Pseudocercospora fijiensis: MYCFIDRAFT_185566
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Entry
MYCFIDRAFT_185566 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_185566
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
Other 90S particles
MYCFIDRAFT_185566
Pre-60S particles
Other pre-60S particles
MYCFIDRAFT_185566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
F_actin_bind
Motif
Other DBs
NCBI-GeneID:
19334804
NCBI-ProteinID:
XP_007921908
JGI:
185566
UniProt:
N1QCN4
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MALQERLDKIRSSPKLQNQQQASVVLKAVDETLQAQKTDPTPTAYFAALLSLLGQYISSE
KGIVKKEFATSVVYLLDLVTSHVPAPLLRSKFPQILNSLAPALAHQDADAPLLRASVGCL
ESLLIAQDTQAWALPQSPTSPRGAVGGLLALTVDHRPKVRKRAQDALSNVLKQPPPSPSL
DHPAADMCAETALRHLQNAAEQASGKKKKQRHRDESQHDPSLMHALQLVKTVASAQNGWP
SRKIDALCELLLNISKGSNEFLTMAAFDIFEIIFAGLADEVSSSKLPRLLEIITELQPSQ
NDTQLLPPWIAVLSRGYDVSSQIEPEETFQKLPDLFDKISAFLASSSHNIRVSSSECLIS
LLHTCIPDSVLLDGSVMDDRVLEKMPSCAAPWAGRSRDAVLGAAIKAAGPKNVLAVLPLN
LGGRSSGPGRAWLLPIMRDSISNTELGHFRSELVPLSETMFQRVLNHGNAEKTMEVKIFE
TVVGQIWSCLPGYCQLPLDLKDTFDQTFAELLSNLLYQQPQLRTDICKALQNLVDTNKVI
AELEEEHEDLVQQGRVTKADAQQNLNYLGELAGPLLAILFNVYSQTLPQNRGNLLQCINA
YLSITPEQELLETFQRVAALLESSLAESGSQTQADKQKTAGKDGKDKMPPTSHTLMDLVI
TMSTYLPRESFAGLFNMAATVVNKQDDPQLQKKAYKLIPRLSESESGRLALAERSADLQQ
LLIDAAPKTSAPARRDRLASIAEIIPGMPKSDLSFIFSILSEVVISCKEVNEKARTAAFD
LLVLMAEKMAEGGTIIQSKVPHMPTDAPSAAASLEEFFTMVSAGLAATSPHMISAAITAL
TRLLYEFHGRLSEQTVSQLVQTMDTFLESKNREIVRSALGFVKVCIISLPNSLVLPRLET
LVPNLITWSHEHKQHFKAKVKHIFERMIRRFGVEVVQRYTPEADQKLITNIRKTRERRKK
KRDAEDGEDEAPAQPRQGKFESEYDQAVYGSASETESDISDDEVLGRSVAKGQKAKQSGQ
QYIVEDDEEPLDLLDRKALAHVSSTKPSKRREMPNGSTKKKAKTDLDGKLVFDEGSDIEV
LDFDESGMIDGQEPGDGTLEGGINAYVEAIKSKNAPQRGQRGKLKFKNVRGDDEMDIDED
DAIAAKKKLDARRPSKHTTKRRGLGGEKTKSGFAGDVIILLALIANDIEELQAVLALGGA
DNTEPVTELLLLEELLGQVLEVATRELLVGNDLDASIAEVGDGDGVAKVAGAPVDLDALL
KEGRECGWVEDAVLGGLSSVDDELEDVQSVDSLTRVGMCLEIPCWSPSGPSSRHRRLLSS
VQTLFSAYCTMPNCHSRRRRAAKRYTYGCRHFRCCRLMRRKEMGILRLVRLVVWSGREVG
RGRAEFRMSLPKMVAKILRVLT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggctctacaagagaggctggacaagattcgctcgtcgcctaagcttcagaatcaacag
caagcgtctgtggttctgaaagctgtcgacgagaccctccaagcacagaaaaccgatccg
acgccgaccgcatatttcgccgcgctgctgtcgctgctaggacagtacatttccagcgag
aagggaatcgtaaagaaggaattcgcaacgtctgtagtctacttgctagacctcgttacc
agccatgtcccagcgccactcctgcgatcgaagttcccgcaaattctgaacagtcttgcg
ccggcactggcgcaccaagacgcagatgcgccgctgttaagagcaagtgtcggttgtctg
gagtcgttgctgatcgcgcaagacactcaagcatgggctttgcctcaatctcctaccagc
ccgagaggcgctgtgggtggcctgctggccttgactgtggatcatcggccgaaagttcga
aagagggcgcaagatgcactgagcaatgtgttgaagcagcctccgccgagtccatcgctg
gatcatccagctgcggacatgtgtgctgagactgctttgcgacatctacaaaacgcagcg
gaacaagcgagcggcaagaagaaaaagcagcgacacagagacgagagccagcatgatccg
agtcttatgcacgctttacagttggttaaaactgtagcgtctgcccagaatggctggccg
agcagaaagattgatgcattatgtgagctgttgctcaacatctcgaagggcagcaacgag
tttctgaccatggctgcttttgacatttttgagatcatcttcgctggactggctgacgaa
gtttcttcgtcgaaattgccaaggttactggaaatcatcactgaactacaaccttctcaa
aacgacacccagctcctgcctccctggattgctgtactaagtagaggctatgatgtttcc
tcgcaaattgagccggaggagacgttccagaagctgccagatcttttcgacaagatttct
gccttcctcgcttcctcctcgcacaacatccgagtatcgtcttctgaatgtctaatttcg
ctccttcatacttgcataccagattctgtgcttctggatggctcggtcatggatgatcgt
