Pseudocercospora fijiensis: MYCFIDRAFT_216987
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Entry
MYCFIDRAFT_216987 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_216987
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
MYCFIDRAFT_216987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
19338340
NCBI-ProteinID:
XP_007931822
JGI:
216987
UniProt:
M3AKZ6
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MAPRKRVRDIHDVDGESDVEIESASSSFRMNSNHTKRTRIAIAQASRGSVVSDEEDFLNS
DTNDINIDDESDVETANNPDIDYSLRQDSSDDDCEDDGFDELKATQIVHRQFKEHRENIA
ADHGVVEEIYCTNFMCHAKLRITLGPLINFIIGHNGSGKSAVLTALQICLGTKASETSRG
RGLKALIKEGTDKATVGVTIKNEGESAYKPELYGRSITVERHFTHNSSGFKLKSAAGTTI
STKKSDLDDMLDYFSLQMDNPINVLTQDKARAFLSNSTPTEKYKFFMKGTQLEILNGDYK
LIEENLDNTSAKMRQKEEDIQVLKRQYEEADRRKKRSDNTRKMYARIKETQREWAWSQIE
VEEQELQRREQDVAKGRDDLTEAEQAAEEATAALEAQESAVDGQKRAIEEHQRSLRPLQE
AYNAAKEKWDNNRKALVDNKAEERRIQDDFKRAKRNIAQVSQEIETERQRLAGEHGEAHA
QRLIDLDRLKKLAVDAKQAHQDHEEGLPALEAAVVAAKQRWTEAKDPVEGARTEHERVKK
DLDTLQRDQGQKWGAYPRNSDKLCHAIERETRWRKKPIGPIGMHIAITKPLWSPIVERIC
GKTLNAFVVTCKYDRDILDQLANRVGASEMTVFITTDVHINVDEPDPAVDTVMRILNIES
EAIRNTLVINHAIEQTVLFEDLDKGRDFMFGEGHRPPNVRATITLHPHNKSAGQRWDYDP
YGGVKVGPVAPWQGRGRMIVDKQEEIRLASERVQEAARKRGQTEQHAQHMQNEHTKAGQA
VVAHKRESRRLKEAYQRADDNVDAKQAEIDANQPRDGRLQELQRQEEEHNQEKKAAEDSM
QDAAAQNAELNANARVLKDELEAADDEKFKVKDLIDKAEKKLSDLDDARKAALVRKNETY
DIIDLRKHELAELEEAVEQKKKQIEEWIPEAEKVAPERVPVNSTPDALEKLFNTLQADYE
KEQATQGGTRQQIAELWKKAAEDFRRAKKDHRTMRNVIQLLTKTLAERHRRWGLFRGHIS
MRTRINFNYLLTERNFRGRLNFKHSEKTLDLTVEPDMTKQSDTGRQTKTLSGGEKSFSTI
CLLLSIWEAMGSPIRCLDEFDVFMDSVNRLQSMKLMIQTARRSVGRQFILITPQAMGNVE
FHDDVTIHKMKDPERNREPGQQALDFGGA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacgcaaacgcgtacgagatattcacgatgtcgacggcgagtctgacgtcgaa
atcgagagtgcgagttccagcttccgcatgaacagcaaccataccaagcgaacacgaatt
gcaatcgcccaggccagccgcggttctgtagtgtcagacgaagaagactttctcaatagc
gatacgaacgacatcaatatcgatgatgagtctgacgtcgagactgcgaacaatccggac
atcgactacagcctaaggcaagactccagcgacgatgactgcgaagacgacggcttcgat
gagctcaaggcgacgcaaattgtgcataggcagttcaaggagcatcgtgagaacatagcc
gccgatcatggtgtggtcgaggaaatctactgcaccaacttcatgtgtcacgccaagctg
cgcatcacactaggtcctctgatcaacttcatcatcgggcacaacggaagcggcaagagc
gccgtactcacagcactgcagatatgtctgggcacaaaggcatcggagacctcgcgcggc
agaggccttaaggcgttgatcaaggaaggcaccgacaaagctaccgttggcgtcacgatc
aagaacgaaggcgaaagtgcctacaagcctgagctgtacggtcgcagcattaccgtagag
cgacatttcacccacaactccagtggcttcaagctgaaaagcgctgctggaaccaccatc
tccaccaagaaatccgatctcgacgacatgctggactatttcagtctccaaatggataac
ccgatcaacgttttgacgcaggacaaggcccgcgctttcttgtcgaacagcacgccgacc
gagaaatacaagttcttcatgaaaggcactcagctagaaattctcaacggcgattataag
ctcatagaggaaaacttggacaatacgagtgcgaagatgcgacagaaagaagaagacatt
