Pseudocercospora fijiensis: MYCFIDRAFT_207390
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Entry
MYCFIDRAFT_207390 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_207390
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCFIDRAFT_207390
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
Pre-60S particles
Helicases
MYCFIDRAFT_207390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
19336585
NCBI-ProteinID:
XP_007925367
JGI:
207390
UniProt:
M3B619
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MDSLTEAEDPCSSAKISDGEVPHKPSSAWRILPKMKRKLNEHDVPEPSKTGKTTTTTTST
KAFASLDIDPRLLQAISKQKFTTPTPVQSRAIPLALTGQDVLARAKTGSGKTLAYLLPTV
HAILQRKAGSKKSKTTSVLILVPTKELATQVTNAAKDITSFCANAIRIENITRNEDANVT
RARLSEQPDIVIATPGRANQYYNQEVLKLNALKHLIIDEADLILGYEENDDVQAIAGALP
AGVQKMMVSASLSDQLDKLSLLFFPEGSQQPEILDLKSEEAKEKPTLAQYTVKTAEDEKF
LLLYAIFKLQLIKGKFIIFVADIDRCYRVKLFLEQFGIRSCVLNSELPVNSRLHVVQEFN
RGVYNTIIAADEAEVIGNEGGKRKKRREAEQEDEEVEQEAEAQDAEKENGDSSTSRPAKK
QRKSRNDREYGVSRGIDFQNVTCVLNFDLPQSNKSYTHRIGRTARAGQTGMALSFWVPKE
LYRKHKPTSIAQCEKDEEVITKIVKKQAEKGAEVKEWGLDWAKLEGFRYRLADALRAVTR
IAVREARTQELRNELIKSEKLKRHFEENPEDLKHLRHDTETHAVRSQPHLKHVPDYLLPQ
GGKQAVAKDVGYVGIRKDKENKIRKARAFNKARGKGRLAKGKGLDPLKSFNARGRGKK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggattctttaaccgaagccgaggatccctgctcatcggccaaaatttcagacggtgaa
gtgcctcacaaaccatccagcgcctggcgcatattgcccaagatgaagcgcaaattgaat
gagcacgatgtcccggagccttcgaagacgggcaagacgacaacgacgacgacttctaca
aaggccttcgccagcctagacatcgatccccgcctcctccaagccatcagcaagcaaaag
tttacaactccaacgcccgtacagtcgcgagccatccctctagcacttacaggccaagat
gtgctcgcgcgtgcgaagacaggttccggaaagacactggcatatcttcttcccactgtg
catgccatattacagcgaaaagcaggctcaaaaaagtccaagacaacgtcagtgctgatc
ctggttccaacgaaagagctcgcgacccaagtcaccaacgccgcgaaagatatcacatcc
ttctgtgcgaacgcgattcggatcgagaatatcacgaggaatgaggatgcaaacgtgaca
agagcaaggttgtctgagcagccggatatcgtgatcgcaaccccaggaagagcgaatcag
tattacaaccaggaagtcctgaaattaaacgcattaaagcatctgatcatcgacgaggcg
gatctgatactgggctacgaagagaatgatgatgtgcaagcaattgccggcgccttgccg
gctggcgtacagaaaatgatggtttctgcttccctctccgatcagttggacaagttgagc
ctgttgttcttccccgaaggctcgcagcagcctgagatcctggatctgaagtcggaagag
gcgaaagagaagccgactctcgcacagtacactgtgaagactgccgaagatgagaaattt
ttgttgctctacgcaatcttcaagctgcagctcatcaagggaaaatttatcattttcgtc
gcagatatcgatcgctgctaccgcgtcaagctctttttggagcaatttggcattcgcagt
tgtgtgctgaactcagagctcccggtcaacagtcggctacacgttgtgcaggaatttaat
cgcggtgtctacaacacgataattgctgcggacgaggctgaagtgattggcaatgagggc
ggtaagaggaagaagcggcgggaggccgagcaggaagacgaagaggttgagcaagaggcg
gaggcacaggacgctgagaaagagaatggtgactcatccacatcacggccagcgaagaag
cagcgaaaatcgaggaatgatcgcgaatacggtgtctcccgcggcattgacttccaaaat
gtcacttgtgtcctcaacttcgacctaccacaatctaacaagtcatatacgcatcggatc
ggccgtaccgcaagagcagggcagacaggtatggcactgagcttctgggtaccgaaagag
ttgtatcgcaagcacaagcctacgagtatcgcccaatgtgagaaggatgaggaagtcatt
acaaagatcgtgaagaagcaggctgagaagggagctgaagtgaaggagtggggacttgat
tgggcgaagttggaaggctttcgctaccgactggctgatgctctgcgtgcagtgactcga
atcgctgtacgtgaggctcgcacgcaggagctgaggaacgagctcatcaagagcgagaag
ctgaagagacatttcgaggagaatccagaggacttgaagcatttgcggcatgatactgag
acgcatgctgtgaggtcacagcctcatctgaagcatgtgccggattacctcctgccacaa
ggaggtaagcaagctgtcgcaaaggatgtaggatatgtgggcatcagaaaggacaaggag
aacaagattcggaaggcgagagcatttaacaaggcgagagggaagggaaggcttgcgaag
ggcaaaggactggatccgctgaagagctttaatgccagaggaagggggaagaagtag
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