Pseudocercospora fijiensis: MYCFIDRAFT_216349
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Entry
MYCFIDRAFT_216349 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03013
Nucleocytoplasmic transport
pfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MYCFIDRAFT_216349
03015 mRNA surveillance pathway
MYCFIDRAFT_216349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_216349
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_216349
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MYCFIDRAFT_216349
Spliceosome [BR:
pfj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
MYCFIDRAFT_216349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
DUF6739
Motif
Other DBs
NCBI-GeneID:
19338265
NCBI-ProteinID:
XP_007929949
JGI:
216349
UniProt:
M2ZJ81
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MPAALKTGADARAMRMTKYPDIFNKKVDMTKVNLPVIKKWVSDEIAKILNSDDDVVTEMI
FTIIEGSKSPNIKQLQTDITGFLDKDAAPFCLELWKLCLSAQDSPNGIPKELLEAKKLEL
IQERHGSASESESVASEVEAAEAVEVAAAIVLQTDVQCHATPDHHQEEADETREAALTAT
CPAEAAVDATILFDVDARHHMVDRHLAHVPRHVGADAATPRPPSLDLAHHLGGGTGPVAM
DRLGVDRGRLHRGDAADHLLTLMILAHLQTGADVDHPAHDHHRAVELATTAPVHAPVHLP
PSVVVESPET
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgcgctcaagactggcgctgatgcgcgcgccatgcgtatgaccaagtatcca
gacatcttcaacaagaaagttgacatgaccaaggtcaatctgccggtgatcaagaaatgg
gtgtcggacgagatcgccaagatcctcaacagcgacgacgacgtggtgacggagatgatt
ttcaccattattgaggggtcaaaatcgcccaacatcaagcagcttcagaccgatatcact
ggctttctcgacaaggacgccgcgccattctgcctcgaattgtggaagttgtgcctcagc
gcacaggacagcccgaatggcatcccgaaagagctgcttgaggcgaagaagctggagctc
atacaggagaggcacgggtccgcgagcgagagcgagagcgtggccagcgaggtagaggcg
gcagaggcggtcgaggtcgcggccgcgatcgttcttcagaccgacgtccaatgtcacgcg
actcccgatcaccaccaagaagaggcggacgagactcgagaagcggcattgacagctacg
tgcccggcggaggccgcggtggacgcgacaatcctcttcgacgtcgacgctcgccatcat
atggtcgatcgccatctcgctcacgttccccgccacgttggcgcagacgccgcaacacct
cgtcccccgagtctcgatctcgctcaccacctcggaggaggaacaggtccagtagcaatg
gaccggctcggcgtagatcgcggtcgcctccaccgcggagacgccgccgatcaccttctt
actctgatgattctcgctcacctccagacaggcgccgacgtcgaccatcccgctcacgat
caccaccgcgccgtcgagctcgcgacgacagctcccgttcacgctcccgtacacctgcct
ccaagcgtcgtagtcgagagtccggagacttga
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