Pseudocercospora fijiensis: MYCFIDRAFT_186852
Help
Entry
MYCFIDRAFT_186852 CDS
T03109
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MYCFIDRAFT_186852
Enzymes [BR:
pfj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
MYCFIDRAFT_186852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
19334880
NCBI-ProteinID:
XP_007923923
JGI:
186852
UniProt:
M2ZAC3
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MARLLISLLALASTAFAAFGLTYTDDTYILDTGSANTLVTTIDKASCDVTSIVYRGTELQ
GSGPGTHIGSGLGSSTVTAQVIDDQYIKVTCATSTLTHYIVAVSGESNLYMATYITAEPE
VGELRYIARLSSSVLPSEYPFGDVSTTAGSTETIEGSDVFVVNGETRSKFYSSQRFIDDH
VHCVYGNDVHACFVKPQYETASGGPFFRDINSNNGGSEYTSLTFYMNSGHVQTEDRRMGL
NGPYALTFTRSGIPKVADLDFSFFGDLDINGYVPESGRGYVSGIASGIQGDFQIVLHWYN
ADAQYWAYASSAGSFTSPAMKPGTYTMKLYRTELEVASQSVNVSAGSTTTSNIASALEEP
SKRIWTIGTCDGQPTGFRNAEKQLRMHPSDARMGKWAPGTFVIGTSADTDMPMALFKSVN
SPQTITFDSDSTAAATLRIRTTLAFASGRPSVTIGSFSDSAAAPTKIDSRGVTRGAYRGY
GEAYEFKIPEGTLVSGSNTLEIGVISGSSGDKFLSPNFRLLDSLD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggctattgatttcacttcttgctctagctagtacagcatttgcagcatttggt
ctgacctacaccgacgatacctacatcctagacactggttccgccaacactctcgtcaca
acgatcgacaaagccagctgcgatgtcacgagcatcgtctatcgtggcactgaactccag
ggctctgggcctggcacgcatattggctcaggtctgggaagctcaacagtcaccgcccag
gtcatagatgaccaatacatcaaggtcacttgcgctacctccactcttacgcactatatt
gtagcagtgagtggagagagcaatctttacatggccacatacatcacagccgagccagaa
gtgggtgagctgcgctatattgctcgtcttagcagctctgttctgccctcggagtatccc
tttggcgatgtgtcaactactgctggcagcaccgaaaccatcgagggctcagacgtgttc
gttgtgaacggcgaaacgcgaagcaagttttacagctcgcagcgatttatcgatgaccac
gtacattgcgtctatggcaacgacgtccatgcatgcttcgtcaagccacagtacgagact
gcctcgggaggaccgttcttccgcgacatcaattcgaacaacggaggcagcgagtatact
tcgcttactttctacatgaactccggccatgtccagacagaagatcgacgcatgggcttg
aatggtccctacgctttaactttcactcgaagtggaattccaaaagtcgcagacctcgac
ttttcattcttcggcgacttggacatcaacggctatgttccagaatccggacgtggctat
gtctcaggaatagcatcgggaatccaaggagactttcaaatcgtactgcattggtataat
gctgacgctcaatactgggcttatgcgtccagcgctggctctttcacctcgcctgctatg
aagcccggcacttatacaatgaagctctacaggactgagcttgaggttgcttcgcagagt
gtaaatgtttcggccgggtcgaccaccacgagtaatatcgcatctgccttggaagagcca
tcaaaaagaatttggactattggaacttgcgatgggcaaccaacaggattccgcaacgca
gaaaaacaacttcgaatgcacccgtcggatgctcgaatggggaaatgggctccaggcaca
tttgtaatcggtacgtccgcggatactgatatgccgatggcgctattcaagagcgtgaac
agcccccaaaccatcacgttcgattctgactccactgccgctgcaactctgcgtattcga
acgaccttggcatttgcttccggtaggccatcggtcacgattgggagcttcagcgattcc
gcagctgcgccgaccaagatcgatagtcgcggtgtcacacgaggcgcatacagaggctat
ggcgaggcatacgagtttaagattccggagggtacgctggtgagtggcagcaatacgctg
gaaattggtgtcatctcgggaagctctggcgacaagttcctatcgccgaattttaggcta
ctagacagtctagactaa
DBGET
integrated database retrieval system
