Pseudocercospora fijiensis: MYCFIDRAFT_25225
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Entry
MYCFIDRAFT_25225 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MYCFIDRAFT_25225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_25225
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MYCFIDRAFT_25225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_23
AAA_21
DUF5740
AAA_27
ABC_tran
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
19338419
NCBI-ProteinID:
XP_007919684
JGI:
25225
UniProt:
N1QAJ2
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MAHDSFCTDKLIETPGTVFSSPSRHAKKKVNYAESDDDDDDDAPFKPVSGNGRAAKRRRI
SVKDDSDDDEFGLDAATLAAMEIDEEMDDFVVDDDLEDDEKPKKPKKKASASSSAKASNH
SSVRSPSPSPFREASEEAPTKSTAQQWTFDPDAPPSTEPRKRPTVVKSTSNGPPKKQKAH
ATDPADRYPWLAAIQDADRHTPDHPDYDPRTLYVPPGAWNNFSPFEKQYWEIKCKFWDTI
VFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARV
DQMETALGKDMRERDQKGAAKKKEEKVIRRELASVLTAGTLVEGSMLQDDMATYCAAIKE
TESEGKPAFGIAFVDTATAQFHLAEWVDDADMTRFETFVAQTRPGELILEKGCISARALR
ILKNNTPPTTIWNYLKPDKEFLSADKTRMKMNGEAYFVKSEDDEAADSWPKVLREAETKE
NTFSAYGALVWYLSMLKIERDLITCANFSWYNPIRKASSLVLDGQSLINLEIFANTFDGS
TEGTLFTMLNRCVTPSGKRTLRQWVCHPLADARKINERFDAVDALNADGTVMDRFTASLS
RLPDLERLISRVHAGRCKVQDFVKVLEGFEQIEYTMSLLSSFGDGEGLLGQLISAMPNLQ
TPLNHWKEAFDRKQAKEQGLLIPQPGVEDDFDESQERVDGVEKELNKLLQRARKDLGSSA
IKFTDNGKEIYQLEVPIKVKGNIPKNWKQMSATKQCKRWYSPELEGLVQDLKEAQEMHAQ
VVKALAGRFFARFDEDYTTWLAAIKIIGQLDCLISLAKASSSLGSPSCRPEFIEDDHARS
VLEFQTLRHPCIETTTNFIPNDIALGGDQASITLLTGANAAGKSTILRMTCIAVILAQIG
CYVPCESARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEATPRSLVILDELGR
GTSSYDGVAVAQAVLHHIATHVGSLGYFATHYHSLAAEFQKHPEVIAKRMAVKVDDDIRD
VTFLYHLEDGVAEGSYGMHCAAMCGIPDKVITRAEQAAENWEHTGRIKESLEKAMESSWL
PLGLLSDVSWLLKERSEEDENISDGSLEVLRKAIAAL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgattcgttctgcactgacaaactgatagaaacgccaggcacggtcttctcg
agcccgtcgcgacacgccaagaagaaggtcaactatgctgaatccgacgatgacgatgac
gatgacgctccgttcaagccagtttctggcaatggacgcgctgctaagcggcgtcggatc
agtgtcaaagacgactcggatgatgacgagttcggtctcgatgccgccaccctagccgcg
atggagatcgatgaagaaatggacgacttcgtcgttgatgacgaccttgaggatgacgag
aagcctaagaagcctaagaagaaggcttcagcctcgtcctcagcaaaagcatcaaatcac
agctccgtcagatcgccttcaccttcgccgttcagagaagccagtgaggaggctccaaca
aagtcgactgcccaacaatggacctttgatccggatgcaccaccatcgaccgagccaagg
aagcgtccgactgtcgtaaaatcgacgagcaatggcccgccaaagaagcagaaggcccac
gcaacggatcctgcagatcggtatccttggttagctgccattcaagatgctgaccgacat
actcctgatcacccagactatgatcctcggacactctatgttccacctggagcgtggaac
aacttctcgccattcgagaagcagtattgggagatcaagtgcaagttctgggacacgatc
gtctttttcaagaaaggcaaattctacgagctttacgagaatgatgctaccatcggccac
cagctgttcgatctaaagctcactgatcgagtcaacatgcgaatggttggcgtgccggag
