Pseudocercospora fijiensis: MYCFIDRAFT_204211
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Entry
MYCFIDRAFT_204211 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_204211
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MYCFIDRAFT_204211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CLASP_N
HEAT_SCC3-SA
RICTOR_N
Vps35
Motif
Other DBs
NCBI-GeneID:
19336242
NCBI-ProteinID:
XP_007928425
JGI:
204211
UniProt:
M2YTU8
LinkDB
All DBs
Position
Unknown
AA seq
2536 aa
AA seq
DB search
MSSMSRGKAGKAAKAYRVVKPKKSSKHTTQHHRNHRFQSFNDLIENTNIHPIRRKRFVEG
EETEVASSHSFFGESLQEWRDTNLSATFTAFAKEVAPLCDNLAGVLHNEDRIMDSLVSYI
ERGDALAMDALLSLLSHLAHDLDARFEKHFQRAVATITALAAKHDDHAVIEQSFTCLAWL
LKYLSRLLTPDLRPLYDLVAPYLGKERQNPFIVRFTAESLSFLLRKTAATYERDSTPLDS
IMQHMLQDCETCKDEPSADLQQQGIMALLTEAVRGVQNGIHTSGKAVLQCLLKCAGGIAK
KNEEVVERLTTGIVTSLIHYCNKEGFEPVLDVLLDFAHAALSPPLSSSIHFASSLLFTAM
SVRKGSRIMAWNKVATATRDLIGACDSLTSISEHIAEAVLASLAIYLTTSTTLDSVAETT
RMLELLRSKKWESHFPHFCDIYFRLSINGTFDHLVLAQLKQFVSQQKGKLHPELLALIPR
AGSQHPKDLFTIPNDVFDRFIALLTRVGGQSEDVDSNELAEANAHLSITPYLLLDDSQRQ
DLQAALRALVEKGLTDRRGRSREVRDFSLGPAFHHLLQLGLQTTKADNLWVLLCEACRHV
SGLPVFWSNLLQFLKLWKPTNAGAQVEQLEEVLISCLAMPSDSIRSDVLDLIQQLYRLKG
LEEPEILATAITIESTPIKLETARSISMNIRRLAKQYSTLNENDPMVRAIPTYCFGLLHV
RLSQAWEDASNTLASICETKAGEEVVISLIQTWIDQSAAAADQEVSEPSLLDSSSEGFKV
FSDFECPNLAKMLAIRQQVFREPQSGALSSKGQLQADIRHLDSITTTSRGQALKVLSKIP
KVAERRSRILVPILLRWAGPQGEEDCDQETHARWARKDQKALLAIFAQFVNPKVLFRADE
VFQALLALCANGDVEIQKSALTALLAWKNPSVARYKEHLNNLLDEERFREELSVFLQEHA
DDDEESEGIRPEDHSSLMPVLLRLLYGRAIAGGKEGQSGRRKALFVALSRFGEATMQEFL
NIAFRSLSGPGDKIEIPPRAPLRQQLGLVNMINDMLQVLGSELKPFVSKILDGVLACTVG
AEQELSKEDTTDQSLLRALRQSGVQCLVKVFANVGDFQNSWSYAETIAHDIVRPRLESFA
GENAQSISGVLRLLAAWTASSDTVSVFRIEDVVMLESVAQLLQTEHTKDEVRLFILQELL
DNLTTPEISAQILQPHISDFVKAIGIVLEQQPSKAVLDACVRSFSHLAGRITSQEEAVNV
IGVCAVLLKRPSHAVSSATKIYLLRTILPLIGNFKTDAKDDLYSALCALYSRLPDNDSRS
LLSQVLAALVRDDQRLLGAAKICADMNAMGSRLDEPDHGRRDAAYASVFKEANNFSLEQW
LPLVHNFLYYIRDNDDSVARKNASQALRFFVSAVAVHFEEQHWQGLLDDAVFQGIERGIR
DSRSTELVRAEYLAVLGHIVEKLPDWQKVSDMQILLVGGDEEASFFANALYIQQHRRLRA
LRRLGDEATKLASHNISKIFLPLLEHFIFDQAEGDAGRVLADQAVQTIGSLAKGLNKSAF
RAVFQRYMGHLKAKKQDEDEDVEKKALRLCNAMVDGLQRDSDQVSAPIVRELLPPLTQYL
QHKDESTVDRRIAVAVTIVKLMHAALPEDDFALRLPGVLLEVCHVLRSRSQEARDQTRKA
