Pseudocercospora fijiensis: MYCFIDRAFT_25537
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Entry
MYCFIDRAFT_25537 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_25537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_25537
Spliceosome [BR:
pfj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MYCFIDRAFT_25537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
PRP4
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
19338440
NCBI-ProteinID:
XP_007919705
JGI:
25537
UniProt:
N1QCQ2
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MSIHPSRQAYVEEEVSTVSNTNYQIRDPNTGQSQHASTVLGEFARKRRANALAVPTDDAR
VRQELRSRGEPITLFGERKEDRRDRLRELLLGEQEGGAADEDESMADADEDGEGDEEGEF
YIEGSQSLLVARRDLAKYSLPRATKRLAYQKQESKIPVQSHVKHRKAIKEKLGGVELFGS
QIASERPVSIVRFAPNGEVVASGDWGGSVKLLDVPNLESKMVLRGHTGMVGGISWFPGAT
LSGSTVSPDSLNLATSAADNEIHLWSLSQDTPISTLGGHSARICRIDFHPSGKYLASASY
DTTWRLWDVATTTELLLQEGHSKEVYTVSFNEDGSLVASAGLDSIGRIWDMRTGRTAMIL
EGHVGPIHAMDWSCDGYRIMTGSADGFAKCWDMRAVRETASIGAHVGGVSDLRWYKGTDG
PLSGHQLQADTAMTNGDSNDDSTSQVQPKKAGTFLVSSGFDKAVNIFSADDWALCKSLTG
HDGTVLSVDVTTDAKFIASCGRDRTVKLWARDDMEGI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtccatacatccgtcgcgacaagcatatgtggaagaagaggtaagcaccgtctccaat
accaactaccagatccgcgacccgaatactggccagtcgcaacatgcatcgaccgtgtta
ggtgaatttgcccgaaaacgcagagcgaatgcattagcagtacccaccgacgatgcccgc
gtgcggcaggagcttcgatcacgaggtgaacccattactctgttcggcgagcgtaaagaa
gatcgtcgtgaccgattacgagaattgctgttgggtgagcaggaaggcggcgctgcggac
gaagatgaatcgatggcagatgccgatgaggatggtgagggcgacgaagaaggagaattc
tacattgaaggcagccagtccctgctcgtcgccagaagagacctcgcaaaatactcgctg
cccagagccacgaagcgactcgcatatcagaagcaggaaagcaagatcccggtccagtcg
catgtcaagcatcggaaagcgatcaaagaaaagctaggaggcgtcgagctctttggcagt
cagattgcgagtgagaggcctgttagtatcgttcgctttgcaccgaatggcgaggtggtg
gcctctggagattggggaggcagtgtgaaactgcttgacgtgcccaatctggaatccaaa
atggtactacgtggacacacgggaatggttggaggcatctcgtggtttccaggagcaaca
ttatctggctctacagtgtctcccgatagtctgaacctcgctacatccgctgccgacaac
gaaattcatctatggtcactctcgcaagacacgccaatatcaacgctaggcggccacagc
gcccgaatctgccggattgatttccatccctcaggaaaatatctcgcaagcgcaagctac
gacacaacatggcgattgtgggatgtggcgaccacgacagagctgttgcttcaggaaggt
catagcaaagaagtctatacggtctccttcaacgaagatggcagtcttgtcgcttcagct
ggtctcgattccataggtcgcatctgggacatgcgaactggccggactgctatgattctc
gaaggtcacgtcgggcccatccatgccatggactggagttgtgatgggtatcgaataatg
accggaagtgccgatggttttgcaaaatgctgggatatgcgcgctgtacgcgagactgca
agtatcggcgctcacgttggaggagtgtctgacttgaggtggtacaaaggcactgatggt
ccgctctctggccatcaattgcaagcagatacggctatgaccaacggagatagtaacgac
gacagtacatcacaggtgcagcccaagaaggctgggacattcctggtcagcagtggcttc
gacaaggctgtgaacattttctcggcggacgactgggcgctgtgcaagtctctgactggc
cacgatggtactgttctttcagtcgatgtcacaacggatgcaaaattcatcgcttcgtgt
ggccgcgaccgcacggtaaagctttgggcgagagacgacatggagggcatttga
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