Pseudocercospora fijiensis: MYCFIDRAFT_189080
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Entry
MYCFIDRAFT_189080 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03013
Nucleocytoplasmic transport
pfj03015
mRNA surveillance pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_189080
09122 Translation
03013 Nucleocytoplasmic transport
MYCFIDRAFT_189080
03015 mRNA surveillance pathway
MYCFIDRAFT_189080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_189080
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_189080
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
MYCFIDRAFT_189080
Spliceosome [BR:
pfj03041
]
Common components
Common spliceosomal components
Cap binding complex
MYCFIDRAFT_189080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
HEAT_URB1
Motif
Other DBs
NCBI-GeneID:
19335052
NCBI-ProteinID:
XP_007927797
JGI:
189080
UniProt:
M3AD00
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MADVDNRRDYRGPGGGGGHGGGRGFNKRKRFREDDDYDQGGRNQRYQREAPPGTRIRKGL
LEIAEDHGRLAHEVAANLAKLTAENYDDEYVQELFSTVTLKMVLEQPFKIPFVAAVVLYA
NTEKSAIAQDVLLKIGNQLQSALEAGQLRDVKLLLRFLSCLGPLFEEDGVMPILDTLFER
AADLQTASQDDALGIELVKIILLTIPYLMVASSDASLPQKVAQLLESTGIIATQSHTLEA
LVDPYPAPEGEEKAMQCPSVVSLLQNQLIEEANNGWTLACIPRVFDPNHKPTAVKTENGE
TNGDANGDVETEEPTKHSFPPLTVPSTINAGSKPLLPEVYFSLFADQEIESVPSTNNVAS
SLLRDAVTDTINILDFNRNVVAKYLNEIDCFWAPDTFVKRSTTFDKLRDLPEGKPKWKPE
DVAIDAIFSQIFQLPTSEHRVVYYHSLITESCKISPGAIAPTLGRAIRFLFRNLEHMDME
LSYRFMDWFAHHLSNFEFRWKWSEWIPEVDLSDLHPKKAFIKGVLDKEIRLSFAKRIRAT
LPEPYHKLIPASKEKDIPDFKFANDQTPYAKEGREVLTLLKKKAPEDEIQKVLDSVHEQA
TALGHADPLAPSTDIYMTSILSIGSKSLSHVLSTIDRCKDRLLSVGQRSELARRQIIESV
VQFWSDHPGTAINIVDKLLNYTIVTPMSVIQWALQDRMDSGRALASSQVYEMVSITMFKV
TNRVRQVLRERNNLSLPYESRQQIDEALPNERQAMRDLFAAIEDAVAAVANGSQDGMIER
FNGAIAERDLIVLWGKRWERVWQRKAAVEEAVVGEAVVGPLEEPPAPEVQMQQDVVDDFD
QIE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtggacaatcggcgtgactatcgcggccccggcggcggcggcggacatggc
ggagggcgaggcttcaacaaacgcaagcgatttcgagaggacgacgactatgaccaaggg
ggacgtaatcagcgatatcaacgtgaagctccgccaggcacgcgcatccgaaaaggactg
ctcgagatcgccgaagaccatggccgactggcgcacgaagtcgcagcgaacctcgccaag
cttactgccgaaaactacgacgacgagtatgtgcaggagctgttttcgactgtcacgctg
aaaatggtgctcgagcagccattcaagattccgttcgtggcggcagtggttctctatgca
aacacagagaaatcagccatcgcgcaggacgttcttctaaagattgggaatcagttgcaa
tcagcactcgaggcaggacagctgcgagacgtgaaattgctgctcagatttctgtcttgc
ctgggtcctctcttcgaggaagatggagtgatgccgatcctggatacgctcttcgaacgc
gcagctgatctgcagactgcatcgcaggacgatgctttaggcattgagctcgtcaagatc
attctactcaccataccgtacttgatggtcgcatcctccgatgcatccctgccgcaaaag
gttgcgcagctgctcgaaagtactggcatcatagccacgcagtcgcacactctggaggcg
cttgtcgatccatatccagcgccggaaggcgaggagaaggcaatgcagtgtccaagtgtc
gtctctctgctgcaaaatcagctgatcgaagaggccaacaacggctggacgcttgcctgc
atcccacgagttttcgacccaaatcacaagccaacagcggtcaagacagagaacggtgaa
acgaacggcgacgcgaatggtgacgtagaaaccgaagagccgacaaagcactcttttcca
ccgctcaccgtaccttccaccatcaatgcaggaagcaaacctctgcttccagaggtgtac
ttctcgcttttcgctgaccaggaaattgaatctgtcccatcgacaaacaacgtagcatcc
tcgctcttacgcgacgccgtcactgacacaatcaacatcctcgacttcaatcgcaatgtt
gtggccaagtatctcaacgagatcgactgcttctgggcaccagacactttcgttaagcgc
tcaacaactttcgataaattgcgcgaccttcctgagggtaaacctaaatggaagcccgaa
gatgtcgcaatcgatgcgatcttctcccagatcttccagctacctacctcggagcaccgc
gtggtctactaccactctttaatcaccgaatcctgcaaaatttcgcctggagctatagca
cccacactgggacgcgccatccgtttcctgtttcgcaaccttgagcatatggacatggag
ctgtcataccgattcatggactggtttgcacatcatctgagcaattttgaatttcggtgg
aagtggtcagagtggataccggaagtagatctctcagatcttcacccaaagaaggcattc
attaaaggtgtgctggacaaggagatacgcctgtcgttcgcaaagcgtattcgcgctaca
ctgcccgagccctaccacaagttgatcccagccagcaaagagaaggacatccccgacttc
aagttcgctaacgaccagactccatacgcgaaggaaggccgcgaagtccttactcttctc
aagaaaaaggctcccgaggatgagattcagaaagtccttgattccgtccacgaacaagcc
acggctctcggacatgccgacccactggcaccgtccacggacatctacatgacatcaatc
ctcagtattggatccaagagcttatcccatgtcctcagtactatcgaccgctgcaaggat
cgtcttctcagcgtcggccagcgctccgagctcgccagacggcagatcattgaatcagtc
gtccagttctggtcggaccatccaggcaccgcgatcaatatcgtcgataagcttctcaac
tacaccatcgtgactcccatgtccgtcattcaatgggcgctgcaagaccgcatggatagt
ggccgagcgctcgccagcagccaagtctacgagatggtatccattaccatgttcaaggtc
acgaatcgtgttcgccaggtcttacgggaacggaataacttgtccttgccgtatgagagc
cgccagcagattgatgaggctctccccaacgagcgacaagctatgcgcgacctctttgcc
gctatcgaagatgctgtcgccgccgttgcgaatggttcccaggacgggatgatcgagaga
ttcaacggggccattgccgaacgcgatcttatcgtgctttggggtaagcgctgggagaga
gtgtggcagagaaaggcagcggtcgaagaggcagtcgtcggcgaggcagttgtgggtcca
ttagaggagccacctgcgcctgaagtgcagatgcagcaggatgttgtagatgatttcgat
cagatcgagtaa
DBGET
integrated database retrieval system