LTSISALIGPHYFGFIVKELRSALKRGYQLHVLSYTVHSLLVQTTLSSGDLDEVLSDIML
VIMDDIFGITGQEKDAEEYKSGMKEVKSSKSFDTMELLAKITPIRKLGELIRPIRSLLSE
RVDLKVVKKMDELLTRLRKGLDQNPESESRDLLIFCYEIVKQVYADDQAITNARPELDER
RKRYIVQPEPEQKKKTAKGSTTSYRFKLTAFALNLLRKVLRRHEDLQTPQNMAGFLGMAG
DGLIQGQEEVKLSAVRFLSTIMRVPLPQLEENAPVYVKEAVLMIKSAPDMTTESAKAALE
LITSVLREQRSVSIKEKDMALVLKRVKAGIDEPDRQTVIYKFLKAVIGRKIVITEVYEVM
DEVSKAMVINPDRAIRESARSAYSAFIMDYPQGKDRWKKQTSFLVGNLQYEHAEGRKSVM
EFIHQILSKIGDDVFEKEVGNRLFVSLLPVLVSDSSSECREMARLLVAKLFERASTEQLK
KFLGMMETWTQSEKKPAVRAGALQCWSVLLKAKQLPEKQLVGIRDKLEDIISDCSAEDAV
VDPQLALDALKTLGTLVETAPFVAFSSSSSGVWDGLQTLEITGDAEIDELVASLLGSFFT
DFASTSSKTTDGLAGLPLRGSGGMELGAGQMRRLATIALRTLRNIQLGTSETLIAQIARN
LVFLGRCFASNEMPWNQTSDATPAGSEEENEDDDEEETDDATSRSALSRLLQRLSSMLMA
DKFSVVSRTAALQTLTSLINAIPTIPALPAILRPLYALTDPSVPKPPGELHANLTAKAHE
TLDLIQKKVGSDRYLKVLGQVRTEAKARREERRQKRRIEAVSKPEIWAEQKRRKHEVKKI
KIKEKGAEARGRRRGW
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccatgtcgagagggaaagccggcaaggctgcgaaggcgtacagagtcgtcaag
ccgaaaaagagcagcaagcatacgacgcagcaccatcgaaaccaccgattccagtccttc
aacgacctcatcgagaacaccaacatccatcccatccgccgaaaacgctttgttgaggga
gaagagacggaggtggcgagctcgcactcgttcttcggagagtcgctgcaagaatggaga
gacaccaatttgtccgcgacgttcacggcgttcgcgaaagaagttgcgccgctttgcgac
aatctcgcgggcgtgctgcacaacgaggatcgcatcatggactcgctcgtcagctacatt
gaacgcggcgatgctttggccatggatgcgctgttgagtctgctctcgcatttggcgcat
gatctagatgcacgattcgagaagcacttccaacgtgctgtggccacgattacagccctc
gcagcgaagcacgacgaccacgctgtcatcgagcagagcttcacgtgcctcgcgtggctg
ctgaaatacctgtcgcgactgctgacacccgatctgcgaccgctgtatgacctggtggca
ccatatctgggtaaggaacgtcaaaaccctttcattgtacgcttcactgcagagtccttg
agctttttgctgcggaaaaccgccgcgacatacgagagagattcaacgcctctggacagc
atcatgcaacatatgctgcaagattgcgaaacctgcaaagatgagccttctgcagacctg
cagcaacaaggtatcatggcgcttctgactgaggctgttcgcggtgtgcagaacggcatt
catactagtggcaaagcggtattgcagtgtctcctcaagtgtgcaggcggcattgctaag
aaaaatgaagaagtcgtggagcgcctcaccactggcatagtgactagtctgatacactat
tgcaataaagaaggcttcgagccggtactggacgtcttgctcgacttcgcccacgccgca
cttagccctcccttgtcctccagcattcacttcgccagctcgctcctgttcaccgccatg
tccgtgcgaaagggaagtcggatcatggcctggaacaaagtcgcaactgctactcgggat
ctgatcggtgcttgcgatagtcttacgagcatctcagaacacatcgctgaagctgttctt
