Pseudocercospora fijiensis: MYCFIDRAFT_28454
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Entry
MYCFIDRAFT_28454 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_28454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_28454
Spliceosome [BR:
pfj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MYCFIDRAFT_28454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
BSP_II
Motif
Other DBs
NCBI-GeneID:
19338629
NCBI-ProteinID:
XP_007919871
JGI:
28454
UniProt:
N1QCF4
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MATIADELLNDFEDSGDENDDQVDENEFGTNDATQDFAAPQQNGGGMELDSDEEEVGEEN
DEDLLPDHLKKEEEETEEETKARVERMALRSVSDVRSVAGLMKQLDPLLEKINHYRTLPP
GQETKNIGRVEDNPEYKVLTQSNTLSTQIDGEIILVHKFIRDHYSVRFPELETLIQNPLD
YARTVGIIGNGPMDNIKSISESKDNVVGASLKQILDGPSLMVVTVEATNTSGTPLSDTEL
ATVRRACQMILRLDSAKKTLTDYVQSRMSIFAPNLTALIGSATAAQLINYAGGINGLAKT
PACNIPPLGNKKSARATGLATNVGVRNQGVLYNNDIIRAVPQDLKVQAMRILSAKVVLAA
RIDSQHSSPSGEQGLALAEQVEKRINKLSEAPPNSGIKALPAPDDKPSRKRGGRRVRKMK
EATAMTDLRKAQNRMAFGKEEAEVGFGDSSKGLGMIGAQDDGRIRATQIDQRTKAKLSKK
NPGWGGATPAGGSGTATSLRGFGGGPAAPGALRAQGLRAAGVGSGLKTNVGGQPSGTIST
VAFTPVQGIELVDPKVRDEMNRKRKAEEDRWFKSGTFTQLGGPSTAAQPAKVDSQGFKVP
SLPVKKQKQGD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgattgcggacgaacttctgaacgacttcgaggacagcggcgatgagaacgat
gatcaggtcgacgagaatgagtttggcacaaacgatgcaacacaagacttcgcagcgcca
cagcagaatggcggcggaatggagcttgacagcgatgaggaagaagtcggcgaagaaaat
gacgaggacttgctacccgatcatttaaagaaagaggaagaggagacagaagaagagacg
aaggcgcgtgtagagcgcatggctttgcgaagcgtcagcgatgtgcgcagcgtagcaggt
ctcatgaagcagctggatccactactcgagaaaatcaaccattatcggactttaccacct
gggcaagaaaccaagaacattggaagagttgaggacaatccggagtacaaagtgctcaca
caatccaacaccctctccacccaaattgatggtgaaatcatcctcgtgcacaagttcatt
cgcgatcactactccgtacgctttccggagctcgagacgctgatccagaatccgctcgac
tatgctcgtaccgtgggaatcatcggcaatggtcctatggacaacatcaagtccattagt
gaaagcaaagacaatgtcgtcggcgcatcgctcaagcagattttggatggtccctcgcta
atggttgtcactgtcgaagccaccaacacctccggaactcccctctcagacacggagctt
gcgactgtacgtcgggcatgtcaaatgattttgaggctagactcggcgaaaaagacgttg
acagactatgtgcaatcacgaatgtctatatttgcacccaacttaactgcgctgataggt
tccgcaactgcagcacagctcatcaactatgcgggtggtattaacggtctcgcgaagact
ccagcatgcaacatcccgccacttggcaacaagaaaagtgcacgagcaacaggtctggct
acaaatgtgggtgtgcgaaaccaaggcgtgctctacaacaacgacatcatacgcgctgtt
ccgcaagatctcaaggtgcaagctatgcgcattctctctgcaaaagtcgtgctcgctgcc
agaattgatagccagcactcatcaccttcgggtgagcaggggttggccttggcggaacaa
gtagagaagcgcatcaataaactatccgaagcacccccgaacagcggtatcaaagctctt
ccggcaccggacgacaaaccaagcagaaagcgcggtggacgaagggtacggaagatgaag
gaagcgacagccatgacagatctgcgcaaggctcagaaccggatggcatttggtaaagaa
gaagctgaagttggctttggcgacagctcgaagggtctgggcatgattggggcgcaggat
gatggacgaatccgagcaacacagatcgatcaacgaacgaaagcaaagctatcgaaaaag
aatcctggctggggaggcgcgactcctgctggtggttctggcactgcgacatcgcttcgt
ggatttggcggaggtcctgcagcacctggagctctaagagcccagggtctacgagctgca
ggtgttggcagtggtctgaagacgaacgttggtgggcagccaagtggtacaatttcgact
gtagcttttactccggtccagggtatcgagctcgtcgaccccaaggtgcgcgatgagatg
aacagaaagcgaaaggccgaagaggatcgatggttcaagagtggcacgttcactcaattg
ggaggtcccagcacagcggctcagcctgcgaaggtggattcacaaggcttcaaggtcccg
tccctaccagtcaagaagcagaagcagggcgattga
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