataaagacgcacgtggagtgctgatgtgtccggacgtcaagcgcaactat
tacaagaagtttcttggcgaggcactgcccatcgagagtcagttgctcagctatatgcat
gacgcattcgtcacagagatcagcaccaagaccatagagtcaacgcaagatgccgtcgac
tggactacttacacatacttctaccgacgacttctggcaaatccaagcttctacggcttg
acagatacttcgcacgaaggcctcagcacatacctctccgaacaagtggagcagactctc
aaagacctcaatgatgccaatatcatcgatctcgacgaggaagaagacacaatcacgccg
cttaatgccgccatgattgcagcttactacaacatctccttcatcacgatgcagacactt
ctgctttcactcaaacgtagcacgaagctgaaaggcatccttgaaatcgtcactgccgcc
accgaatttgaggacgttcaaatcagacggcacgacgagcacgtcctgcaacgcatctac
gatcgcgtccccgtcaagctttccgaagccaactttgaatcaccacacttcaaagccttc
gtcctcctccaagcccatttctcccgcatgcaactccctctcgacctcgccaaagaccaa
gaagtcattctccgcaaagtcctcaacctcctcagcgcctgcgtcgacgtcctctcctcc
gaaggccacctcaacgccatgtccgccatggaaatttctcaaatggtcgtccaagccatg
tgggaccgcgactcccccctcaaacaaatcccacacttctccgacgaaaaaatccaagtc
tgcgaaaaattcggaatcaaagacgtcgtggaattccaagacgccatggatcccgaagaa
aatccaaaccacaaatccctcatgtccgctctcaacttctctacacccgaactcgccgac
gcggcgaatttcgtcaacgaacgataccccaacatcgatctcgacttcgaactcgaagat
cccgattccatcacttccggaactcctacatccctcaacatctctctcacacgtcaatta
gaagacgacgaagaacctaatctcaaagtccacgcccccttctatcccgcggagaaaact
gagaatttctggcttgtggtgggagaggagagtacgaggagtttgcttgcgatcaagagg
gtgacggtttttagggatttgaagacgaaattggaagttgtggtgccgacgcccgggaaa
catgagttgacgctgtttttgatgtgtgatggttatgttggggttgatcaggctccgact
tttgttgtggaggttgcggagggcatggaggaggatgaggatgagggggatgaggagggg
ggtgagtag
DBGET
integrated database retrieval system