gcttcgttagctatctacctcactacttcgaccactctagactcggttgccgagaccacg
cgcatgctggagcttttgaggagtaagaaatgggagtcacactttccacatttttgcgac
atctacttcagactaagcatcaatggaacgttcgaccaccttgtcttggcccagctgaag
caattcgtctctcagcagaaaggcaagctgcacccagaactacttgctctgattcctcga
gccggaagccagcacccgaaggaccttttcacgattcccaatgatgtttttgatcgattc
atcgccctcctgaccagggttggaggccaaagcgaagatgtggactcaaacgagcttgca
gaagcaaatgctcatctatctattactccatatctgctactggatgactctcagaggcag
gatctacaagcagcactacgggctttagtagagaaaggtctcacagacagaagaggtcgc
tcgagagaagttcgagacttcagccttgggcctgcattccatcacttactccagttggga
ctacagaccacgaaagccgataatctttgggtattgctatgcgaggcctgtcgccatgtc
tctggccttcccgtgttctggtcaaacttactgcaattccttaagctctggaagccgacc
aatgctggggctcaagtggaacagcttgaagaagtgctaatctcctgcttagcaatgcca
tctgactctattcgaagtgatgtgcttgatctgatccaacagctgtatcgactgaagggg
cttgaggagccagagatcctagcgactgctatcacgatagaatcaacgccaatcaaactc
gaaacagctcgatcaatttcgatgaacattcgaagattggccaagcagtatagcacgctg
aacgagaacgacccgatggttcgagctatcccaacgtactgttttggcttgttgcacgtc
agattatcgcaagcttgggaggatgctagtaacacacttgcatcgatttgcgagaccaaa
gctggcgaagaagtggtgattagtctcattcagacttggatagatcaatccgcggctgca
gcggatcaggaggtgtccgaacccagcctccttgacagcagttctgagggcttcaaggtc
ttctctgattttgaatgtcccaatctggcgaaaatgttggccatacggcaacaggttttt
cgcgagcctcagagcggtgccttgtcttccaaaggacagctgcaagccgatatcagacat
ctcgactccatcacaacgacttctcgtggccaggcgctaaaagtgctcagcaagatccca
aaagttgctgaaagacgttcacggatcctcgttcctatcctccttcgatgggctgggcca
cagggtgaggaagattgtgatcaagagactcatgcgcgctgggcgagaaaggatcaaaag
gcactgcttgctattttcgcgcaatttgtcaatcccaaagttctcttcagagcggatgaa
gtcttccaagctctacttgctctttgcgcgaacggcgacgtcgagattcagaaatctgcc
ctcacagcattgcttgcctggaaaaatccttcggtggctcgttacaaggagcatctcaac
aacttgctggatgaggagagattccgtgaagaactttccgtcttcctgcaagagcatgct
gatgacgatgaagagtctgaagggattcggccggaagaccatagcagcctcatgcctgtc
ttgctacgccttctctacggaagagctatcgctggcggcaaagagggccagtctggtcgt
cgcaaagctctgttcgtcgcgctctctagatttggtgaggcaacgatgcaagaatttctc
aacattgcattcaggtcgctatcaggtccgggtgacaaaattgagattccaccaagagcg
ccgctgcgtcagcagcttggtcttgtcaacatgatcaacgacatgcttcaagtcctagga
agtgagctaaaacctttcgtttcgaagatcctggatggtgtcttggcgtgcactgttggc
gcggagcaagaactctccaaagaagataccacagaccaatcacttctacgagcacttaga
caatctggtgttcaatgcctggtcaaagtcttcgccaatgttggcgacttccagaactcg
