Pseudocercospora fijiensis: MYCFIDRAFT_45277
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Entry
MYCFIDRAFT_45277 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
pfj
Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_45277
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
Other 90S particles
MYCFIDRAFT_45277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
Spt6_S1
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
Suf
TPR_19
TPR_16
TPR_8
TPR_7
DUF7715
Motif
Other DBs
NCBI-GeneID:
19339634
NCBI-ProteinID:
XP_007922512
JGI:
45277
UniProt:
M3AP35
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MSAVKRKAVTDERPSKKAKSSEAKDEQSKEKRPRKSVDNSGEKRVLKSILQTEERSFPRG
GAGPLTALENKQIQAQAERDAKKELETGQQQSLDDEDLFDDAADESRSKKKRKSDAKKGK
SEGTITRIQGLTYKNLTVGSVVLGRITAITDRDIALALPNNMTGYAKITSISPKVNSKLE
QIMLAEEEDAEEHGDVDLKELFHIGQWLRAAVTATATEPEEGKDKGKGQSKPKKHIELSI
EPAATNGRLSADSVVTHSTIQASVRSVEDHGLVMDVGLIEEHATGFIAKKALGAAWELSK
AKEGQVMLCLVTDKVGGDGRKVLKLSPDFNKLNGSQSNAPVVSDAPTVDAFLPGTLANVL
VTEVTPLGIAGKIMGLLDVTADTVHSNAVGVEDMSKKFKIGSKLKARITYALPQVDESTK
VGVSLLDHVLALTPAPTKLPGNATFKLKAQAKEIEQALPLSKILDEAKVTRVLSQQGVFL
AVSRKEGRGERTITAFAHISQLSDQHIDTLSSTSGSYKPGTVHKARVLSYNPIDDIYRVS
LKQSVLDQAFLRLEDLKVGQTVKGSVDKLIYGSKSGVTGILVKLSDNVNGLVPEMHLSDT
QLRFPESKFRAGSEVKARVLSVHPEERQIRLTLKKSLLEDDSTSLWKDYHDLEPGMTSRG
TIIALHDNGAVIQFYGAVRAWLPVAEMSESWIESPSEFYRLGQTVNVRIVSVSPEAERMK
VTCKDGGDFTQEQSDAWDRIHGGELVSACVTEKTADSILLDLDHGLKGIIRLGHLVDNSE
AKAQSAMKRIRVGEKLKNLLVLDKQERSRTVVLSNKPSMVKDAAKPGKLIKSFSDARPGI
KFHGFVRNITQDSVYAEFPNGVVGLITKSLLLPEMSNQPSFGLRRDQTLTVWVTDVDLTR
QRFLLTMREPGQSAQTETSENRNATESDVKNAVDPAISSMADFALGTVVKARIASVKATQ
INVRLADNVQGRVDVSEVFDSWDDITNKAAPLQNDKLKQNDTIDVKILGIHDARSHRFLP
ISHRGGKVPVFELSAKPSRVRGGDESLLAMDSVKQGASYLAFVNNHSDNCVWANLSPNVR
GRVSLMDLSDDVGQLQNVENRFRVGCALQVKVKSVDTTSNKLDLTAKENLTRKELSLGMV
VPARVTKISEHGITVMIADDIVCHVPLVELSDDYDQTNPGQHRKNEVVRVCVVGLSLPDK
RVFVSLRPSKVLSSSLPVKDAHITEASQLKPGAIVRGFVKRVAEKGIFVSLGSRVDALVH
ISDLSDQFVKDWPSIYEVNQLVQGRVVTVDAASGQVQLSLKRSHVDNDYQPPMTIHDLKQ
GMTVTGKVRKVEDFGAFVDIDNTQPRLSGLCHRSEVAAKRIEDVRKHYSSGDVVKAKVLS
VDPDSRKISLGLKASYFSNEAEISEDESGDESEDVDMEDGVEVEEESDAEGGVEVDLSEL
QEADSDADEAADAMEVDADIESTVKGGLKTAGFQWGEPDVGRDTAADESEPETTSTKKRK
RKPEIKEDRTGDLDKFGPRSDSDFERHLLSQPNNSGLWIQYMAFQLELSEVQKARDIAER
ALRTIHIRETEEKMHIWVAWLNMEIEYGDDERVEDVFKRACEVQDPLEMHERLANIYISA
GRLDQADAVFEKIVANKNFRASPDVWYNYATFLMNNLGAADRARALQSRALKSISPKENR
KLVAKFAALEFHSENGTAERGRSVFEAILSDSPHWSSGWDQWVDLERSREAIDKTRALYE
RISQQKMKKRRAKFVFKKWLEYEEKEGKEKDVERVKALASEYVRKLAARGEDEDE
