Pseudocercospora fijiensis: MYCFIDRAFT_157688
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Entry
MYCFIDRAFT_157688 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14781
ATP-dependent RNA helicase DHR2 [EC:
5.6.2.6
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_157688
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MYCFIDRAFT_157688
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
Helicases
MYCFIDRAFT_157688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
HA2_N
nSTAND3
AAA_29
EFG_III
ABC_tran
RsgA_GTPase
AAA_16
ResIII
PIN_8
AAA_25
TsaE
Motif
Other DBs
NCBI-GeneID:
19331914
NCBI-ProteinID:
XP_007931428
JGI:
157688
UniProt:
M2YIM5
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MKSAPLDTSAGQKRKRDEGKKNSTPMKKRKTQLDAQRQALPIYPRAKEIRQSLKDHNVLV
LTGETGSGKSTQVPQFLLESPWCTGKIAVTQPRRVAAINLARRVADEMGSPLGRSSPASK
VGYSVRFDDNTSASTKIMFLTEGMLLQEILRDPALKEYSCVVVDEVHERSVDVDLILGFL
KVLLDDEERKRMGRPLRVVVMSATADADGLMRFFERKGVDEEATFENGSEGIIQNGNDSK
VSRCHVEGRQYPVKTHYLDSPTPDYLDTALHRIYQIHCKEAMPGDILVFLDGAEAIKSLQ
KSVEEFAGHLTTDFPRMLVLPLYAKLPQHAQQLIFERAPPNTRKVILSTNIAETSVTVPG
VRFVVDSGRFKMKQFRSKLGLESLLAKPISKSSAEQRKGRAGREAAGQCYRLYTESTYKD
LEKDTKPEILHCDLSNAILKMKARGVDDILNFPFLTAPPLEALQRSLNHLVNLSCLEAQT
GTITPLGQKVARLPLPPQLGVVLIESSKPSRSCLNEVIDIISCLSVEDIWLPIHNNNETN
ESILQARSHLHRREGDLLTYLAAVQTYTNDSTTSDRKLWCKNHAISHSAMKAVMDVRKQL
RTQTKSLSSSTLPSSSSSENLNENILKCFLIGYKSNIAILCPDNSYKTALSKQVVAIHPS
SVLAERERRDRGKKMEGIVFCDFVFTQKAYARNVSAIQLQWLDEI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggcaccactggatactagtgccgggcagaagcggaagcgagatgaagggaag
aagaacagcaccccaatgaagaaacgcaagactcagctggatgcacaacgacaagccctt
ccaatatatcctcgcgcaaaagaaatccgacaatcgctcaaagaccacaatgtcctcgtt
ctaactggagaaaccggaagcggaaaatctactcaagtcccccaattccttctcgaatca
ccatggtgcaccggaaaaatcgccgtcacgcaaccgcgtcgagtcgcagctatcaacctc
gctcgtcgagtagcggacgaaatgggctcacctctcggacgctcctccccagccagtaaa
gtcggctatagtgtacgatttgacgataatacgagtgcgagcacgaaaatcatgtttttg
actgagggaatgctgttgcaggaaattttgagggatccggcgctgaaggagtattcttgt
gttgtggttgatgaggtgcatgagcggagtgtggatgtggatcttattcttgggtttttg
aaggttttgcttgatgatgaggagaggaaaaggatggggaggccgttgagggttgtggtt
atgagtgctacggcggatgctgatgggttgatgcgattctttgagcggaaaggggttgat
gaggaagcgacttttgaaaatggaagcgaaggcatcattcagaatggaaacgactcgaaa
gtctcccggtgccatgtcgaaggaagacaatatcctgtcaagacgcactatcttgacagc
ccgacaccggattacctcgacacagcactgcatcgcatatatcagattcattgcaaagaa
gctatgccaggagatatcctggtgtttctcgacggcgccgaagcgatcaagagtctccaa
aaatccgtggaggagttcgctggacatttgacgaccgactttccgagaatgctggtgctt
ccactctatgcgaagttgccgcagcatgcacagcaactgatatttgagcgagcgccaccg
aatacgcgaaaggtcatactatccactaatattgctgagacttcggttacggtgcctggc
gtgcggtttgtggtggatagtggaagattcaaaatgaagcagttcaggtcgaagttgggg
ctggagtcgcttctggcaaagccgatttcgaagtcgtctgcagaacagaggaagggtcga
gccggtcgtgaagcagccggtcaatgctatcgcctctatactgaatcaacctacaaagac
ctcgaaaaagacacaaaaccagaaatcctacactgcgacctcagcaacgccatcctcaaa
atgaaagcccgcggcgtagacgacattctcaacttcccgttcctcaccgcaccacccctc
gaagccctccaacgctctctcaaccacctcgtcaacctctcctgcctcgaagcacaaacc
ggcaccataacccctctcggccaaaaagtcgcccgcctgcctctcccaccccaactcggc
gtcgtcctaatcgaatcctccaaaccttcccgctcctgcttaaacgaagtaatcgacatc
atctcctgtctctccgtcgaagacatctggctcccaatccacaacaacaacgaaaccaac
gaatccatcctccaagcccgctcccacctccaccgccgcgaaggtgacctcctcacctac
ctcgccgcagtccaaacctacacaaacgactccacaacttccgatcgaaaactctggtgc
aaaaaccacgcaatttctcattcggctatgaaagccgtcatggatgttaggaaacaatta
cggacacaaacaaaatccctctcctcttccaccctaccctcctcctcctcctccgaaaac
ctcaacgaaaatatcctaaaatgcttcctgatcggctataaatccaacatcgcgattcta
tgtccggacaattcttacaaaactgcgctttcgaaacaagttgtggctatacatcctagt
tcggtgttggcggagagagagaggagggatagaggcaaaaaaatggaggggattgtgttt
tgtgattttgtgtttacgcagaaggcgtatgcgaggaatgttagtgctatacaactgcag
tggttggatgagatttga
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integrated database retrieval system
