Pseudocercospora fijiensis: MYCFIDRAFT_205391
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Entry
MYCFIDRAFT_205391 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCFIDRAFT_205391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_205391
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
MYCFIDRAFT_205391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_16
TPR_22
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_7
ARM_TT21_5th
TPR_12
TPR_11
TPR_6
ARM_TT21_C
TPR_Slam
TPR_9
ANAPC3
TPR_20
TPR_MalT
TPR_10
DUF2225
TPR_4
Motif
Other DBs
NCBI-GeneID:
19336384
NCBI-ProteinID:
XP_007931774
JGI:
205391
UniProt:
M2ZFZ9
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MSTKAALKAAKTALDNKQYDQAIKQADAVLSSDPTNYFARLFLARALELQKKYDEAAKHY
RSAADAKPDDSQAWQGLLSVYEAQGSARLDEYREASVKVAQIFAAADDKHRAQSTIDKLT
EFTKLHGTAKQKKEVLKVLLPGGPIYDALEGRIPHASHTLTRLVEIAELEETQLISKEIN
EKRTRIGARVGQVTVEVKRDVYGKSELESLYQQIIDWSQDDEIRRQYEEKLLQRAYDHLV
VLPLDSKAAKLNQCLDLAEGMVIIHHHFRLAWDFVLESRDVDDLKDLDVGILREYLRSFP
ETGLSKILRGWLTSELSPFPALPKEDEDDDFAFAFEISPEDRLLLFTEGLPAAEQSPFAY
RLVSDYYLHLDEHESAADTARAGLKTLASESSKLGLTLQNTRDAISAVLGTALVHHQAPR
NHAEARRLFEDILARKPKFTSALIGLGLIFEETEDYQDAVDFLTRALHEDKGNVRVGTEL
AWCRALSGDYSRALTELDDFLQMIQADDPRAKDLRALTLYRTGICLWELDASKTARRDRS
GAYSRFLAAIKTNVNFAPAYTSLGYYYSDYARDKKRARQCFQKAFELSSSEVEAAERLAK
SFADQGDWDIVEIIAQRVVDSGRARPPPGSKKKGLSWPYSALGVVQMNKQEYQRAIVSFL
AALRISPDDYQSYVGLGESYHNSGRYNSALRTFNYALEPHDGIKMKVTGEKWFAKYMLAN
VHRELGDYDEAESGLRSVLEERPSEFGVLVSLLQNQVEHAGQCVEAGLFGRAIECAADAI
DVAIEIAKDVPNAFNLWKAVGDACAIFSWVQSATDDFPTETIRDGLLDRSSDQKMYELLS
EIDRVSLGALDKDGLNGTAAAVPSDPLIVSILAYKRAIHASSHDIHAQAVAWYNLGWMEQ
RAYACSDAKSGKKYLTTAVRCFKRAIELESGNAELWNALGVVTTTLNPKVAQHSFVRSLH
LNELNAKVWANLGVLYLLQNDIELAHQSFGRAQSTDPDYAHAWVGEGIIALMTGDVREAL
NHFTHAFEISDSASLITKRQYTISSFDHLLSTKATSNDLTRLIQPIFALEQLGTQRPKDL
PYRHLAALFLERVGDHVGAIESLVKLCESAEAEYEASESLASLARFALSKSDLARNQLAA
SQFSDAAENAALALDLSSDADSSGLAADARRKLRLSCHLTAGLAQYYLREISESVSMFKA
ALIESENDPDVVCSLVQVLWAQGGQAEKDVAREQLFEAVGNFPEHIGAVTLLGAIAALDD
DTDTTSAVKDDLLSLKTKDAITTKDFTDLELLLSALASLSTGGSVESEAQSAILLKPDDP
QAWSQLSELSGETEAADMALITAAQAVPPLGEMSSEDLSRAFAGVGTVGDAQRAIFLAPW
QDAGWSSMSEILS
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaaagcggccctgaaggcggcaaaaacggccctggacaacaaacaatatgac
caggccatcaagcaggccgatgcggtcttgtcctcggatcccaccaactactttgcaagg
ctattcttggcacgagcactcgaactgcagaagaaatacgatgaagctgcgaagcattat
cgctccgccgccgatgccaagcctgacgactcacaagcatggcaaggcctcctcagcgtt
tatgaggcccagggttcagcacgactagacgaataccgcgaggcctcagtcaaggtggcg
cagatttttgcggccgctgatgacaagcatcgagcgcagtcaacgatagataagcttacc
gaattcacgaaactccatggcacggcaaaacagaagaaggaggtgctcaaggttctgctt
ccaggcggcccaatctacgatgctctcgagggtcgcattccccatgcatcgcataccctc
acaaggcttgtggagattgccgaattggaagagacacaactcatctccaaggaaatcaat
gagaaacgaacgagaattggtgccagagtgggacaggtcaccgtggaggtcaagcgcgac
gtgtacggaaaaagcgaactcgaaagtctttatcaacaaatcatcgattggtctcaggac
gatgagattcgaaggcaatacgaagagaagttgctccagagggcctatgaccacttagtc
gtgcttcctcttgacagtaaggctgcaaagctcaatcagtgcctcgatctcgctgaaggt
atggtcatcatacaccaccattttcgcctcgcttgggactttgtcctggaatcaagagat
gtagacgacctgaaggatctggatgtgggcatcctgagagaatacctgcgctcattcccg
gagacgggtctatcaaagatcttgcgcggttggctgacgagcgagctgtcacccttcccg
gcccttcccaaggaggatgaagatgacgatttcgcgttcgcgttcgagattagcccggag
gaccgtctcttgttattcaccgaaggtttacctgctgcggaacagtcgcccttcgcatac
