KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_23302
Entry
MYCFIDRAFT_23302  CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MYCFIDRAFT_23302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfj03021]
    MYCFIDRAFT_23302
   03019 Messenger RNA biogenesis [BR:pfj03019]
    MYCFIDRAFT_23302
Transcription machinery [BR:pfj03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     MYCFIDRAFT_23302
Messenger RNA biogenesis [BR:pfj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     MYCFIDRAFT_23302
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_4 zf-CCCH_2 zf-CCCH_3 zf-CCCH_9
Other DBs
NCBI-GeneID: 19338396
NCBI-ProteinID: XP_007929596
JGI: 23302
UniProt: M2ZJK7
LinkDB
Position
Unknown
AA seq 136 aa
RPICNDYRQSNGQQCPRGPHCPDRHYVPPSERSGIGHLICKHYQRGLCKKGDTCEFAHTF
NLRDEKECKEFSRYGICSQGDDCTSLHIPPTSELRRPACSHYARGFCPLGPYCNQRHVKH
QKLCPFYMAGFCPNGR
NT seq 408 nt   +upstreamnt  +downstreamnt
cgccccatctgtaatgactaccgccagtcaaacggccagcaatgtcctcgaggaccacac
tgcccggacagacattacgtcccaccttcagaacgctcaggaatcggccatctaatctgc
aaacactaccaacgcggcctgtgtaagaaaggcgatacctgcgagttcgcccacaccttc
aacttgcgcgacgagaaggaatgcaaagaattctcacgatacggcatctgctctcaaggc
gacgactgcacatccctccacatcccacccacctcagagctccgtcgaccagcatgctca
cattacgcgcgaggcttctgtcccctcggaccctactgcaatcaaagacatgtcaagcat
caaaagctgtgtcccttctacatggcgggtttctgtccgaacggccgc

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