Pseudocercospora fijiensis: MYCFIDRAFT_205331
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Entry
MYCFIDRAFT_205331 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCFIDRAFT_205331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_205331
03036 Chromosome and associated proteins [BR:
pfj03036
]
MYCFIDRAFT_205331
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCFIDRAFT_205331
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
MYCFIDRAFT_205331
mRNA degradation factors
5'-3' decay
Decapping complex
MYCFIDRAFT_205331
Chromosome and associated proteins [BR:
pfj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
MYCFIDRAFT_205331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
CMS1
Motif
Other DBs
NCBI-GeneID:
19336381
NCBI-ProteinID:
XP_007931640
JGI:
205331
UniProt:
M2ZFH5
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MASGLADKLESTTLNDESPAGDYKQGLKAPPKDGRQQTEDVTATKGLEFEDFYLKRELLM
GIYEAGYEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSDKIQALL
LVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLRDDIIRLNEAVHIVVGTPGRILDLA
GKGVADLSEAKTFVMDEADKLLSPEFTVTIEQLLKFHPKDRQVMLFSATFPVVVKDFKDK
HMTDPHEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSRLQINQSIIFCNSTTRVELL
AKKITELGYSCFYSHAKMLQQHRNRVFHDFRNGAMRNLVCSDLLTRGIDIQAVNVVINFD
FPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYRIEQELGTEIQPIPASIDKKLYV
YDAPENIPRPINTAPQQKQIQQPSGRQQGNGQDLQNPANRTTGGYRGGRGGYRGGRGGGG
GQRYDQNGFQGQQRQGGYQQRPNQQQMAPAGPPAAQA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagggcttgcagacaagctcgagagcactacactcaatgacgaatcaccagcc
ggcgactacaagcagggcctcaaggcacctccgaaagatgggcgacagcagactgaggac
gtgacggcgacgaaaggcttggaatttgaggacttctacctcaagcgagaactcttgatg
ggcatatatgaagctggatatgagaagccctcaccaattcaagaagagaccatacccgtg
gcactgactggacgtgacattctggcacgagcgaagaacggcacaggaaagacagccgcc
ttcgtcatccctactcttgagcgcataaacccgaaatcagacaaaattcaggcccttctt
cttgtgcctacacgagagttggcattgcagacctcccaagtatgcaagacccttggaaag
caccttggcattaatgtcatggtcaccaccggcggtactggacttcgcgacgatattatt
cgattgaatgaagctgtacacattgttgttggaactcctggtcgtattttggatcttgca
ggaaagggcgtcgccgatctttcagaagccaagacttttgtcatggacgaggcagacaag
cttctgtctccagaatttaccgtcaccattgagcagcttctcaaattccaccccaaggac
cgccaggttatgctgttctctgccaccttcccagttgtggtgaaggatttcaaggacaag
cacatgactgacccacacgaaataaacctcatggatgagctcaccctccgcggtatcacg
cagtactacgcttttgttgaggagaagcagaaggtgcactgcctcaacaccctcttcagt
cgtctccagatcaaccagtccatcatcttttgcaacagcacgactcgagtagagttgctc
gccaagaagatcacagaacttggctactcgtgcttctactctcacgcgaagatgctgcaa
cagcatcgaaaccgtgtcttccacgacttccgcaatggtgccatgcgcaatcttgtatgc
tcagatctcctcacccgtggtatcgacattcaggctgtgaatgtcgttatcaatttcgac
tttccaaagaatgcggaaacctaccttcaccgtatcggtcgttccggtcgttttggtcat
ttaggtctggctatcaacttgatcaactgggaagatcgattcaacctctatcgcatcgag
caggaacttggcaccgagattcagcccatccctgcttccatcgacaagaagctctacgtt
tatgatgcaccagaaaacattcctagaccaatcaacactgcgccacagcagaagcaaatt
caacaaccatcaggcagacagcagggaaatggacaggacttgcaaaatcctgccaaccgt
accactggtggctaccgcggcggccgaggtggctaccgaggaggacgcggtggtggcggt
ggtcaacgttacgaccaaaatggcttccaaggccaacagagacagggcggctaccagcag
cggcccaatcaacaacagatggctccagctggtcctccagcggctcaggcatag
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