Pseudocercospora fijiensis: MYCFIDRAFT_159726
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Entry
MYCFIDRAFT_159726 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCFIDRAFT_159726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_159726
03016 Transfer RNA biogenesis [BR:
pfj03016
]
MYCFIDRAFT_159726
Enzymes [BR:
pfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MYCFIDRAFT_159726
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
MYCFIDRAFT_159726
Transfer RNA biogenesis [BR:
pfj03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
MYCFIDRAFT_159726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
Luciferase_N
Motif
Other DBs
NCBI-GeneID:
19331986
NCBI-ProteinID:
XP_007921504
JGI:
159726
UniProt:
N1QBE6
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MKNDNQPKFAEVISSDEEDSGDASNEAEGDQGPSRKRAKADEQTSEPARPKWSNPDPYSV
APPTDLGLQPKKDIVQSIRKAKVEAAQKASITNAIKENVDFISFDMDDDQEDDSSDGNDD
DFVGAPLDDIPPPPPDDIPPPPPPDDLIMPTDQELMSNYVGGKNKRKRGVEQQQRFSAGH
IVDDWLTSDSDPTPWAPANGYDFAANVGLHLHREILDFFDYVSPRDYEKNCREDLVKRVD
YFISGFGRGRSISVQPFGSYASGLYLTDADIDLVATSSQYMRNGTKVFCQSRTQMNKLSN
ELRKTGMAKNRDVITLTRTKVPLIKFVDSRTNIKVDISFENDSGLNTIPTLLAWKQQFPE
MPVLVAIIKQFLAMRGLNEVHTGGIGGFTIICLVVSMLQLKPDLQARSQASYGELMLDFF
DLYGNKFDIRTTGIRMKPPGYFSKTQNMGIDMNMDRLTIMDPDKPEHDISGGSAKIDLVL
QCFKGAFSMIQHELDQLRKGSGNSTRSVLGCILGGNYSSFEDLRDNLHDLNKQQTAPPPP
PPAQYYNNYAPPPPPAARPPLYHDYAQPPPRYPLRHALPTRPAPPTGTTPLVAQAPSKAK
KPKKLKAKKKAKQPVASSSAAAASTEPVAGGGLSASKIEKRKQKKQKKMKKAKKGSKD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgacaatcagccgaagtttgccgaggtgatctctagcgacgaggaagactct
ggagacgccagtaatgaagcagaaggtgaccaaggcccttcacgcaagcgcgcgaaggcg
gatgagcaaacatctgagccagcacgtccgaagtggtccaatccggatccttactcagtc
gcaccaccaaccgacctcggattgcagcccaagaaggacatcgtgcagagcattcgcaag
gccaaagttgaggcagcccagaaggcttcaatcaccaatgctatcaaggagaatgtagat
ttcatctctttcgacatggatgacgaccaggaggacgactcttctgacggtaatgatgat
gactttgttggtgctccacttgatgacattccgccacctccacctgatgatattccgcca
cctccaccaccggatgacttgatcatgcctactgatcaggagctcatgtcgaactacgtc
ggagggaagaacaagcgcaagcgtggtgtcgaacagcagcagcgcttctccgctggtcac
attgttgacgactggctcacaagcgactcagacccgactccttgggctccagctaacggc
tacgacttcgcggcaaacgttggtttacacttgcatcgggaaatcctcgatttcttcgac
tatgtctcgccgagagattatgagaagaattgtcgtgaggacttggtgaagcgcgtcgac
tacttcatctctggattcggacgcggacgttcgatcagcgttcaacccttcggctcctat
gcctctggtctctacctgaccgacgctgacatagacctcgttgccacatcgagtcagtac
atgcgcaatggtaccaaggtcttctgtcagtccaggactcaaatgaacaagctttccaat
gagctccgcaagactggaatggccaagaaccgcgatgtcatcacacttaccagaaccaag
gttccccttattaagtttgtcgacagcaggaccaacatcaaggttgacatctccttcgag
aatgactccggcctgaacacaattccaaccttgcttgcttggaagcagcaatttccagaa
atgcccgtcttggtggctatcatcaagcagttccttgctatgcgcggcctcaacgaagtc
cacaccggtggtataggagggttcacaatcatctgcttggtggtcagtatgttgcagctg
aagcctgatcttcaagcccgttctcaagctagctatggcgagctcatgctagacttcttc
gacctttacggcaacaagttcgacattaggaccaccggcatcaggatgaaacctccaggc
tacttcagtaagacccagaacatgggcatcgacatgaacatggaccgactgaccatcatg
gatcccgacaaaccggagcacgacatttcaggcggctccgccaagattgacctcgtcctg
caatgcttcaaaggcgcattctcgatgattcaacatgagttggatcagttgcggaaaggg
tccggcaacagcactcgcagcgttttgggctgcattttgggtggaaactacagttctttc
gaagatctgcgcgacaacctccacgacctcaacaagcaacagactgcaccgccgccacct
ccgccggcgcagtactataacaactacgctccgcctccgccgcctgcagctcgcccaccg
ctctaccacgactacgcccagccgcctccacgatacccgttgcggcatgcgttgccaacc
cgcccggcaccgccgaccgggaccacaccgctggtagctcaagccccttctaaagccaag
aaacccaagaagttgaaggccaagaaaaaggccaagcagcctgtggcgagcagttctgct
gccgcagcatcgacagagcctgttgctgggggtggtttgtcagcatcgaagatcgagaaa
cgaaaacagaaaaagcagaagaaaatgaagaaggcaaagaagggatcgaaggactga
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