Pseudocercospora fijiensis: MYCFIDRAFT_29007
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Entry
MYCFIDRAFT_29007 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03030
DNA replication
pfj03420
Nucleotide excision repair
pfj03430
Mismatch repair
pfj03440
Homologous recombination
pfj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCFIDRAFT_29007
03420 Nucleotide excision repair
MYCFIDRAFT_29007
03430 Mismatch repair
MYCFIDRAFT_29007
03440 Homologous recombination
MYCFIDRAFT_29007
03460 Fanconi anemia pathway
MYCFIDRAFT_29007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfj03000
]
MYCFIDRAFT_29007
03032 DNA replication proteins [BR:
pfj03032
]
MYCFIDRAFT_29007
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_29007
Transcription factors [BR:
pfj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MYCFIDRAFT_29007
DNA replication proteins [BR:
pfj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MYCFIDRAFT_29007
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MYCFIDRAFT_29007
MMR (mismatch excision repair)
MYCFIDRAFT_29007
DSBR (double strand breaks repair)
HR (homologous recombination)
MYCFIDRAFT_29007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CDC24_OB3
RMI1_C
Motif
Other DBs
NCBI-GeneID:
19338669
NCBI-ProteinID:
XP_007927924
JGI:
29007
UniProt:
M3AV86
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MTDAFNAITHGALRQITEGNPVENPILQCVQIKPMAQGAGGTERWRVVFNDTVNFIQGML
SSQSNHLITDGHLKKGSVCRLTQYQANFVKDKHILIIMNLDVLHEYGEQDKLGSPVALDA
AKPEAQEDVKPQPGNIAGNNFYGQKPQQAQLQQQQQQRSLPSRTNGASHGGAHGNITPIE
AVSPYQHKWTIKARCTSKGDIKTWHNKNGEGKLFSANFLDETSEIRATMFNEQCDQWYDV
LQEGSVYYISSPCKVQLAKKQFSNLPNDYELTFERDTQVEKADDEGVPQVKYSFTNLESL
QNVEKDTVTDVIGVLADVGEVNEIVSKTTSKPYSKRELTLVDDTGYNVRLTIWGKVAESF
DASPEAVVAFKGVKVSDFGGRSLSLLSSGSMNIDPDIDEAYKLKGWYQANGSTTQFASHA
NTMATVGATSGGRKDDTKTIQQVRDENLGMTDATDWFTLKATIVYIKQDNFAYAACQTTD
PQPCNKKVTEVDNGSWRCEKCEKNWDAPKYRYIMSVNVSDHTGQLWLSCFDDVGQAMLGM
PANELMVAKEEGDEKRVTDAFADANCKSFVFKCRCKMDNYQDQQRVRYQVQYANNIDFVR
ESKRLADIIKLYNSASDTLFV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcattcaatgccatcactcatggcgccctccgccaaattaccgagggcaac
cccgtggagaatcccatcctgcagtgcgtccagatcaagcccatggcccagggcgctggt
gggacagaacggtggcgggttgtcttcaacgacaccgtcaacttcattcagggcatgcta
tcctcgcaatcaaaccatctaatcaccgacggccatctcaagaaaggcagcgtatgccga
ctcacacagtaccaagcaaacttcgtcaaggacaagcacattctgatcatcatgaatctt
gatgtactgcacgagtatggcgagcaggacaaactgggttcaccggtggcgttggacgca
gcgaagcctgaagcacaagaggacgtgaagccacagccagggaacatcgcgggaaacaac
ttctatggtcagaagccacagcaggcgcaactacaacagcagcagcagcagcggtcactg
ccttcgcggacaaatggtgcttctcatggcggcgcacatggcaatatcacgcccatcgaa
gctgtctcgccatatcagcacaagtggacaatcaaggcaagatgcacatcaaaaggcgat
atcaagacatggcacaacaagaacggagaaggtaagctgtttagcgctaacttcttggac
gagactagcgagattcgagcaaccatgttcaacgagcaatgcgaccagtggtacgacgtg
ctgcaagagggttctgtatactacatctcgagcccatgcaaagtccagctggctaagaag
caattctcgaacctgccgaacgactacgaattgactttcgagcgggacacgcaggtagag
aaagccgatgatgaaggcgtgccgcaggtcaagtacagcttcacgaatctcgaatcgctc
caaaatgtcgagaaagacactgtgaccgacgtcattggtgtgcttgcagatgtcggtgag
gtcaatgagatcgtgtcgaaaactacatcgaagccctacagcaagcgagagcttactttg
gtggacgacactgggtacaatgtccgcctgactatctggggcaaggttgctgagtccttt
gatgcttctcccgaagctgttgtagcgttcaagggagtcaaggtcagcgattttggtggt
cgatcattgtccttgctgtccagcggaagcatgaacatcgatccagatatcgacgaggct
tacaagctgaaaggctggtaccaagccaacggcagcacaacacaattcgcatcgcatgcc
aacaccatggccactgttggtgccacgtctggaggtcgcaaggacgacaccaagaccatc
caacaggttcgtgacgagaacctgggtatgactgatgctacggactggttcacgctcaaa
gcgactatcgtctacatcaagcaagacaactttgcatatgctgcatgccagaccactgat
ccccaaccttgcaacaagaaagtgaccgaggtcgataatggcagctggcgatgcgagaaa
tgcgagaaaaactgggatgcgcccaagtaccgctacatcatgagcgtcaacgtcagcgat
cataccggacaactctggctcagctgtttcgacgacgtcggacaagctatgctgggaatg
cctgccaacgagctcatggtagcgaaggaggagggcgatgaaaagagagtgactgatgca
ttcgctgacgcgaactgcaagagctttgtgttcaagtgcaggtgtaagatggacaactac
caggaccaacagcgagttcgctaccaagtccagtacgccaacaacatcgacttcgtgcgc
gaatcaaagaggctggccgatatcatcaagctatacaacagtgcttcggacaccttgttt
gtatga
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integrated database retrieval system