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtcaagagaaaggccgtcacagacgagcgccctagcaagaaagccaaatcg
tccgaggcgaaagacgagcaaagcaaagagaagaggcctcggaaatccgtcgacaatagc
ggtgagaagagggtgctcaaatctatactacagactgaagagcgcagctttccacgcggt
ggcgcaggtccccttactgccttggaaaataaacagattcaagctcaggctgagcgagat
gccaagaaagaattggagactggtcagcagcagtcgctcgacgatgaggatctgttcgat
gatgccgcagacgaatcccgcagcaagaagaagaggaagagcgatgctaagaagggcaag
agtgaaggcaccatcacaaggatacaaggtttaacctacaaaaacctcactgtgggcagc
gtcgtacttggccggatcacagcaatcactgaccgcgacatcgcgcttgccttgcccaac
aacatgaccggatatgctaaaattacctcgatctcgccaaaagtcaactccaaactcgaa
cagatcatgctggcggaggaggaggatgctgaagagcacggcgacgttgacctgaaagag
ctattccacataggacagtggctcagagctgccgtgactgccactgctaccgaaccagaa
gaaggcaaggacaagggaaagggacagagcaagcccaagaaacacatcgaactgtcaatt
gagcctgcggctacaaacggtcgtctttctgcggacagcgttgtgacgcatagcacgatt
caagcttccgtacgcagtgtcgaggatcatggcctggttatggatgttggtctcattgag
gagcatgccaccggtttcatcgccaagaaggcgctaggagctgcctgggaattaagcaaa
gcgaaggagggtcaagtcatgctttgtcttgtcaccgacaaagttggcggtgacgggcga
aaagttctgaaactgtcaccagatttcaacaagctcaatggcagtcaatcgaatgctccg
gtcgtcagcgatgctcctacggtcgacgcctttctaccgggtacactcgccaatgtcctt
gtgacagaagtcacgccactggggatcgctggcaagatcatgggcctactcgatgtcact
gctgacacggttcactccaatgctgttggcgtcgaggatatgagcaagaaattcaagatc
ggaagcaaattaaaagcgcgaattacttatgcgcttcctcaagtcgatgagtctacaaag
gtcggggtatcattgctcgatcacgttctggcacttacaccagctccgaccaagctgcca
ggaaacgcgacgttcaaattgaaggcacaagcaaaagagatagaacaagcgttgccgctc
tcgaaaattcttgacgaagcaaaggtgaccagagtcctctcccagcagggagtgttcctc
gcggtctcgagaaaggaaggccgcggagagcggaccataacggcattcgcacatatctcc
cagctttcggaccagcacattgatacattgtcatcaacgtctggatcttacaagccgggc
actgtgcacaaggcacgggtgctgtcttacaaccccatcgacgacatctaccgtgtctcc
ttgaagcagtcagtgcttgaccaagcttttctgcgacttgaagatttgaaagtgggccag
actgtcaagggctctgtcgacaagctgatctacggaagtaagagtggagttactggcatt
ttggtgaagctgagcgacaacgtcaacggcctagtcccggagatgcatctcagtgataca
caacttcgttttcccgagagcaaattcagagcaggctctgaagtaaaggcgcgtgtgctg
tcggtccacccggaggagcgacagattcgactcactctcaagaaatctttgcttgaagat
gacagcacctctctctggaaagactatcatgatctcgaacccggcatgacttctcgaggg
acgatcatagctctgcacgacaacggtgctgtcattcaattctacggcgctgtccgagct
tggttgccggtcgccgagatgagcgagtcgtggattgaaagtccgagcgagttttaccgc
cttggtcagaccgtcaatgtgaggattgtgtcagtctcgcctgaggctgagcgaatgaaa
gtcacttgcaaggatggcggagacttcacccaagaacaaagcgacgcgtgggatagaatc
cacggcggtgaacttgtgagcgcttgcgtcaccgaaaagacagccgactccattctgctt
gatcttgatcacggtctcaaagggattatccggcttggccacctagtcgacaactcggag
gccaaggcgcagagcgccatgaaacggatccgtgtaggagagaagctgaagaatctcttg
