KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_216436
Entry
MYCFIDRAFT_216436 CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCFIDRAFT_216436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfj03041]
    MYCFIDRAFT_216436
   03036 Chromosome and associated proteins [BR:pfj03036]
    MYCFIDRAFT_216436
Spliceosome [BR:pfj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MYCFIDRAFT_216436
 Complex B
    MYCFIDRAFT_216436
 Complex C
   U2 SnRNP specific factors
    MYCFIDRAFT_216436
Chromosome and associated proteins [BR:pfj03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    MYCFIDRAFT_216436
SSDB
Motif
Pfam: Ank_2 Ank SF3b1 Ank_4 Ank_3 PPP2R1A-like_HEAT TOR1L1_N Ank_5 HEAT_EZ HEAT_EF3_N Ank_KRIT1 Cnd1 Htt_N-HEAT_1 Adaptin_N XMAP215_CLASP_TOG mTOR_dom CEP104-like_TOG UNC45-central DUF6611 DUF5742
Other DBs
NCBI-GeneID: 19338275
NCBI-ProteinID: XP_007930136
JGI: 216436
UniProt: M3APP5
LinkDB
Position
Unknown
AA seq 1514 aa
MIAEEDDDIDDAEAWTELQLAAFQGDIVLVTRLLKESQEPNEPPRGFYGGTALQAAAISG
HLEVVKVLIDSGSFIDAPGGSNGGHAALALAAGAGHEAIVLRLLQAGADVNLQAHRYMGR
TPLQAACEGGDSAIVRVLLERGANANAPYAHHFGRSALQAAASGGYTQIAERLLAEGSDV
NAPPSKYRGMTALQAAASSGNFELVQKLMAAGAEVNAGGGYYMGATALAAAAEGGHLEIV
RLLLDAGADVSQRSGNHHHTPQEIAEYRDDVETAQLINRHAGKWHFEPVKLSPRKSAAAA
DMSDADFEKVRQAQAERNAASGKKGFKDSSSQRTNNNKISLAENFDKDLYDTSDKYAGYD
TSIAVDDDQDMEDADDGNDGRLVGQYTATAAQIGEWAQGETAEDDILQSREKQAQIASRE
SDYQQKRFTARTLNGDGQKSYRETMQEREIEREEARVQKLIEEQNKEKIANGDDEMEGVE
HQATLKDKTPEAEDRNATSEEAAAEKPRRRKRRWDNDDSASATNGNAETNGVNGHATNGD
AEPKKSRWDATPAVNGEAAAAPKKRSKWDLVSSADGGAAPQSNGASETPSAPVVAFGTDI
SSRNAPLSDEELDEMLPTEGYKILTPPPGYEPLRAPARRIAPSATPANTGGFMNQEPVDP
RSMGKQLPSDIPGVGDLQFFKAEDMAYFGKLVDGADENDLSVEELKQRKIMRLLLKVKNG
TPPMRKTALRQLTDNARSFGAGPLFDQILPLLMEKSLEDQERHLLVKVIDRVLYKLDDLV
RPYVHKILVVIEPLLIDQDYYARVEGREIISNLAKAAGLATMISTMRPDIDHVDEYVRNT
TARAFAVVASALGIPTLLPFLKAVCKSKKSWQARHTGVKIVQQIPILMGCAVLPHLKGLV
DCIGENLNDEQAKVRTVTSLALAALAEASNPFGIESFDDILNPLWTGARKQRGKGLAGFL
KAVGYIIPLMDEEYGNYYTSQIMEILLREFQSPDEEMKKVVLKVISQCAGGAGVTAQYLK
DTVLNDFFKSFWVRRMALDKRNYKQVVETTVDLGHKVGVGEIVERIVGNLKDESEAYRKM
TVETIEKVISAMGAADINERLEERLVDGILHSFQEQSVEDIVLLNGFGTVVNALGTRCKP
YLPQIVSTILWRLNNKSATVRQQAADLITRIAIVLKQCDEDVLLGRLSSVLYEYLGEEYP
EVLGSILGAMRSIVTVVGISSMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGRIADRGP
ESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLLNNLRVQERQ
SRVCTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMAKDYVY
AVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMLHLLNLLYPNLFETSPHVI
DRVIEAIDAIRLAVGTGAVMNYVWAGLFHPARKVRTPYWRLYNDAYVQSADAMVPYYPAF
DDEKLKRHELMVVI
NT seq 4545 nt   +upstreamnt  +downstreamnt
atgattgccgaagaagacgatgacattgacgacgcagaggcttggaccgagctacagctt
gccgcattccaaggcgacattgtattggtgaccagactactcaaggagagccaagagccg
aacgaaccgcccagaggcttttacggaggaactgctttgcaagcggctgcgatttctggc
catcttgaggtagtgaaggtattgattgactctggttcattcatcgatgctcctggagga
agcaatggcggtcatgcggcgcttgcccttgccgctggtgccggacatgaggccattgtg
cttcgattgctgcaagccggcgccgatgtgaacttacaagcccacagatacatgggccgt
actccgctccaggcagcttgtgaaggcggagactcagccattgttagagttctcctcgag
agaggcgccaacgcaaatgctccgtatgcgcatcactttggcaggtctgcactccaggcg
gccgccagcggaggatatactcagattgctgagcgcttgcttgctgagggtagcgatgtt
aatgcgcctccttcgaagtacagggggatgacagcactacaggcagctgcatcatcaggc
aattttgagctggtccaaaagctcatggccgcgggagcagaagtcaatgctggcggtggg
tattatatgggcgccacagctctggcggctgcagcagaaggtggccatctcgaaattgtg
agactcttactggatgctggagctgatgtgagccagaggtccggcaaccaccatcatacg
ccccaagagatcgcagagtatagggatgatgtggagaccgcgcagctgataaatcgacat
gccggaaagtggcatttcgagcccgtcaagctgtcgccgcggaagtccgccgccgcagcc
gacatgtctgacgcggacttcgagaaagtgcgccaagcgcaggcggagcgcaacgcggca
tcagggaagaaaggcttcaaggactcctccagccagcgcactaacaacaacaagatctcg
ctcgcggaaaacttcgacaaggatctgtacgacaccagcgacaagtatgctggctacgac
acctccatcgccgtcgacgatgaccaggatatggaagatgctgatgatggcaatgacgga
agattagtcgggcagtatacggctacggccgctcagattggagaatgggcacagggcgag
acggccgaggacgatatcctgcaaagtcgggagaagcaggcgcagatcgcgagcagagag
agcgactaccagcagaagcgcttcacagcgcgcactttgaacggcgacggccagaaatcg
taccgcgaaacgatgcaggagcgcgaaatcgagcgcgaggaggcgcgagttcaaaagctc
atcgaggaacagaacaaggagaagattgcgaacggcgatgatgagatggaaggcgtcgag
caccaggctacactcaaagacaagacgccagaggccgaagatcgaaatgcaacgagtgaa
gaagcagcagcggagaaaccaagacggcggaagcgaagatgggacaacgacgactcagca
tcagcaaccaacggcaatgccgagacgaacggcgtgaacgggcatgcgactaatggagat
gctgagccaaagaagtcgcgctgggatgcaactccagctgtgaacggagaggctgctgct
gcgccgaagaagaggtcgaaatgggaccttgtctcctcggcagatggaggtgccgcgccc
cagagcaatggcgcctcagagactccatcagcacctgtggtcgcttttggaacagacatc
agcagccgcaatgctcctttgtccgatgaggaactggacgagatgctccctactgaggga
tacaagatcttgacaccgcctcctggctacgagccgctcagagcacctgctcgacgcatt
gcaccatcagcgacaccagcgaataccggtggcttcatgaaccaggaaccggttgatcct
cgctcaatgggcaagcagctaccatcagacattcctggtgtcggtgatctccaattcttc
aaggcagaggatatggcttacttcggcaagcttgtggatggcgcggacgagaacgacctt
agtgtggaagagctcaagcaacgcaaaatcatgagattgctgctcaaagtcaagaacggc
accccgcccatgcgaaagaccgctttgcgacaattgacagataatgcgcgctcgtttgga
