Pseudocercospora fijiensis: MYCFIDRAFT_202170
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Entry
MYCFIDRAFT_202170 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_202170
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MYCFIDRAFT_202170
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
Helicases
MYCFIDRAFT_202170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
OB_NTP_bind
HA2_N
AAA_22
AAA_19
T2SSE
AAA_30
FtsK_SpoIIIE
nSTAND3
Cas3-like_C_2
AAA_23
AAA_33
Motif
Other DBs
NCBI-GeneID:
19336011
NCBI-ProteinID:
XP_007923119
JGI:
202170
UniProt:
M2Z6X8
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MTIRSAELKAQQPESKVSAKKRKRLDKYIDTKIKKEENLELLKKLAAQKVDTSLLQSSKK
LGRTNETKRERFSRALAEKNAGIDLDGQQDDILYERRQEPTRHTHSAGESEHETPQIPSN
DAVEQLAPESKPAGLFGDGLFGGGLKRPLEINDSGQPVIKRRKREKKNKKAKPDFVVALP
EPEEPSDSEASDEWNGFSENESEAEVEPNTASEGTSEDDGNSESLEGSEDTDTDDSSSGG
DEDPEGDSVKKPARVSAFKAWADSQRNEAVGFTPSAPPTNDESIRAAFKPRAPSPDPVAS
ETLVTSPAAEDAYRPSKAVVIPRDDAVQEARSHLPVVQDEQKIVEAVHNNSVTIVCGATG
SGKTTQLPQLLLENGYASNGMIGVTQPRRVAATSVAKRVQYELGAEFGKQVGAQVRFTST
VSRDTKVKFMTDGILLREISQDFALSKYSAIVLDEAHERSVNTDILIGMLSRIVPLRLKL
SKEDPVKYHPLKLIIMSATLRVTDFLMNERLFRRTKPPIVQAEGRQYPVTEHFARRTQRD
YVAEMVRKVSRGHKKLPPGDMLVFLTGQDDIQTVARRLREAFTGDQEGFQNSNRRARPEK
PVNDYLEANEDDEASEDEAEITGLDEDEGDAEFAVEVDPALSGSQPRGALKAQILPLYAA
LPATQQDLVFQKTADGVRKIILATNVAETSLTIDGVRYVFDCGRSKEKVYDVETGVQEFK
VDWISKASASQRMGRAGRTGPGHCYRLYSSAIYEAHFEEHTLPEILRTPIEGTVLQLKNM
SIDNVVNFPYPTPPEGKQLSQAERLLKNLGAIDNRTGKVTDIGKQLINYPVNPRFGRMLL
LGKQNNVLIYTIALVAGLAVGDLFIPQPHLPQEELEDEDSDHSGRRKAGSFADTQAEKRR
QAYGRAMANLASQDDKSDAIKVLTAVAAHAQAEAQGSASSFCAENFLREKAMAEAQQLRR
QLHNIMQKHVDDPSTVAFTPTLSPPSDRVKSILKQIVAAGYIDQVAIRRDLLPNAVSTGR
KPRRAIEVPYKTLLSSNLEIDDSVSLQDQELQKSVFVHSSSVLARLSLSEMPSFVVYSTL
SRATSNHIGEAQKRTRMHPLCTVSQKQLAVLAEGSPLLEIGKPIGKIEEIGTGKRQCWVG
VAIRDPAAVGAMGWPLGAWKVIQTRKGKEWVVEKVLDRGK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaggtcagccgagttgaaggcgcagcagccagaatccaaggtctcggcgaag
aaaagaaagcggttagacaagtacatcgatacgaagatcaagaaggaagagaatttggaa
ctgttaaagaagctagccgctcaaaaagtcgataccagcttgttgcagagctcgaaaaag
ctgggccgaacaaacgagacgaaacgggagcgcttttcgcgcgcattggcagaaaagaat
gctggaattgatttagatggacagcaggacgatatactttatgagcggagacaagagcca
accagacacacgcactccgcaggcgagagtgagcatgagacaccgcaaattccctcgaat
gacgcagtggagcagcttgcaccggagtcaaagccagccggcctgtttggagacgggcta
tttggaggcggtctgaaaaggcctctggagataaacgactcaggccaaccagtaatcaag
agacggaaacgtgagaagaagaacaagaaggccaagccagacttcgtggtagctctgcca
gagcctgaggagccgagcgattcagaagcatccgacgagtggaatggcttcagtgagaac
gagagtgaggcagaggtagagccaaacacagcgtccgaaggcacatcagaagatgatggg
aactcagaatcactagaaggctctgaagacacggacacagacgacagctcctcagggggc
gacgaagacccggaaggagacagcgttaagaaaccagcacgagtgtctgccttcaaggca
tgggcagattcgcaacgcaacgaagctgttggatttacgccgagtgcacctcccaccaat
gacgaatctataagagcagcattcaagccgcgagcaccttctccagaccctgtcgcttca
