KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_25537
Entry
MYCFIDRAFT_25537  CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCFIDRAFT_25537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfj03041]
    MYCFIDRAFT_25537
Spliceosome [BR:pfj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    MYCFIDRAFT_25537
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd PRP4 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_NOL10_N eIF2A
Other DBs
NCBI-GeneID: 19338440
NCBI-ProteinID: XP_007919705
JGI: 25537
UniProt: N1QCQ2
LinkDB
Position
Unknown
AA seq 517 aa
MSIHPSRQAYVEEEVSTVSNTNYQIRDPNTGQSQHASTVLGEFARKRRANALAVPTDDAR
VRQELRSRGEPITLFGERKEDRRDRLRELLLGEQEGGAADEDESMADADEDGEGDEEGEF
YIEGSQSLLVARRDLAKYSLPRATKRLAYQKQESKIPVQSHVKHRKAIKEKLGGVELFGS
QIASERPVSIVRFAPNGEVVASGDWGGSVKLLDVPNLESKMVLRGHTGMVGGISWFPGAT
LSGSTVSPDSLNLATSAADNEIHLWSLSQDTPISTLGGHSARICRIDFHPSGKYLASASY
DTTWRLWDVATTTELLLQEGHSKEVYTVSFNEDGSLVASAGLDSIGRIWDMRTGRTAMIL
EGHVGPIHAMDWSCDGYRIMTGSADGFAKCWDMRAVRETASIGAHVGGVSDLRWYKGTDG
PLSGHQLQADTAMTNGDSNDDSTSQVQPKKAGTFLVSSGFDKAVNIFSADDWALCKSLTG
HDGTVLSVDVTTDAKFIASCGRDRTVKLWARDDMEGI
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgtccatacatccgtcgcgacaagcatatgtggaagaagaggtaagcaccgtctccaat
accaactaccagatccgcgacccgaatactggccagtcgcaacatgcatcgaccgtgtta
ggtgaatttgcccgaaaacgcagagcgaatgcattagcagtacccaccgacgatgcccgc
gtgcggcaggagcttcgatcacgaggtgaacccattactctgttcggcgagcgtaaagaa
gatcgtcgtgaccgattacgagaattgctgttgggtgagcaggaaggcggcgctgcggac
gaagatgaatcgatggcagatgccgatgaggatggtgagggcgacgaagaaggagaattc
tacattgaaggcagccagtccctgctcgtcgccagaagagacctcgcaaaatactcgctg
cccagagccacgaagcgactcgcatatcagaagcaggaaagcaagatcccggtccagtcg
catgtcaagcatcggaaagcgatcaaagaaaagctaggaggcgtcgagctctttggcagt
cagattgcgagtgagaggcctgttagtatcgttcgctttgcaccgaatggcgaggtggtg
gcctctggagattggggaggcagtgtgaaactgcttgacgtgcccaatctggaatccaaa
atggtactacgtggacacacgggaatggttggaggcatctcgtggtttccaggagcaaca
ttatctggctctacagtgtctcccgatagtctgaacctcgctacatccgctgccgacaac
gaaattcatctatggtcactctcgcaagacacgccaatatcaacgctaggcggccacagc
gcccgaatctgccggattgatttccatccctcaggaaaatatctcgcaagcgcaagctac
gacacaacatggcgattgtgggatgtggcgaccacgacagagctgttgcttcaggaaggt
catagcaaagaagtctatacggtctccttcaacgaagatggcagtcttgtcgcttcagct
ggtctcgattccataggtcgcatctgggacatgcgaactggccggactgctatgattctc
gaaggtcacgtcgggcccatccatgccatggactggagttgtgatgggtatcgaataatg
accggaagtgccgatggttttgcaaaatgctgggatatgcgcgctgtacgcgagactgca
agtatcggcgctcacgttggaggagtgtctgacttgaggtggtacaaaggcactgatggt
ccgctctctggccatcaattgcaagcagatacggctatgaccaacggagatagtaacgac
gacagtacatcacaggtgcagcccaagaaggctgggacattcctggtcagcagtggcttc
gacaaggctgtgaacattttctcggcggacgactgggcgctgtgcaagtctctgactggc
cacgatggtactgttctttcagtcgatgtcacaacggatgcaaaattcatcgcttcgtgt
ggccgcgaccgcacggtaaagctttgggcgagagacgacatggagggcatttga

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