tggtcatacgccgagacgatcgctcatgacattgtccggccacgtctagagtctttcgcg
ggtgagaatgcacagtcgatctcaggtgtcctgcgtctactcgcagcctggactgcttct
tcggacactgtatctgtctttcgaatcgaagacgttgtgatgctggagtcagtggctcag
ctcttgcaaaccgagcatacaaaagatgaagtccgattattcattctgcaggagcttctg
gacaatttgaccacgccagaaatatcagctcagatactgcagcctcacatctccgacttt
gtgaaggccattggtatcgtgcttgaacagcagcccagcaaggcggtcctcgacgcatgt
gtcagatcattctcgcacctagcgggcaggatcacatcccaagaggaggcagtgaatgtg
attggagtctgcgccgttcttctgaagagacctagtcacgccgtctcgtcggcaaccaag
atatacctgctgcggacaatcttgcctctcattggcaacttcaagacagatgccaaggac
gacctctactcagctttatgtgctttgtactcgcgcttgccggataatgatagcaggtcg
ttgctgtcccaagtgctcgcggctctggttcgagacgatcagcgactcctcggcgcagct
aagatttgcgcggacatgaatgccatgggttccaggttggatgagcctgatcatggccgt
agagatgccgcgtatgcgagcgtcttcaaggaggccaacaacttctcattagagcagtgg
ctgcctttggtgcacaactttctgtattacatcagagataatgacgatagtgttgccagg
aaaaacgcctcccaggccctccgattctttgtcagcgctgttgctgtgcacttcgaagag
cagcattggcaggggttgctggatgacgctgtcttccaaggcattgagcgtggaattcga
gacagcagatcgactgaactggtccgcgctgagtacttagctgtcctgggacacattgtg
gaaaagttgcctgactggcagaaagtgtcagacatgcagatacttctggtcggaggtgac
gaggaagcgtcattctttgcgaatgcgctctacatccagcagcaccggcgacttcgagca
ctcaggcgactgggcgatgaagctacaaagttggcatctcacaacatctcgaagatcttc
ttgcccctgctcgagcatttcatcttcgatcaggcagaaggcgatgctggacgggtgtta
gccgaccaagcagtgcaaacaattggctctcttgcaaagggcttgaacaaatccgccttc
cgtgcagtgtttcagcgatacatgggacatctaaaggccaagaaacaggacgaagatgaa
gacgttgagaagaaagctttgcgtttgtgcaatgccatggttgatggtttgcaacgcgat
tctgatcaagtgtcggcacctatcgtgcgagagcttcttcctcccctcacgcagtatctt
cagcacaaggatgaatcgactgtcgatcgtcgcattgcagtggctgtcacaatcgtaaag
cttatgcatgcagctctgccagaggacgattttgcgttgcgattgccgggagtgctgctg
gaggtctgccacgtcttacgctccagaagccaagaggcgcgcgatcaaacgagaaaagcc
ttgacgtccatatccgctttgatcggaccacactacttcggctttattgttaaggagctt
cgcagcgcactgaagagaggttaccagttacatgtcctgtcctacactgtgcactcactg
ctggtgcagaccacgctgtcttcaggcgatctggacgaggtcctgtctgacataatgctt
gtcatcatggatgacatcttcggcatcacgggccaagaaaaggatgccgaggagtacaag
agcggcatgaaggaggtgaagagtagcaagagcttcgacaccatggagctcttggccaag
atcactcccattcgcaagctcggagagctgattcgacctattcgctctctcctgtcggag
cgtgttgacctgaaagtggttaagaagatggacgagctgcttacgaggctgcgcaaaggc
ctggaccagaatcccgagtcggagagccgggatttgctcattttctgctacgaaattgtg