gagacactggtgaccagcccagccgctgaagacgcgtaccgaccttcgaaagcagttgtc
attccgcgagacgatgccgtgcaggaagcacgatcacacttgcccgttgtgcaagacgaa
caaaaaattgtcgaagcagtccacaataattccgtcacaatagtgtgtggtgcaactgga
tcaggaaagacaacgcagttacctcaactgcttctcgaaaatggttatgcttcgaatggc
atgattggagtgacccaaccacggcgagtcgctgcaacatcagtagcgaagcgcgtgcaa
tacgagttgggagcagaattcggcaaacaggtcggcgctcaggtccgcttcacgagcaca
gtgagcagggatacgaaggtcaaattcatgactgatggcattttgttgcgcgagatctct
caagactttgcgctttcgaagtacagtgccatagttctcgacgaagcgcatgagcggagt
gtcaacacagatatcctcatcggcatgctctctcgtattgtcccgcttcgactcaagctc
agtaaagaggaccctgttaaatatcatcctttgaagctaataatcatgagtgcgacactc
cgggtgaccgatttcctgatgaacgaacgtctatttcgcaggacgaagcctccaatagtg
caagccgaaggccgccagtacccggtgaccgagcacttcgcacggcgtactcagcgtgac
tatgtcgcagagatggtgcgcaaagtgagtcgaggccacaaaaaactcccgcctggtgac
atgctagtgttcttgactggccaggacgacatacaaactgtggcaaggaggttgagagaa
gctttcacaggagatcaggaaggcttccaaaactcgaatcgcagggcacgacctgaaaag
cctgtcaacgactatctcgaggcgaatgaggatgacgaggcgtctgaggacgaagccgag
atcactggcttagatgaggacgaaggagacgcagaattcgctgtcgaagtcgacccagct
ttgtctggatcgcagccgcgcggcgccctcaaggcacagatacttcctctgtacgcagca
ttaccagcgactcagcaggacctggtgttccaaaagacagcagatggagttcggaagatc
atcttggcgaccaatgtcgctgagacttccttgaccatcgatggtgtacgatatgtcttt
gactgtggacgcagcaaagagaaggtctatgatgtcgagactggtgtccaagagttcaaa
gtggactggatctcgaaagccagtgcttcacagcgaatgggacgtgctggccgaactgga
cctgggcactgctacaggctgtacagctccgccatctatgaagctcactttgaagagcac
actctaccagagattttgagaacgccgatcgaagggacagtgctgcagctcaagaacatg
agcattgacaatgtagtcaattttccgtatccaacaccgccggaaggcaaacagctaagt
caagcagagagactgctcaagaatctcggcgcgatcgataacaggaccgggaaggtcact
gatatcggcaaacaactgatcaactaccctgtaaatcctagatttggacgcatgctcttg
cttggcaagcagaacaatgtgctgatatacactattgccctggttgcgggcttagcagtg
ggcgatttgttcatcccacagccccacttaccgcaggaagagctcgaagatgaagacagc
gaccacagcggccggaggaaagccggctcttttgcggacacacaagctgagaagcgacga
caagcctacggccgcgccatggccaacctcgcctctcaagacgacaagtcggacgcgatc
aaagttctcacagcagtcgccgcccatgcacaagcagaagcgcagggcagtgcgagctca
ttttgcgcggaaaacttccttcgagaaaaagccatggcagaggcccagcaactccgtcgt
cagctccacaatatcatgcagaagcacgtcgacgacccgtcaaccgtggccttcacaccg
acactgtctccgcccagcgatcgtgtaaagagcatcctaaaacagatcgtcgccgctgga
tatatcgaccaagtcgctattcgccgcgatctgcttcccaatgctgtttccactggacgc
aagccgcgccgagccatcgaagttccttacaaaactctgttatcttcgaacctcgagatc
gatgattcggtcagtcttcaagatcaggagctacagaaaagcgttttcgtacattcttct
agtgtacttgcacgcctctcactaagcgagatgccgtcatttgtcgtctactcgaccctc
agtcgcgcgacgtccaaccatattggggaagcgcagaagcggacgcgtatgcatccgctt
tgcacggtcagtcagaagcagcttgctgtactggctgaaggctcgccattactcgaaatt
ggcaaaccgattggcaagattgaagagattggcactggtaagagacagtgctgggttggc
gtcgctatccgtgatcctgccgccgtgggagccatgggttggcctttaggggcttggaag
gtcatccagacacggaagggcaaggaatgggtcgttgagaaagtgctggatcgtgggaag
tga
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integrated database retrieval system