gtcctggagaagatgccatcgtgcgcggcgccatgggcaggcaggagcagagatgctgtt
ctcggggcagcgattaaggcagcaggacctaagaatgtcctagcagttctgccactcaat
cttggtggaagatcttcagggccaggccgtgcctggctgcttcccatcatgcgtgactct
atcagcaacaccgagctaggacactttcgctcagagcttgtgcctctcagcgagaccatg
ttccaacgcgtgctcaatcacggcaacgctgagaaaactatggaagtcaagatctttgag
acagtggtcggtcagatctggtcttgtcttcctggatattgccagctaccactcgatttg
aaagatactttcgaccagactttcgccgaactcctcagcaatctcctctaccagcagcca
cagcttaggaccgacatatgcaaagccttgcagaacttagtcgacaccaacaaggtaatt
gcggagctcgaagaggagcacgaggacctggtacagcaaggacgagttacaaaagctgat
gctcagcaaaacctgaattatcttggtgagctcgccggcccacttctcgccatcctattc
aacgtgtatagccagacgctgcctcagaatcgcggcaatctcttgcaatgcatcaatgcc
tatctcagcatcactccagagcaggaacttctcgagacattccagcgtgtcgcagctctg
cttgagagctccttggcagagtctggttctcagacacaggccgataagcagaagacagca
ggcaaagatggcaaggataagatgccgccgacttcacatacgctgatggacctggtcatc
acaatgtctacttatctcccgcgagagagctttgctggtcttttcaatatggcggccact
gtggtaaacaagcaagacgatccccaattacaaaagaaagcatataagcttatcccacga
ctctctgaatcagaaagtggccgcttggctcttgctgagcgtagtgcagatcttcagcag
ttgctcatcgatgcagcaccgaagacatcggcaccggcacggagagaccgattggcatcg
attgcagagatcatccctggcatgccgaagtctgacttatcctttatcttctccattctc
tccgaagtcgtcatcagctgcaaggaagtgaacgagaaggctcgcaccgcagcgtttgat
ctcctggtgctcatggcagaaaaaatggctgaaggtggtacaatcatccagtcaaaggtt
ccgcacatgccgacagatgctccttcagcagcagcgagtctagaagaattcttcacaatg
gtctcggcaggccttgctgcgacatcgccgcacatgatctcagcagccattaccgctttg
acgagacttttgtacgagttccacgggcgcttgtctgagcagacagtctcgcagcttgtt
cagacgatggataccttccttgaatccaagaaccgtgaaatcgtgcgttccgcgcttggt
tttgtgaaggtctgcatcatttctctaccgaactcactggtactcccgaggctggaaaca
ctcgttccaaatctgattacatggagccacgaacataagcagcacttcaaagcaaaggtc
aagcatatctttgaacggatgattaggcgattcggtgtcgaagtcgtgcaacgatacacg
cccgaggcggaccagaagctgatcacgaacattcgcaagacacgagagaggcgcaagaag
aagcgtgacgcggaagacggcgaagatgaagcacctgcccaaccacgccagggcaagttc
gaaagcgaatacgaccaagctgtctatggctcagcatcagagacagagtccgatatctca
gacgatgaagtgcttggtcgctcagttgcaaagggtcaaaaggcgaaacaaagcggacag
cagtatatcgtggaagatgacgaggagcctcttgacttgcttgatcgcaaggcccttgcc
cacgtgtcatctacgaaaccttcaaagaggcgcgaaatgcccaatggctcgaccaagaag
aaagccaagactgatcttgatggaaagttggtgtttgacgagggttcagatattgaagtg
ctcgactttgatgagtcgggaatgatcgatggccaggagccaggcgatggaacactcgag
ggcggcatcaatgcttacgtcgaggccatcaagagcaaaaatgcaccacagcgaggtcag
cgtggcaagttgaaattcaagaacgtgcgtggcgatgatgaaatggatatcgatgaggac
gatgccattgctgcgaagaagaagcttgatgcgaggaggcctagcaagcacacaacaaaa
aggagaggactcggtggggaaaagacgaagagcggttttgctggggacgtcatcatcctc
ctcgccctcatcgccaacgacattgaagaacttcaagctgtactcgcccttggaggtgct
gacaacacggagccagtcacggagctgctgcttcttgaggaacttcttggtcaagtactt
gaggtagcgaccagagaactcctggtgggcaacgacctcgatgcgtccatcgccgaggtt
ggagacggtgatggtgtcgccaaggttgccggtgcgcccgtcgaccttgatgcgctgctg
aaggaaggtcgcgaatgcggatgggtcgaagatgcggtcttgggtgggctgagtagcgtt
gatgatgaactagaagacgtacagtcagtggatagcctaacgagagtaggcatgtgtttg
gaaataccttgttggtcaccttctggcccttcttcgcgccaccggcggttgctctcttct
gttcaaacacttttctcagcctactgcactatgccgaactgccattcaaggcgtcggcgg
gcagcaaagcggtatacgtacggttgcaggcattttcgctgttgtcggttgatgcgacgc
aaagaaatgggtatcctacgtctggtgcgacttgtggtgtggtctggtcgtgaagtcggt
cgtggcagagcagaatttcgaatgtcgctgccgaaaatggtcgccaagattttgcgggtg
cttacataa
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