Pseudocercospora fijiensis: MYCFIDRAFT_37991
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Entry
MYCFIDRAFT_37991 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_37991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_37991
Spliceosome [BR:
pfj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
MYCFIDRAFT_37991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
19339219
NCBI-ProteinID:
XP_007928821
JGI:
37991
UniProt:
M3A5K4
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MAKRPAETPLENSTTDSPASKRACVQHVADEDLPPPPPPPPPAPALSNGRANGDNGDHNA
EDVSEEEGDDDGADDAPSRQNAPALGYSDLYLDTISRTRLDFDFEKLCSITLSNINVYAC
LVCGKYFTGRGAKTPAYFHALEDGHHVYVNMQTKKVYVLPEGYEVKNKSLDDIKFVVDPT
FTPEEVKTLDKEPKPQWDLLGRKYIPGFVGLNNIKANDYLNVVVQALSHVVPLRNFLMLE
DLSLKSELIKRFSIMVRKIWNPKAFKSHVSPHELIQEVSLRSGKKFLLTQQADPIDFLSW
FLNNLHLALGGSKTKPKSSLIQKIFQGSLRVESQEITARADAGDRLRFEDTAIKSQQSPF
MILTLDLPPAPLFQDDVEKNIIPQVSLTTVLQKYNGITAQERMNTRMRYRLLHPLPPFLI
MHVKRFQPNKFLGSQRNPTIVTFNPRTLDVSPYVEPDPKIHPIGEPIVYELVANITYEGV
KVRDDSVEGEAERKVWKVQVKEGSDSNQWWEMQDLFVEKVNADLLATKESYIMIWKRQNK
SKAKS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgaccggcagagacaccactggagaacagtacgacagactcgcctgcatcg
aagagagcgtgcgtgcagcatgtcgccgacgaggacctgccaccacctccacctccacct
ccgcctgcgcccgcattgagcaacggccgcgccaatggggataatggcgaccacaatgct
gaggatgtgagcgaggaggaaggcgatgatgacggcgcggacgatgcgccctcaagacaa
aatgcgcccgcgcttggctactctgatttgtatctggacacaatttcgaggacccgccta
gacttcgacttcgaaaagctatgctccataaccctgtcaaacatcaacgtgtacgcgtgt
ctggtatgcggcaaatacttcacagggcgtggcgcaaagacgccagcatattttcatgca
ttggaggacggtcatcatgtctatgtcaacatgcagacgaagaaagtctacgtgctgccg
gaagggtacgaggtgaagaacaagagcttggacgacatcaaattcgtcgtcgatccaaca
ttcacaccagaagaggtcaagacgctcgacaaagagccaaaaccacaatgggatttgttg
ggaagaaaatacatcccaggcttcgtcggcctgaacaacatcaaagcaaacgactacctc
aatgtagtcgtccaagcattatcgcacgtggtcccgctacgcaacttcctcatgctcgaa
gacctttccttgaaatctgaactcataaaacgcttcagcatcatggttcgcaaaatctgg
aatcccaaagccttcaaatcacacgtctcaccccacgaactcatccaagaagtctccctc
cgctccggcaaaaaattcctcctcacacaacaagcagatccaatcgacttcctaagctgg
ttcctcaacaacctccacctggctttgggaggaagcaaaaccaaacccaaaagctccctg
atccaaaaaatcttccaaggctccctacgcgtcgaatcccaagaaatcaccgcccgagcc
gacgcaggtgaccgtctacgtttcgaagacacagcaataaaatcccaacaatctcctttc
atgatcctcaccctcgacctcccacccgccccgctcttccaagacgatgtggaaaagaac
atcatccctcaagtctccctcaccaccgtcctacaaaagtacaacggcatcacagcacaa
gaacgcatgaatacccgaatgcgataccgactccttcatcctctcccaccattcctcatc
atgcatgtaaaacgtttccaaccgaataaattcctcggctcacaacggaacccaacgatc
gtgactttcaacccgagaacactagacgtatcgccttacgtggaacccgaccccaaaatc
catccgatcggcgaacctatcgtctacgaattagtcgcgaacatcacgtacgaaggcgtc
aaagttcgagacgattcggtagaaggtgaagcggagaggaaagtctggaaagtgcaagtc
aaggaagggagtgatagtaatcaatggtgggaaatgcaggatttgttcgtggagaaggtg
aacgcggatcttcttgcgacgaaagagagttatatcatgatttggaagaggcagaataag
agtaaggcgaagtcatga
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