Pseudocercospora fijiensis: MYCFIDRAFT_177042
Help
Entry
MYCFIDRAFT_177042 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MYCFIDRAFT_177042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_177042
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MYCFIDRAFT_177042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
WD40_WDHD1_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR41
WDR55
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
WD_LRWD1
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_RIG_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_NOL10_N
CagA
WDR54
Motif
Other DBs
NCBI-GeneID:
19333674
NCBI-ProteinID:
XP_007929126
JGI:
177042
UniProt:
M3A617
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MAYKAETKTTFDVTRVIQPIYTGGAVSLSQNGRILASTLGEEALLTDLNTGAHLARIEGV
SLRLTVDTSDQDGDALTTLILTPDASHLVLCSRSLSMRIYALQHSALHHEIDAKLVRTVK
PHTTPVVTLAVHSTSSLLATGGADGVVKVWDIRAGFVTHTFRGHSGVVSALCFFHSDSEE
ETKSVKSKKRKSRQRDDEPQEMQNEETSGFRLASGGEDGRVRIWNLHTGRGVAMLESHAS
VVRSLHYSPEQKLLLSASRDKTVILWDSKTWQQAATIPVLEIVESSGFVHGGRFIYTGGE
RARLRIWNVQTGAELSEDQEEGAEIEGIVDVQHHSQLSFLLTVHADQTLVLRSLETLVHA
SASQRIPPLPILRRISGTHDEVIDLAYIGRSRNHLALATNLEDIRIISVDTKLSPSADSP
YFGGDVALLKGHSDIIITIDTDWSGCWLATGAKDNTAKLWRLDVENGSYTCHATFTGHAE
SIGAVALPNASPAVGSKEYDHPLEHPPKYLVTGSQDKTIKKWNVSTSRAAYTHKAHDKDI
NAIETSYSTSHPLFASASQDRTVKIWDVDTGEAIGVLRGHKRGVWTVAFSPPGMPSLTTG
DSGNASSAKGMVLTGSGDKTVKIWSLADYSCLRTFEGHINSILKVVWLPPPKKGGSIGCG
VQVVSAAGDGLVKVWDAQTSECAATLDNHIDRVWALAVKPASILNANQDKTLVLKADKEE
ADDPTNTLQLELVSGSADSTLTFWTDTTTATALAATTVATQRIKQDQELQNAIRASNYRE
AIVLALQLNHPKRLLDLFSSVVDTATPDSGSFTGRNEVDEVLASLSDTQLWNLYRRTRDW
NSNGRTAHVAQRVLAAMYHIFPKEKLLHLNRRRKAAVPQEEEDELSAAMAQLTAQDKMKS
KESVKDVNDALKAYTERHYQRLEKTSEERYVLLWAVRQMDDVSAAGGNAFLSNGRVDRL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcctacaaggcggagacgaagaccactttcgatgtgaccagagtcatacagcccata
tatactggtggtgcggtctcactcagccaaaatggccgcatactcgcatcaacattaggc
gaggaagcactcctcacagacctcaacactggagcacatttggcgagaatagagggcgtg
agcttgcgactgactgttgacacaagtgatcaggacggcgacgccctcaccactctgatc
ctcacgcccgacgcatcgcaccttgtactatgctcgcgatcgctttccatgcgaatatat
gccttacagcattctgcgctgcaccacgagatcgatgctaagctagtgcggaccgtcaag
ccgcacaccacacctgtagtcacgctcgctgtacattcaaccagctctttgctcgcgacc
ggaggtgcagatggcgtggtgaaagtctgggacattcgcgcaggcttcgtgacccacaca
ttccgcggtcatagtggtgttgtctcggcactttgtttctttcactccgactcggaagag
gagacaaagtctgtgaagagcaagaagcgaaagagcagacagcgggatgatgaaccacaa
gagatgcagaatgaggagacttcgggattcagacttgcttcaggcggagaagacggacgt
gtgaggatatggaatctccatacagggagaggcgtggcaatgctggagtcgcacgcgagt
gtggtgcgctcgttgcattactcccccgagcagaagttgctgctatctgcaagcagagac
aagactgtgattttgtgggattcgaaaacttggcagcaagcagcaacgattcccgtgctt
gagattgtcgagagctccggctttgttcacgggggacgcttcatctataccggtggcgag
cgtgcgagattgcgcatttggaacgtgcagacaggagccgagttgtcagaggatcaggaa
gagggcgctgagatcgagggcatcgttgatgtccagcatcattcgcagctttcttttctg
ctcactgtgcacgcggatcaaactttagtgctcagatcactggaaacgctagtacatgca
tcagcttcacagcgaatacctcctttaccgatactgcgacggattagtgggactcacgac
gaggtcatcgatttggcatacatcggtcgcagccgcaatcaccttgcgctagccaccaat
ctcgaagacatacgaatcatctctgtggacacgaaattgtctccgagtgcagactctccg
tattttggcggagacgtcgctctcctgaaaggacattcggatatcatcatcaccattgac
accgactggtcaggctgctggcttgctactggtgccaaggataacaccgcgaagctttgg
cgacttgatgttgagaacggctcatacacttgccatgcgacctttactggacacgctgag
agcatcggagcggtagcattacccaatgcctctcctgcagtagggtcaaaggaatacgac
catcctctcgaacacccgccgaaatacctcgtcaccggcagccaagacaagactatcaag
aaatggaatgtgagcacttcacgagcggcttacactcacaaagcgcatgacaaggacatc
aacgcaatcgagacctcgtattcgacgtcgcatccgctcttcgcttctgcttcacaagat
cgaacagtaaagatatgggatgttgacacaggtgaggccattggtgtcttgagaggccac
aagcgcggggtctggaccgttgcgttctcgcctcctggcatgccgtcattgacgactggc
gacagcggcaatgctagcagtgccaaaggcatggtcctgactggaagcggagacaagaca
gtcaagatttggagcttggctgattacagctgcttacgaacatttgagggtcacatcaat
agtatcctgaaggtcgtttggctccctccacccaagaagggcggtagcattggttgtgga
gttcaagtggtaagtgcggcaggtgatgggttggtgaaggtgtgggatgcgcagacctcg
gaatgtgctgcgactctcgacaaccacattgatcgtgtatgggctttggcagtcaagcca
gcgtcaatactgaacgcaaatcaggacaagactcttgtgctgaaggcagacaaagaagag
gccgatgatcctaccaacaccttgcagcttgagcttgtctctgggtctgcagacagcacg
cttacattttggaccgatacaacgaccgccaccgccctcgccgccaccacggttgcgaca
cagcgtattaagcaagatcaagagcttcagaatgcgatccgagcaagcaactatcgcgaa
gcgatcgttcttgcgctacagctcaaccatccgaaacggctactcgatctattcagctct
gtggtcgatactgccacaccagactcgggaagtttcaccggtcgcaatgaggtggacgag
gtccttgcctctttgagcgacactcaattgtggaatctttaccgccgcaccagagactgg
aattccaacggccgcactgcacatgtcgctcaacgtgtcctcgccgcgatgtaccacatc
ttcccaaaagagaagctgcttcatctcaaccgacgacgaaaggctgccgtgccgcaagag
gaggaagacgagttgagtgccgccatggcgcagcttactgcccaggacaagatgaagagc
aaggagagtgtgaaagacgtcaatgacgcgctgaaagcatacaccgaacgacattatcag
cgactagaaaagacaagcgaagagagatacgttctgctttgggcggttcggcaaatggat
gatgttagcgcagctggtggtaatgctttcctcagcaacggccgcgtagaccggctttaa
DBGET
integrated database retrieval system