Pseudocercospora fijiensis: MYCFIDRAFT_39242
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Entry
MYCFIDRAFT_39242 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_39242
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYCFIDRAFT_39242
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
Helicases
MYCFIDRAFT_39242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19339281
NCBI-ProteinID:
XP_007925796
JGI:
39242
UniProt:
M2ZWL7
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MDLRRLLARGQKSNRSPSAKTATTTTPSSGQNASPQLFPSKGEGSVSTVLTTSKKRKRGK
GEPPETVELNFFGNHSRNDARGTDSQAGAIGGKHVEKQEAHPPHLPSKKPAMISLDERKR
ILKEHKVKVTWLNAAPCSQKAPERGTPKKKDKSERAEKISIFPQPLCSFAELEAQYDISS
RISANIEEQGYTMPTEVQLGAIPLLLEKPKNVLSSADRPLAAAHSSSLDLLTVAPTGSGK
TLAFAITLLHSIQRLRRERPGDRRSSKGIILAPTKELAGQIVNEIRKLARNTGIKVTQVR
KGMRLGSAMTTDSDGDSDEDEDHSEGREVSVKSDVLVSTPGILASIVSASDAKLPDVQYL
VLDEADVLLDPLFREQTLGIWHALPHVELRVSLWSATMGSNIEELAISVIGERKAKLGIV
QDDSPLIRLVVGLKDSAVPNVEHRLIYAASEQGKLMGLRQLLHPTTPSSEAGPPLLLPFL
VFTQTIERAVALHSELLYDIPAEAGGISRIAVLHSDLSDSARDTVMTKFRKGEIWVLITT
DLLSRGVDFRGVNGVVNYDIPTSSAAYVHRVGRTGRAGREGGVAVTLYTKEDVPYIKHVA
NAVAAAQKQKAEAGASQEGGVQQWLLDTLPSLTKKAKHDLRKYGVESRTARGASKDPKAA
RKAKISTKAGYVRREENKRKGAIQGSRNRSREAAPEDSDSDFGGFD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatttacgtaggcttttggcgcgtggacagaaatcgaacaggagcccgagcgcaaag
actgcaacaacaacgacaccgtccagcggtcaaaatgcctcgccacaactatttcccagc
aagggcgaaggcagcgtctcgactgtgttgacgacttcaaaaaagcgcaaacgcgggaaa
ggcgagccaccagagaccgtagagctcaatttcttcggaaatcattcacggaatgatgcg
cgcggtaccgattctcaggcaggtgccatcggtggaaaacatgtcgaaaagcaagaggcg
catccacctcatctaccgtcgaagaagcctgccatgatctctcttgatgagcgcaagcgt
atactgaaagagcacaaagtgaaggtcacatggctcaatgccgcgccatgctcacagaag
gcaccagagcgagggacgcccaagaagaaggataagagcgaaagggcagagaaaatttcc
attttcccacagccattgtgctccttcgccgaattggaggcccaatatgatatttccagt
agaatttcagccaacattgaggaacaagggtacacaatgcccaccgaagtacagctaggt
gcaatcccgctcttactggaaaagcccaaaaacgttctctcttctgcagaccgaccgctt
gccgctgctcattcttccagcttagatctattgacagttgcgccgaccgggagtggcaaa
acgctggcgttcgcgatcacgctgctgcacagtattcaaaggcttagacgagaacgacca
ggcgatcggaggagtagcaagggaattattctggcgccaacaaaagaactcgctggtcaa
atcgtgaacgagattcgaaaattggctcgcaatacaggcataaaagtcacgcaggtgcgg
aagggaatgcgattggggtctgccatgacgaccgacagcgatggggattcggacgaagac
gaagatcacagtgagggtcgcgaggtgtcggtgaaatcggatgtcctggtctcgactcca
ggaatcctggcatcaatcgtgtctgcgagcgatgcgaaactaccagatgttcaatacctt
gttctggatgaagcagatgtactccttgacccgctcttccgcgagcagacgctcggcatc
tggcacgctttgcctcatgtggaattgcgggttagtttatggtcagcaacaatgggtagt
aacatcgaggagttggcaatatcggtgattggtgagagaaaagcaaagctgggcatagtg
caagacgatagccctctcattcgtcttgtggtgggcttgaaagactctgcggtccctaat
gtcgagcacaggctgatatatgctgcttcagaacaaggaaagttgatgggactgcgacag
ctgttgcatccaacaacgccctcttctgaagctggtcctccgttattattgcccttcctg
gtctttacgcaaaccatcgaacgggcggtcgcgctacattctgagcttctctacgatatc
cctgctgaagctggcggcattagtcggattgcagtgctgcattctgacctctcagacagt
gctcgcgacacggtcatgactaaattccgcaaaggcgagatatgggtgctcatcacgacc
gacctgttatcgcgaggcgtggatttccgaggtgtgaatggagtggtcaattatgatata
ccgacctcaagcgctgcatacgtacaccgggtaggacgaacagggcgcgcaggccgagaa
ggcggcgtggctgttacgctgtacaccaaggaagatgttccatacataaagcacgttgcc
aatgctgtcgctgctgcgcagaagcaaaaagcggaagcgggagctagccaggagggcggt
gtgcagcaatggctcttggatacgttaccaagtctgacgaagaaagccaaacacgatctg
aggaaatatggtgttgaatctcgcaccgcacgtggcgccagtaaagaccccaaagccgcg
aggaaagccaagatcagcacaaaggcgggatacgtgcgccgagaagagaacaagagaaaa
ggggccattcaaggcagccgaaaccgttctcgggaagcagcgcctgaagatagtgattcg
gactttggtggatttgattga
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integrated database retrieval system
