Pseudocercospora fijiensis: MYCFIDRAFT_37172
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Entry
MYCFIDRAFT_37172 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_37172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_37172
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_37172
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MYCFIDRAFT_37172
Spliceosome [BR:
pfj03041
]
Complex B
Other components
Prp19-related factors
MYCFIDRAFT_37172
Complex C
MYCFIDRAFT_37172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_8
Suf
TPR_2
Mad3_BUB1_I
TPR_19
TPR_10
TPR_7
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
19339169
NCBI-ProteinID:
XP_007930525
JGI:
37172
UniProt:
M3A1V3
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MLYLISHNDEIYENDILRSAGNVRAWLDYAHFKRQHGTLLEQSFVLERACNALPRSYKLW
KMYLELRATHLKGRNPAKWKAEYQKVNALFERALVLLNKMPRIWEMYLEFLMLQPLISFT
RRTFDRALRALPVTQHGRIWKLYRPFATSAGGETAVRVWRRYIQLHPEYIEDFIELLERE
GRYTEAVQRYIEILNNSKFKSREAKGPFQHWTEMLEILIDHARKVPNPVPLLDGRAIDVE
TIVRSGLERFPDQRGILWVGLARYYINLGNYERARDIFEQGITTVMTVRDFSVVFDTYAE
AEEALISIKLEESAARQQKGKVDEDADLDLDIRMMRFEQLMDRRPFLVNDVLLRQNPHNV
NEWRKRVALWGDNKQMVVQTYADAIAAIAPKKAVGRFHELWVNYAKFYEAGGDLTNARII
MEKAVKVPYKSVAELAECWTEWAELELRNENFDQAVNIMATATKAPKRSNVDYFDETLSP
QQRVHKSWKLWSFYVDLVESVSSLEETKKVYERIFELRIATPQTVVNYANLLEENEYYEE
SFKVYERGLDLFSYPVAFELWNLYLTKAVDHRISIERLRDLFEQAIEGCPPRFAKTLFLM
YGALEEERGLARHAMRIYERATRAVADEDRAEMFEFYITKSASNFGLTSTRSIYERAIAA
LPDREASSMCIKFAEMERRLGEIDRARAIYGHASQFCDPRVNAEFWRKWEAFEVQHGNED
TFKEMLRIKRSVQAQFNTDVNFIASQAVARQQAASGQTNGAAEDNDEVEMSGEKVDAMAA
LERQARAPAGFVAASSGPEGGNRPKVNQDQENRAVPNADEIDIDDDL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgctctacctcatctcgcacaatgacgagatctacgagaacgatattttgcgcagcgct
ggcaacgtgagggcttggctggactatgcacacttcaagcggcaacatggcacgttgctc
gagcaatcattcgtgctcgagcgcgcctgcaatgcgctgccccgaagctacaaattgtgg
aagatgtatttggagctgcgcgcaacccatttgaagggcaggaatccggccaaatggaag
gcggaataccagaaagtcaatgccctgttcgagagagccttggtgctgctcaacaaaatg
ccgcgcatttgggagatgtatctggagtttctcatgttacagccgctcatcagcttcacc
agacggaccttcgatcgtgcactacgagcgctgcccgtgacacagcatggtcgcatatgg
aagctctatagaccctttgcgaccagcgcaggtggagagacggcggtcagggtgtggagg
agatatatccagctgcatcccgagtacatcgaggacttcatagagctgttggaacgggaa
ggccgctacacagaggccgtgcagcgctatattgagatcctgaacaattcgaaattcaag
agcagggaagcaaaaggtccgtttcagcattggaccgaaatgctggagattttgatcgat
catgcccgaaaagtgccgaaccccgtaccattactagatggtcgcgcaatcgacgtcgag
accattgtgagatcaggccttgaacgctttccggaccagcgaggcatcctctgggtaggc
ctggccagatactacatcaacctgggcaattacgaacgcgcgcgagacatcttcgagcaa
ggcatcacaaccgtcatgacagtccgagatttcagtgttgtgttcgacacttacgccgaa
gcagaggaagccctgatctcaatcaaactcgaagaatctgccgcgcgacaacagaaaggc
aaggtggatgaagacgcagatcttgatctcgatattcgcatgatgcgctttgagcaactc
atggaccgccggcctttcctggtgaatgacgtgctcttgcgacaaaatcctcacaatgtc
aatgagtggcggaaacgtgttgctctatggggcgataacaagcagatggtggtgcaaact
tatgcagacgcgattgctgcaattgcaccaaagaaagccgtcggccgcttccacgagctc
tgggtcaactacgcaaaattttacgaagctggcggggatctcacgaacgcgcggatcatc
atggagaaagccgtcaaggtaccatacaaatcagttgcggagcttgcagaatgctggacc
gaatgggcggagctagagcttcggaatgagaatttcgaccaggccgtcaacattatggcg
accgcgaccaaggcaccaaagaggagcaacgtcgactactttgacgagacgctttcgccg
cagcagagagtgcataaatcttggaaactatggtctttctacgtcgatcttgtggagtct
gtatcctcgttagaagagacgaagaaggtttatgagcggatctttgaacttcgcatcgcc
acgccgcagacagtcgtcaactatgccaacctgctcgaagagaatgagtactacgaggaa
tcgttcaaagtctacgagcgcggcctcgacctcttctcgtatcctgtcgcctttgaactc
tggaatctctacctcaccaaagcagttgaccaccggatatccatcgaaagattacgcgac
ttgttcgagcaagcgattgaagggtgtccacctcgcttcgccaaaacactcttcctgatg
tacggcgcgctggaggaggagcgtggtcttgcacgacacgccatgcggatatatgaacgc
gcaacacgtgctgttgcggacgaagaccgcgccgagatgttcgagttctatatcactaag
agtgcttcgaacttcggactcacgtcaacgcgatcgatatacgaacgcgcaatcgctgct
ttaccagatagggaagcttcgtcaatgtgcataaagttcgcagaaatggagcgtcggctc
ggcgagatcgatcgcgcacgagccatttatggccatgcatcacaattctgtgatcctcgc
gttaacgctgaattctggcggaaatgggaagcgtttgaagtacagcacggcaacgaagac
actttcaaggaaatgctgcgaatcaagagatccgtgcaggcccaattcaacacggacgtc
aacttcattgcatcacaagcagtggcaagacagcaagctgccagtggtcagacaaatgga
gctgcagaagacaatgacgaagtagagatgtcaggcgagaaagtcgatgccatggctgct
cttgaaagacaagcaagagcgccggccggcttcgttgcagcttcgagcggtccagaaggt
ggtaatcggccaaaggtcaaccaggatcaggagaatcgtgctgttccaaacgctgatgag
attgatattgacgatgacctttag
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integrated database retrieval system