aagcaagtgtatgccgatgatcaagccatcacaaatgcacgacccgaactcgatgagcga
aggaagcgatatattgtgcaaccggaacctgagcagaagaagaagacggcaaagggctcc
actacatcttaccggttcaagctcacggcctttgcactcaatcttctgcgcaaggtactg
cgtcggcacgaagatttgcagacacctcaaaacatggctggcttccttggtatggccgga
gatggcctcattcaaggtcaagaggaggtcaagctttctgccgtacgctttttgtcaacc
attatgcgagtgccacttccgcaacttgaggaaaatgcgccagtctatgtcaaggaagct
gtgctcatgattaagagcgctcctgacatgacgactgaatccgccaaggccgctctggag
ttgatcacatccgtccttcgtgagcagcgctcagtctcgatcaaagagaaggatatggca
cttgttctcaagcgtgtcaaggctggcattgacgagcccgatcgccagactgtgatttat
aagtttttaaaggctgtcattggtcggaaaatcgtgatcacagaagtctacgaggtgatg
gacgaggtcagcaaagcgatggtcatcaaccctgatcgtgccattcgagaaagtgcacgc
agtgcttacagtgccttcattatggactacccgcaaggaaaagaccgatggaagaagcag
acgtcattcctggtcggaaatcttcagtacgagcacgctgaaggtcgaaagagtgtcatg
gaattcatccaccagatcttgagcaagattggagacgatgtcttcgagaaggaagtcggt
aataggttattcgtgtccttgcttccagtccttgtgagcgactcgagcagtgagtgtcga
gaaatggcacgacttctagtcgccaagctgttcgagagggcctcaacagagcagctgaag
aagttccttggcatgatggagacatggacacaaagcgagaagaagcctgctgtgagagcc
ggcgcacttcagtgctggtcagtgcttctgaaggcgaagcagctacctgagaagcaactt
gttggcatccgcgataagctcgaagacatcatatctgactgctcagctgaggatgccgtg
gttgacccacagcttgctttggatgcgctgaagacgctcggtactcttgttgagacagcg
ccttttgttgctttctccagcagctcgtctggagtatgggatggcttgcaaacactggag
atcacgggagacgcagagattgatgaattggtcgcatcactgctaggcagcttcttcacc
gacttcgcaagcacaagttcgaagaccacagatgggctagctggtctgcctctacgtggc
tcaggcggtatggaacttggcgcaggacaaatgcgcaggctggcaaccattgctcttcgt
acactcagaaatatccagcttggcacaagcgagactctcatcgcacagattgcaaggaat
ctcgtctttcttggccgctgctttgcctctaatgaaatgccttggaaccagaccagcgac
gccaccccagcgggatctgaggaggagaacgaagatgacgacgaagaagagacggacgat
gcgacgagccgctctgctctctcccgtctccttcaacgtctctcatccatgctcatggcc
gacaaattttccgtcgtctcccgtacggcagcgctccagactcttacctctctcatcaat
gccatcccaacaatcccggccttgccagcaatcctccggcccctttacgctttgacggac
ccttcagtccccaagccacctggcgaactgcatgcgaatctcacagccaaagcacacgag
acgctagacctgattcagaagaaggtgggatctgacaggtatttgaaggttcttggacaa
gtcagaactgaggcaaaggctagacgcgaagagagaagacagaagagacgcattgaggct
gtgtcgaagcctgaaatttgggctgagcagaagaggaggaagcatgaagtgaagaagatc
aagattaaagagaagggtgccgaggcacgaggacggaggagaggatggtag
DBGET
integrated database retrieval system