gctagtctcgatcactgggcaaatcagttcgtggcaaaaggattcaagatcgccagggtt
gatcaaatggagacagcacttggcaaagacatgcgagaacgcgaccagaaaggtgcagca
aagaagaaagaagagaaggtaatccgcagagaacttgcgtcggtattgacagccggtact
ctggtggaaggcagcatgcttcaagacgacatggccacttattgtgctgctatcaaggag
accgagagcgaaggcaagcctgccttcggtattgccttcgttgacaccgctacggcgcaa
tttcatcttgcggagtgggtcgacgatgcagacatgacccgcttcgaaacatttgtcgcg
cagacacgtcctggagagctcatcctcgaaaaaggctgcatctctgcaagagcgcttcga
atacttaagaacaacactcctcccacaacaatctggaactatctcaagccggacaaggag
ttcctgagcgccgacaagactcgcatgaaaatgaatggagaagcatacttcgtgaagtct
gaagacgacgaagcagctgacagttggccgaaggtcctgcgcgaagctgagacaaaggag
aacactttctctgcctatggcgccctcgtatggtacttgagcatgctcaagatcgaacga
gacttgattacctgtgccaacttttcctggtacaatcccatacgcaaagcttccagcttg
gtccttgacggccagagcctgatcaacctggaaatcttcgccaataccttcgatggtagc
accgaaggcacgctcttcacaatgctcaaccgatgtgtcactccatctggcaagcgcacg
ttgcggcagtgggtatgccatccacttgctgatgcaagaaagatcaatgaacgctttgat
gctgtggatgctctcaacgccgacggcactgtcatggataggttcactgcatcattgtcg
cgcctgcctgatctcgagagattgatttctcgcgtgcatgcagggcgctgcaaagtgcag
gactttgtcaaagtgcttgaaggcttcgaacagatcgagtacacaatgtccctcctcagc
tcgtttggtgacggcgagggtcttcttggacagcttatctcagctatgccaaacctgcag
acacctttgaaccactggaaggaagccttcgaccgcaagcaagcaaaggaacaaggactg
ctcattcctcagcctggtgtcgaggacgattttgacgaaagtcaagagcgcgtggacggc
gtcgagaaagagcttaacaagctgttgcaacgagcaagaaaggacctaggatccagtgcc
atcaaatttaccgataatggaaaggagatctatcagcttgaggtacccatcaaggttaag
ggtaacatcccaaaaaactggaagcagatgtctgcgacgaagcagtgcaagcggtggtac
tcacctgaattggaaggactggtacaggatcttaaggaggctcaggaaatgcatgcccaa
gtcgtcaaggcattggcaggtcgcttcttcgcccgttttgatgaggactataccacctgg
cttgcagccatcaagatcattggtcagcttgactgcctgatatcgcttgcaaaggcctcc
tcttcacttggatcgccgtcttgccggcccgaattcattgaagacgaccacgctcgcagc
gtgctcgaattccaaacactccgccacccatgcatcgaaactacgacgaacttcatcccc
aacgacattgctcttggcggtgaccaggcctccatcactttgcttacaggtgccaatgcc
gctggtaaatcgaccattttgcgcatgacttgcattgcagtcatccttgcccagatcggc
tgctacgtgccctgcgagtccgctcgcatgacacctgtcgaccgaatcatgtctcgcctg
ggagctcacgataatatttttgccgggcaaagcaccttcatggttgagctcagcgaaacc
aagaagattctggcagaagctacaccgcgctctctggtcatcctggacgaacttggacgt
ggaacaagcagttacgacggcgttgccgttgctcaagccgtgctccatcatatagccacc
catgttggctctctcggatacttcgccacgcattatcattctctcgcagcggagttccag
aagcatcctgaagtcatcgcgaagcgtatggctgtcaaggttgatgatgatattcgcgat
gtgacgttcttatatcacctcgaagatggtgtggcagagggcagctatggtatgcattgt
gctgccatgtgtggaatacctgacaaggtcatcacacgtgctgagcaagctgctgagaac
tgggagcatactggaaggatcaaggagagcctcgagaaagcgatggagagtagctggttg
ccacttggtctgctgagtgatgtcagctggctgctcaaagagcgctccgaggaggatgag
aatatttctgacggaagtttggaagtgttgaggaaagccattgcggcgttgtag
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