Pseudocercospora fijiensis: MYCFIDRAFT_40108
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Entry
MYCFIDRAFT_40108 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCFIDRAFT_40108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_40108
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCFIDRAFT_40108
mRNA degradation factors
3'-5' decay
Pan complex
MYCFIDRAFT_40108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
PK_Tyr_Ser-Thr
Pkinase
Motif
Other DBs
NCBI-GeneID:
19339328
NCBI-ProteinID:
XP_007922429
JGI:
40108
UniProt:
M3ANX7
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MCSSKKSLSVESPAFTPKTTNAVPVKNIGISPKAVGAPTFTPRGSGMSSPCSPLASQNHI
NPYVQQSASVAAQPYYQDASSFKHPLNYHLYSAIGPRRENLMAYQRSTSDFFIPDNLRED
LQRKADAALQTFANSTLPQHVEYFHSLVALDTNHSKGQSAFGYPSWTYKATSSKDGHTYV
LRRIEGFRLTSEASIRTVTSWKRLSNSSMVTVHDAFTGRWFGDSSLVVVTDFHPNSQTLA
EKHLMPGRNAGRAGSQIVPENDLWGYIIQLASALKTIHSANLAAQSVMASKVLLTSKNRV
RLNGCGVFDIIKYDQQQSVRESQRKDLQDLGRLILCIAARSPSAHQNTHKSLELVSKSYS
ERLRICLAWLVAPPPLPQDVQTQPSAKAAEYNVEALLTNIADKVVSCFDSALHYEDAVTT
NLMGELENGRLVRLLTKLNVILERPDTSPSAAWSETGERYYLKLFRDFVFHQVDHEGRPV
LDLGHIITCLNKLDAGIDEKIQLISRDEQSVFIVSYKEVKRGFEAAWSEITKHADPQRR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagttcgaaaaagtccttaagcgtcgagtcaccagctttcactccaaagacaacg
aacgcggtgcccgtcaaaaatattggtatatcaccaaaggcagtgggtgcaccgacgttc
actccgcgtggatcaggtatgtcgtcgccttgttcgccgttagcttctcagaaccacata
aatccatatgtgcagcaatcagcttcggtggcagctcagccttactaccaagatgcgtcc
agcttcaaacatccactcaattaccacctgtattctgccattggccctcggcgagaaaat
cttatggcataccaacgcagtacaagcgatttctttatacccgataacctgcgagaagac
ttgcaacgaaaggcagatgcagcgctgcagacgtttgctaacagcacgcttccacaacac
gttgaatactttcattcgttggttgccctagacacaaaccattccaaggggcagtctgca
tttgggtatcctagctggacttacaaggccacatccagcaaagatgggcacacatatgtc
ctcaggcgcatagaaggtttccgtctcacaagtgaggcatccatccgaaccgtaacttcc
tggaagaggctgagcaattccagtatggtcacggtgcatgacgctttcacaggacgctgg
tttggcgatagttctttggtcgtggtcaccgatttccatcccaactctcagacactcgct
gagaagcatctgatgccagggaggaacgctggtagagccggttcccagattgtgccggag
aatgacttgtggggatacattatacagctagcgagtgcgctgaaaaccatccattctgcc
aatctcgctgcgcagagcgtcatggcatcgaaagtacttctgacatcgaaaaaccgggtg
cggctcaatggatgtggcgtgttcgacatcatcaagtacgatcagcagcaatctgttcga
gagtcgcagagaaaagatctgcaggatctcggtcggctgatcctctgcatcgccgcgcgc
agtccatctgcacaccagaacacgcataagtcgctagaactggtcagcaaatcttatagc
gaacgactacgcatctgccttgcatggctggtggctcccccacccctgccgcaagatgtc
caaacacagccgtctgcaaaagctgcagaatacaatgtcgaggccttactcaccaacatt
gccgacaaggtggtatcatgctttgacagcgcattgcattacgaagatgcagttacaaca
aatctaatgggcgagcttgaaaatggacgcttggtccgtctgctcacgaagctcaacgtc
atcttggaaagaccagacactagcccttcagcagcttggtcagaaactggagagcgctac
tacttgaagctgttccgcgactttgttttccaccaagtcgatcatgagggcagaccggtc
ttggaccttggacatatcatcacatgtctcaacaaactcgatgctggtattgatgagaaa
atccaattgattagtcgcgatgagcaaagtgtcttcatcgtaagctacaaagaggtcaag
cgaggatttgaagctgcatggtcagagatcacaaagcacgctgatccccaacggcggtag
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