Pseudocercospora fijiensis: MYCFIDRAFT_168435
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Entry
MYCFIDRAFT_168435 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCFIDRAFT_168435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_168435
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MYCFIDRAFT_168435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
19332270
NCBI-ProteinID:
XP_007931599
JGI:
168435
UniProt:
M3AL15
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MSAALTAASATRLPHDKVGQLEDRIKDDPKGDTEAWLALIQHYVDKDQYQQARDIYARFF
KVFPTAVSMYIKRIQMENDLDERDQVAVMLNESLMNLPNVDIWKFYLDHVRRALPLINDT
SGQNRGEILKAFELTLEHVGIDPDAGIIWSEYIEFIKDGPGRIGETGWQDLQKQDTLRKA
YQRAVKLPHSDFMRLWKEYETFEMGLHKANGRKHIQEQSAHYMQARTAKMQLEQKLAGLD
RKSFPRLPPIYGCQGEDEFGTQVEKWRSWVAWERDEDPLAYKDGSSGSSEEDKWRQRVLY
VYKQATMALCFYPEIWFEAASWCFTLGLEDMDNEGKAFLDKGMAANPESVLLAMMKADRV
ESSLESGNTDEVLIRNGEKLDAPYEAVHTALYALRSKTQEKDKRAVAQIQEHFASLPPED
EPIHPPGEDDDSDIEDKPKSREEQMKEQIDAVKAASAQHMDIIKRTISYVWVAKMRAFRR
VQGQGKPTKKGDNNTKVVKGFRGIFGDARPRGPLSSDVYIASALMEWLCYRDQSAVKIFE
RGMKLFPTDEAFILEYIKHLISIGDITNARVVFESTLPKITGSAEFSDLQKKDKCRALIV
YMHDFESKYGDLAQIHKIEKRMSELYPDEPEISRFSGRFSLPTFDAMNVQLVLSPTQAQP
KVYDPAQLAAQASAAAHTIVSIEAPRQVREGTAGPEILLGPNGPYVASPKRPLDDSDADT
PQRKFMRGESPMKTSTTAVLGSGQGAVRMVSQSTGAGGKGGFATKTFVPANAPLPTQPPA
AAPPGFPPSLFSAPPLPPQVDAILRLLPSAAAYGATQRFDPAKIVSFVPTLPVEQKRALF
QAGQLHLSRR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcccttaccgctgcgtctgctacaagattgccacatgacaaagttggccaa
cttgaagatcgcatcaaagatgatccgaaaggcgacactgaagcatggctcgcgctcatc
cagcactatgttgataaggaccagtaccaacaagcgagagatatctacgctcgtttcttc
aaggtcttcccaacagcggtctcaatgtacatcaagcgcattcagatggagaatgacctt
gacgagcgcgatcaagtcgctgtgatgttgaacgagtcgctgatgaatttgcccaatgtc
gatatctggaagttctacctcgatcacgtccgccgagcgctacctctgatcaacgacaca
tccggacagaatcgcggtgagattctaaaagccttcgagctgacgctggagcacgtcggc
atcgacccagacgctggtatcatctggagtgagtacattgagttcatcaaggatggacca
ggaagaataggcgagaccggctggcaagacctccagaagcaagatactctgcgaaaagca
taccagcgagcggtgaagctacctcactcggacttcatgcgattgtggaaagagtatgag
acatttgagatgggactgcataaggcgaacggccgaaaacacattcaggagcagagtgca
cactacatgcaggcacgcacggcgaagatgcagctggagcagaagctcgccggtctcgac
cgcaagtcgtttccgcgcttaccacccatctacggctgccagggagaagatgagttcggt
acgcaagtcgagaaatggcgctcctgggttgcttgggagagagacgaagatccgcttgcg
tacaaggatggatcgagcggatcgtcggaagaagataagtggcggcagagagtgctctac
gtctacaagcaagccactatggctctctgcttctaccctgagatctggttcgaagctgcg
tcatggtgctttacacttggcctggaagacatggacaacgaaggcaaggcattcctcgac
aagggcatggctgctaatcccgagtccgtgctgctggcgatgatgaaagctgatcgcgtt
gaaagctcactggaatctggcaacaccgacgaggtcctcatccgtaatggcgagaaactg
gatgctccctatgaagccgtgcacaccgcgctctatgctctacgctcgaagacccaagag
aaggacaagagagctgttgcacagatccaggaacacttcgcctcactgccacctgaggat
gaacctatccacccgcctggtgaagacgacgattcggatattgaagacaagcctaaatcg
cgcgaggagcaaatgaaagagcaaatcgatgctgtcaaagctgcttccgctcaacatatg
gacatcatcaagcgaacgatatcttacgtgtgggtggcaaagatgcgcgctttccggcgc
gtgcaaggtcaaggaaagccgaccaagaagggtgataacaataccaaggtggtaaaaggt
ttccgaggcatctttggtgacgcacgacctcgaggcccgctcagcagcgatgtctatatc
gcatctgctttaatggagtggctgtgctatcgagatcagtctgcagtgaaaatttttgag
cgtggcatgaagctcttccctaccgacgaggcgttcatccttgaatacatcaagcatctg
atcagcatcggagacatcacaaatgcaagagttgtgtttgagtcgactttaccaaagatc
actggctctgcagagttctcagacctgcaaaagaaggacaagtgcagagcactcatcgtc
tacatgcacgacttcgaaagcaagtacggcgaccttgctcaaatccacaagatcgagaag
aggatgtcggaactctatcctgatgagccagagatttctcgtttcagtggccgatttagc
ctgccaaccttcgacgccatgaatgttcaactagtgctatcgcccacccaagcacaacct
aaggtctacgatcctgcgcagctcgctgcccaagccagtgctgctgcacataccatcgta
agcattgaagctccacgccaggtcagagaaggcacggccggaccagaaatccttctcgga
ccaaatggaccatacgttgcatcgcccaagcgaccgcttgatgatagcgacgctgacacc
cctcagcgcaagttcatgcgcggtgagagtcccatgaaaacatctacaaccgccgttttg
ggttctggtcaaggtgccgtgcgaatggtcagccagtccacaggtgcgggaggcaaagga
ggatttgcgaccaagactttcgtgcctgcaaatgctccactccctactcagccaccagcc
gccgctccgccaggctttcctccatcactgttctctgcaccaccattaccgccacaagtc
gatgccatactgcgccttctccccagcgcagctgcatacggcgccacacaacgcttcgat
cctgccaagatcgtcagttttgtgcctacattaccggttgagcaaaagcgagccctcttc
caggccggacagcttcatcttagtaggaggtag
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