Pseudocercospora fijiensis: MYCFIDRAFT_33776
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Entry
MYCFIDRAFT_33776 CDS
T03109
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MYCFIDRAFT_33776
Enzymes [BR:
pfj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
MYCFIDRAFT_33776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3_3
CBM-like
Motif
Other DBs
NCBI-GeneID:
19338942
NCBI-ProteinID:
XP_007931247
JGI:
33776
UniProt:
M3AKC4
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MRLTTCTSLLTILAGPALAKLNSHEATHRITFGNSRLNVSLDKTTGLIDILTLDNQNLLG
TKNGSTGVGPYLDCYCTPSGAYTPFRSQNNTHYTLLSGIDTTNTPWIGVIQFEIYAPTNQ
TFQQYFFLRGEETGLHTFTRLTYHNLTTPFLRNLQELRTLFRHNTKLWSHLSTTADVYSP
LPNYNPAAPALNTTAPHGQAMVQDATWLIPNASDPYVESTSSYYTKYTFSDSWRHHTVHG
LTSTPSAASDTFGAWFVMANKDTYFGGPTHSDLTVDGYVYDYIVSNHHGDQTPNITNGFE
RTFGPGFYYFNHGSNGESLQQLRSDAEKVYANAGKWSDFYDSIAPHVEGYIPSSGRGTWS
GHLTLPKKAQNAVAILSAAGIEIQDNVFDTTAHQYWADINQDGSVTIDRVKSGTYRLTIY
GSGIFGQFIHDNIIVKAGHTTKTSAIWQSESAGTELWRIGTPDWSSGEYLHGEHPDPTHP
QHLAERRIYFAVYDFVKDFPHGVSFHVGNDSIAKDLNYVHWSVFGGYGNSIRTEPYHENG
IVNNWKILFDASSQDLSDKTTATFTIQLAAARTAAGNTDIFNSSQRYSNLPYTVSVNGHH
LEPWIIPSCAVRSAVSCYHLSHKFVFHVSKLRVGRNEFLLSLPRNATGDDSALLAESVYV
QYDALRLEVK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgaccacatgtacctctctcttgacgatacttgctggcccagcgcttgcgaaa
ctgaattctcacgaagcaacacataggataacgtttggtaactcacggctgaatgtctct
ctagacaagaccactggcctgatcgacattctcactcttgacaatcaaaatctgctcggc
accaagaacggctcaacaggtgtgggcccatatctcgattgttactgtactccttccggc
gcctacactccctttcgttcacaaaacaatacccactacactctcctctcgggcatagat
accaccaatacgccatggattggggtcatacaattcgagatttatgcacccaccaaccaa
acatttcaacaatacttcttcctgagaggcgaagaaactggattgcatacattcactcgt
ctcacatatcataatttaacaacgcctttccttcgcaacctgcaagaattgagaacattg
ttcagacacaatacgaaattatggagccatttatctactactgccgacgtgtattcaccc
ttgccgaattataatcctgctgctccagctctcaataccacagcaccgcacgggcaagca
atggtacaagatgccacctggttgattcccaatgcttctgacccatacgtggaatcaaca
tcatcttactataccaagtacacattctcggactcttggagacatcatacagttcatggg
ttgacttcaactccatctgctgctagtgacacattcggtgcatggtttgtcatggcgaac
aaggatacatatttcggtggccctacgcacagtgaccttacagtcgacggttatgtctac
gattacattgtgtcaaatcaccatggcgatcagactccgaacatcacgaacggttttgaa
aggacttttgggcccggtttctactacttcaatcacggaagtaacggagagtcgttacag
caactgagaagtgatgctgaaaaagtatacgcgaatgctggaaaatggtcagacttctac
gatagcatcgcgccacacgtagaaggctacattccatcctcaggccgcgggacctggtca
ggtcaccttactctaccaaagaaagcgcaaaatgcggttgccattctgagtgctgcgggg
attgagatccaggacaacgtcttcgataccacggcacatcaatactgggccgacatcaat
caggatggatcagtaaccatagacagggtcaaatctggtacatatcgtcttaccatctac
ggaagcggcattttcggtcagtttatacatgataatatcatcgtaaaagctggacatacc
accaaaacttcagcaatctggcagtcagaaagcgcaggaacagagctctggagaattgga
acaccagattggagttcgggagagtacttgcacggcgaacatcccgatccaacacatcct
caacacctagccgaaagaagaatctacttcgccgtgtacgacttcgtcaaagacttccca
catggcgtctcctttcacgttggaaacgatagtatcgccaaagatctaaattatgttcat
tggtccgtcttcggtggctacgggaattccatccgcacagagccatatcatgagaatgga
atcgtgaacaactggaagattctgtttgatgcctcatcccaagacctttccgacaagact
accgcgactttcaccatccaactcgcagcagccaggaccgccgcgggaaatactgacatc
tttaattcgagtcaacggtactcaaatcttccatacactgtctctgtcaatggtcatcat
ttggagccttggatcataccctcctgtgcagtgagatctgccgtgagctgctatcactta
tcgcataaattcgtttttcacgtgtcgaagctcagagttgggaggaatgaatttctgttg
agtttgccgcggaatgctacaggtgatgacagtgcgttgttggcggagagtgtgtatgtg
cagtatgatgctttgaggttggaggtgaaatag
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