caagtgctcaagcgacagtatgaggaggctgaccgtaggaagaagcgttccgacaatact
cgcaagatgtacgccagaatcaaggagactcaacgtgaatgggcgtggtctcaaatcgaa
gtcgaagagcaagaattgcagcggcgggagcaagacgtcgccaaaggcagagacgacctc
actgaggccgagcaagctgcagaggaagctacggctgccctcgaagcgcaagaatccgca
gtcgacggacagaaacgagccattgaagagcaccaacggtcactgcggccgttgcaagag
gcgtacaacgctgccaaggagaaatgggacaataaccgcaaagctttggtagacaacaag
gcagaagaacgcagaatccaagacgacttcaaaagagcgaaacgaaacattgcacaagtc
agtcaagagattgagaccgagcgacagcgcttggcgggcgagcatggagaggcacatgcg
cagcgtcttattgacttggaccggctcaaaaagttggctgttgacgcgaagcaagcacac
caagaccacgaagaaggtcttcccgcgctcgaagcagccgtggtggctgccaagcaacgg
tggaccgaagccaaagatcccgttgaaggcgctcgcaccgagcacgagcgtgtcaaaaaa
gacttggacactctccagcgcgatcagggtcagaaatggggagcctacccacggaattca
gacaagctgtgccatgccattgagagggagactcgctggcgcaagaaacccatcggacca
atcggcatgcacattgccatcacaaaaccactgtggagcccaatcgtggagagaatatgc
ggcaaaacgctgaacgcatttgttgtgacttgcaaatatgatcgcgacatcctcgatcag
cttgccaatcgagttggtgcctcagaaatgaccgtcttcatcaccaccgatgttcatatc
aatgtcgacgaaccagatcctgctgtcgacaccgtgatgcgaatcttgaatatcgaatcc
gaggcaattcgcaacactctcgtcatcaaccacgcaattgagcagaccgttctgttcgag
gacttggacaagggcagagacttcatgttcggcgagggtcatcgcccgccaaacgtgcgc
gctaccatcacattacaccctcataacaaatccgctggtcagcgttgggactatgatcct
tatggcggagtgaaagttggtcccgttgctccgtggcaaggtcgagggcggatgattgtt
gacaagcaagaagagatcaggctcgcctcagagcgtgtgcaggaagctgcacgtaagcgc
ggtcagacggagcagcatgctcagcatatgcaaaatgagcacaccaaggctggacaagca
gtcgtagcacacaaacgcgaatccagacggctgaaggaagcatatcagagggctgacgac
aatgtcgatgctaagcaagccgagatcgatgccaatcaaccgagagacggcaggctccaa
gagctgcagcgccaagaggaggagcacaatcaggagaagaaggctgcagaagattcgatg
caagatgcggctgcacaaaatgccgagttgaatgctaatgcgcgagtcttgaaggatgag
cttgaagcagctgacgatgaaaagttcaaggtgaaggacttgatcgacaaagccgagaag
aaactgtcagatctcgatgacgctcggaaagcagcactggtgagaaagaacgaaacctac
gacattattgatctgcgcaagcacgaactagctgaactggaagaggccgtggagcagaag
aagaagcagatcgaggagtggataccagaggcggagaaagtcgcccctgagcgagttccg
gtcaacagcactcctgatgccctcgagaagctgttcaatacattgcaggccgactacgaa
aaggaacaagccacacaaggagggacgcgacaacagattgcagagctgtggaagaaggcc
gcagaggacttcaggcgcgccaagaaagaccacagaaccatgcggaacgtgatccagcta
ctgaccaaaaccttggctgagcgtcaccgccgctggggtcttttccgcggccacatttcc
atgcgtacccgcatcaacttcaactacctcctcaccgagcgaaacttccgtggtcgtctc
aacttcaaacacagcgagaaaacgttggatctcaccgtcgagcctgacatgaccaaacaa
tccgatacaggacgtcagacaaagaccctcagcggtggcgaaaaatctttctccaccatc
tgcttgctcctgagtatttgggaagccatgggctcgccgatccgttgtctcgacgaattc
gatgtcttcatggatagcgtcaaccgtttgcaatccatgaaattgatgattcagaccgct
cggcggtcggttggaaggcaatttattctgattactccgcaggcgatggggaatgttgag
tttcatgatgatgttacgattcacaagatgaaggatccggaacgaaatcgagagcctggt
cagcaggctcttgactttggtggtgcttga
DBGET
integrated database retrieval system
