Pseudocercospora fijiensis: MYCFIDRAFT_23302
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Entry
MYCFIDRAFT_23302 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCFIDRAFT_23302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfj03021
]
MYCFIDRAFT_23302
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_23302
Transcription machinery [BR:
pfj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MYCFIDRAFT_23302
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MYCFIDRAFT_23302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
19338396
NCBI-ProteinID:
XP_007929596
JGI:
23302
UniProt:
M2ZJK7
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
RPICNDYRQSNGQQCPRGPHCPDRHYVPPSERSGIGHLICKHYQRGLCKKGDTCEFAHTF
NLRDEKECKEFSRYGICSQGDDCTSLHIPPTSELRRPACSHYARGFCPLGPYCNQRHVKH
QKLCPFYMAGFCPNGR
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
cgccccatctgtaatgactaccgccagtcaaacggccagcaatgtcctcgaggaccacac
tgcccggacagacattacgtcccaccttcagaacgctcaggaatcggccatctaatctgc
aaacactaccaacgcggcctgtgtaagaaaggcgatacctgcgagttcgcccacaccttc
aacttgcgcgacgagaaggaatgcaaagaattctcacgatacggcatctgctctcaaggc
gacgactgcacatccctccacatcccacccacctcagagctccgtcgaccagcatgctca
cattacgcgcgaggcttctgtcccctcggaccctactgcaatcaaagacatgtcaagcat
caaaagctgtgtcccttctacatggcgggtttctgtccgaacggccgc
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