gctgggcctcttttcgatcaaatccttccactactcatggaaaaatctcttgaagatcaa
gaacgacatttgctagtcaaagtcatcgatcgtgtgctctacaaactcgacgacttagta
cgaccatatgtgcacaagatcttggttgttattgagccacttctcatcgaccaggactat
tacgctcgagtggaaggtcgagaaatcatctctaaccttgccaaggccgcaggtcttgca
acgatgattagtaccatgcgacccgacattgatcacgttgatgagtacgtgcgaaacacc
acagcccgtgctttcgcagttgttgcctctgcgcttggcattccaacactgcttccattc
ttgaaagcagtctgcaagagtaagaagtcatggcaagctcgacataccggagtaaagatt
gtgcagcagatccccattctcatgggttgcgctgtactgccgcacttgaagggacttgtt
gattgcatcggcgagaatctcaatgacgaacaggccaaagtgagaacggtcacttctctt
gctctagctgctctagctgaagcttcgaatcccttcggtattgaaagcttcgatgacatc
ctcaatcctctatggaccggtgccagaaagcagcgaggtaagggtctggccggcttcttg
aaggctgtggggtacattatccctcttatggacgaagagtacggcaactactacacatca
cagatcatggaaattctgctacgagaattccagtctcctgacgaggagatgaaaaaggtt
gtgctcaaggtcatcagtcaatgcgctggcggtgctggtgtcactgcgcagtacctcaag
gacaccgttctgaacgacttctttaagagtttctgggtgagaagaatggcccttgacaag
cgcaactacaagcaagttgtggagaccacagtcgatcttggacacaaggttggcgttggc
gagatcgtggagcgcattgttggtaacctcaaggatgaaagcgaggcctaccgcaagatg
accgtcgagaccatcgaaaaggtcatctctgcaatgggcgccgctgatatcaatgagcgt
ctcgaagaacgactcgtcgacggtattctgcactcgttccaggaacagagtgttgaggac
attgttcttctgaacggcttcggtactgttgtcaacgcgcttggcacccggtgcaagcct
tacttgcctcaaatcgtcagtacgatcctctggcggctcaacaacaaatctgcgactgtt
cgacagcaggcagcggacctcatcaccagaatcgccattgtgctcaagcagtgcgatgaa
gacgtgctgcttggcaggcttagctcggtgctgtacgaatatctcggtgaagaatatccg
gaagtcctcggtagcattcttggagctatgcggagcatcgtcactgttgtgggtatcagc
agcatgcagccacctatcaaggatctactacctcgcttgacgccaattcttcgaaatcga
cacgagaaagtgcaggaaaacacaatcgaccttgttggacgtattgcagaccgtggacca
gaatctgtcaatgccagagaatggatgcgtatctgtttcgagcttctcgacatgctgaaa
gcgcacaagaagggaattcgacgtgcagcaaacaacacctttggcttcattgccaaggcc
atcggcccgcaagatgtccttgctacccttctgaacaaccttcgagtacaagagcgtcag
tctcgtgtctgcacggctgttgccattggtatcgttgccgagacttgcgcgcccttcact
gtcctgccagcgctgatgaacgaataccgcgtgcccgaactcaacgtacagaacggtgtt
ctgaagtcactgtccttcctgttcgagtacatcggcgagatggcgaaagactatgtctac
gccgtcactccactcctcgaagatgcgcttatcgatcgcgaccaagtgcatcggcagacc
gctgcttctgtcgtcaagcatatcgcgctcggcgtcgttggcctcggctgcgaagatgcc
atgctccatcttctcaacctcctgtacccaaacctgttcgaaacctcgccgcacgtcatc
gatcgagtgatagaagcaatcgatgcgattaggcttgcggttggaacgggagcagtcatg
aattacgtgtgggctggcctcttccatcccgcacgaaaggtccgaacgccgtattggaga
ctgtacaacgatgcttacgtccagtcggccgatgccatggtgccatactacccggcgttt
gatgatgagaaactgaagagacatgagcttatggtggtcatttag

DBGET integrated database retrieval system