cgtctcgtgtcggactactacctgcatcttgacgagcatgagagtgccgcagacacggca
agagctggcttgaaaacgctagcctcagagtccagcaaacttggtcttactctgcagaac
acaagggacgccatcagcgctgtattggggacagctttggtccatcatcaagcaccccga
aatcacgctgaagcccgacgtctctttgaggatattttggctcggaaaccaaaattcaca
tcagctttgatagggcttgggctcattttcgaggagacggaagactaccaagacgccgtc
gacttcctgacacgagcactgcacgaagacaaagggaatgttcgtgtgggtacagagctt
gcatggtgtagggcactcagcggcgattactcacgtgcactaaccgaactggacgacttt
ctgcaaatgatacaagccgatgatccaagagcgaaagatctcagagccctcactttgtac
cgcacaggtatatgcttgtgggagttggacgcttcaaagacagctcgaagagatcgcagt
ggcgcgtacagtcgctttctggcagcgatcaagacgaacgtaaattttgcacctgcatat
acaagtcttggctactactattccgactatgcgagggacaagaagcgcgcccggcaatgt
tttcaaaaagcattcgagctctcctcctctgaagtcgaagccgctgagcgtctagccaaa
tcctttgcagatcaaggtgactgggacatagtagagatcattgcccagcgtgtcgtggat
tctggccgggcacgaccgcctcctggctccaagaagaaaggcctcagctggccatactct
gctcttggcgtggttcagatgaacaaacaagaatatcaacgcgcaattgtatcatttctt
gcagcattgcggatcagtcccgatgactaccagtcctacgttggactcggcgaaagttac
cacaattcgggccgctacaactccgcgctgcgcactttcaattacgctctggagcctcat
gatgggatcaaaatgaaggtcactggcgagaagtggtttgctaaatatatgctggccaat
gtacatcgagagctgggcgattatgatgaagctgaatcaggactgcgaagcgtgctcgaa
gaaagaccatcagaatttggagtcctcgtgtcgctgttgcaaaatcaagtagagcatgct
ggacagtgtgtggaggctggtcttttcggacgggccatcgaatgtgcagccgatgctatc
gacgttgccatcgagattgccaaagacgtgcccaatgcttttaatctctggaaagctgtt
ggagatgcttgtgctatattctcatgggttcagagcgccacggatgattttccgacggag
accattcgagatggtctcttggatcgttcttccgatcaaaagatgtacgagctgctttcg
gaaattgacagggtgtcactaggcgctctagacaaggacggcttgaatggcactgcagct
gctgtgccgtcggatccgcttattgtatcgattcttgcatacaagcgcgcgattcatgcc
agctcccacgatatacacgcgcaagctgtcgcttggtacaatctaggatggatggaacag
cgggcgtacgcatgtagcgatgcgaagtctggcaagaagtatcttaccacagcagtcaga
tgtttcaagcgagccatcgagcttgagtcgggcaatgcagagctctggaatgccctcggc
gtggtgacgacgacactgaatccaaaagtggcacaacactccttcgtcagatcgctgcat
ctgaacgagctcaatgccaaggtatgggcaaatcttggtgttctttaccttcttcagaac
gacatcgagctggcgcatcagtcgtttggaagggctcaaagcacagatccggactatgct
cacgcgtgggtcggagagggcattattgctcttatgactggagacgtgcgagaagccctc
aatcatttcacacacgcttttgagatctcagactctgcctcgctcatcactaagcgacag
tacacaatatccagctttgatcatttgctctcgacgaaagccacatcaaatgacctcacg
agactgatccagccaattttcgcactcgaacaactgggaactcagcggcccaaggatctg
ccatatcgccacctggcagctcttttcctcgagcgggtaggtgaccatgttggcgccatc
gaaagtctcgtcaaattatgcgagagcgcagaagcagaatatgaagcctctgagtcactc
gcctcgctagcacgattcgctctctcaaagtcagatcttgcaaggaatcaactggctgca
tcgcaattctccgacgcagcagaaaatgcggccctcgctcttgacctctcctccgatgcc
gatagtagcggcttagctgcagatgccagacgaaagcttcgactctcttgccatctcacc
gccggacttgcgcagtactatttgcgcgaaatcagcgagagcgtcagcatgttcaaagct
gcactcatcgaaagcgagaacgaccctgatgtggtatgctcgctagtgcaggtactgtgg
gcacaaggtggacaggcggagaaggatgttgcgagagagcaattattcgaggcagtgggc
aactttcccgagcacatcggggctgtaacactgcttggtgccattgcagctctggacgat
gacactgatacgacgagcgcggtgaaggatgatctgctcagtttaaagacgaaggatgcg
ataacaaccaaggacttcactgacctcgaacttctgctctctgctcttgcatccttgtca
accggtggctcagtcgagagcgaagcgcaatcagctatccttctgaagcccgacgatcca
caggcttggtctcagctttctgaactgtccggcgagaccgaggccgccgatatggctttg
attaccgcggctcaagctgtccctccgcttggagaaatgtcatcagaagatttgagtcga
gcttttgcgggagttggaacagttggtgacgcacaaagagcaatatttttggcgccctgg
caggacgccggttggtcatcaatgagcgagattttgagctga
DBGET
integrated database retrieval system
