Pseudocercospora fijiensis: MYCFIDRAFT_25451
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Entry
MYCFIDRAFT_25451 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCFIDRAFT_25451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_25451
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MYCFIDRAFT_25451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP-eEF1A_C
MMR_HSR1
GTP_EFTU_D2
Roc
Beta-barrel_SelB
FeoB_N
Gtr1_RagA
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
19338436
NCBI-ProteinID:
XP_007919701
JGI:
25451
UniProt:
N1QCT3
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
LKSKGLDVPSIWDREKFKRGSAAFVVIGHVDHGKSTLMGRLLLDTGAVTQRDIDKYKKQA
TEMGKASFALAWVMDTGSEERARGVTVDIAQHHFSTDSMDFTILDAPGHRDFVPNMIGGA
SMADLAVLVVDANQLESGMKGQTREHILLAHAVGLRRIVVAVNKLDATTPAWSEEAFRNV
RDEVLKLLAKTGFSRDNIAVIPCSGLSGENVVSAPSEHSEAAWVRAKHPTLLQQLEKSSA
SSNVSVELVKAPARMQIADVFRGGITNPISISGLLRNGSLQTGDTIIVQPSGESASIKGI
EVRGTSKEWTVAGQIPTLHLQDIDAQHLRSGDVACGEEKAVKVVKNVIAQVTAFEPLLPQ
EADVHIGRLHVPGLISQLFSTMNARDEVIRKKPRIVKAGQRAVIRLGLDDGVPLEAGDRI
VLRSKGNTIAAGTVQQVGS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ctcaaaagcaaaggcctcgatgtgccatcgatatgggacagggagaagttcaagcgaggg
tctgcagcatttgttgtcatcggccacgttgaccatggcaagagtacgctcatgggccgc
ctgttgctcgatacaggcgcagtgacacaacgagacatagataaatacaaaaagcaagcg
acagaaatgggcaaggcgtcatttgcgctggcgtgggttatggatactggctcggaggag
cgtgctcgtggcgtcactgtagatatcgcccagcatcacttcagcacagacagtatggac
ttcaccattctcgacgcgccgggacatcgcgattttgtgcccaacatgattggtggtgca
tcgatggcagaccttgctgttcttgttgttgacgcaaatcaactagagtcagggatgaaa
gggcaaacgagggagcacattctactggcacatgcggtcggcttgcgacgcatagtcgta
gccgtcaacaagctggacgctactacaccagcctggagcgaggaagcctttcgaaatgtg
agggacgaagttctcaaactgctcgcgaaaactggcttctccagagacaacatagcggtc
atcccttgcagtgggctgagcggcgagaacgttgtctctgctccctcagaacactcggag
gcagcctgggttcgggcgaaacatcctacgttgttgcaacagctagagaaatcatcagca
tcgtccaatgtctcggtagagcttgtcaaagcaccagctcgcatgcagattgcggatgtt
tttcgaggcgggattaccaatcccatttcaatctccgggctgctacgtaatggtagcctg
cagacaggcgacacaatcatcgttcaacccagtggagaaagtgcttcgatcaagggtatt
gaggttcggggaacgagtaaagagtggacagtggctgggcaaataccgactctgcactta
caagacatcgacgcacagcatttgcgcagtggagacgtcgcctgtggagaagagaaggct
gtgaaggttgtcaagaacgtcattgcgcaagtgactgctttcgaacctttactgccacaa
gaagctgatgtgcacattgggcgtcttcacgtgccggggcttatcagtcaattgttcagc
acaatgaacgctagagatgaggttatcaggaagaagcccagaattgtcaaggctggccaa
agggctgtcatccggctgggccttgatgatggtgtgccgctggaagctggcgaccggatc
gtgctgaggagtaaaggcaacaccattgctgcagggacagtccagcaagtaggcagctaa
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