gtacttgacaagcaggagagaagccgtacggtcgtgcttagcaataagccttccatggtg
aaggacgctgccaagcctggtaagctcatcaaaagcttcagtgatgctcggccaggaatt
aaattccatggcttcgtgcgaaacatcacacaggacagcgtgtatgctgaatttcctaat
ggcgtggttggtctcatcacgaagagcctgcttctgcctgaaatgagcaatcaaccatca
ttcggactccgaagggaccagacattgaccgtctgggtgactgatgttgatcttacgcgg
cagcgatttctgctcacaatgcgcgagccagggcagtcggctcagaccgagacatctgag
aaccgtaatgcaacggagagcgacgtcaaaaatgccgtcgaccctgcgatctcttcgatg
gcagattttgcgcttggaacagtcgttaaggctcgcattgcttccgtgaaagccacgcag
atcaatgttcggcttgcagacaatgtgcagggccgtgtggatgtcagtgaagtattcgac
agttgggacgatattacgaataaagcggctcccttgcagaacgataagctgaagcagaac
gacacgatcgacgtcaagatcctgggtatccacgatgcacgcagtcatcgcttccttcct
atcagccaccgtgggggtaaggtgccggttttcgagctctcagccaagccgtccagagtt
cgaggtggcgatgagtctctcctggcgatggactctgtcaagcagggtgcttcctacctt
gcatttgtcaacaatcacagcgataattgcgtgtgggcgaacctgtcacctaacgtccgc
ggtcgtgtgtcgttgatggacttgtcagatgacgttggtcaattacaaaacgttgaaaat
cgctttcgtgttgggtgcgctctccaggtcaaggtgaagtcagtcgatactacaagcaac
aagctcgacctgaccgcgaaagaaaatttgacacggaaagagctttccctgggcatggtc
gtgccagcgcgcgtcaccaaaatatccgagcatggcattaccgttatgatcgctgatgat
atcgtctgtcacgtgccgctcgtggaactcagcgatgattatgaccaaacaaaccccggg
cagcatcgcaagaacgaggttgttcgtgtctgtgttgtaggccttagcctgccagacaag
cgcgtcttcgtcagcttgcgcccttccaaagtgttgagctcaagcctgccggtgaaggat
gcacatatcacagaagcttctcagctcaagcctggagcgatcgtccgcggtttcgtcaaa
cgagtcgccgagaaaggaatttttgtgtctcttggctctcgcgtcgacgctctggttcat
atctctgacttgagtgaccagtttgtgaaggactggcctagcatctacgaggttaatcag
cttgttcagggcagagtggtgactgttgatgccgccagcggacaggtccagctaagccta
aagagatcgcacgtggacaatgattatcagccgccgatgaccattcatgatctaaagcaa
ggcatgacagtcactgggaaagtccggaaggtcgaggactttggcgcattcgtggacatc
gataatacacagccccggctttctggactttgtcacagaagcgaggttgctgcgaaacga
attgaggacgtccggaaacactatagctccggagatgtcgtgaaagcgaaggtgctcagc
gtggacccggacagcagaaagatcagtcttgggttgaaggccagctatttcagcaatgaa
gccgagatcagcgaagacgaaagtggagatgagagtgaggacgttgacatggaggatggc
gtagaggttgaagaagagtctgatgccgagggtggcgtcgaagttgatctctctgaattg
caagaagcggacagtgacgctgatgaggccgcggatgccatggaagtcgacgccgatatc
gaatcgactgtcaagggcggtctgaagacagctggctttcaatggggcgaacctgatgtc
ggcagggacacggctgcggacgaatctgaacctgagacgacttcgacaaagaagcgcaag
cgcaagcctgagatcaaagaggatcgcaccggtgatcttgacaagtttggcccacgcagt
gatagcgacttcgagcgccacctcctgagccagcccaacaactctggtttgtggatacaa
tatatggctttccaactggagctctccgaggtacagaaggctcgtgatatcgccgagcga
gctttacgcacgatccatattcgagaaactgaagagaaaatgcacatctgggtcgcttgg
ctaaacatggaaattgagtacggcgatgacgagcgcgtcgaagacgtattcaagcgcgcc
tgcgaagtccaagatccgcttgaaatgcacgaacgtctggcaaacatttacatcagtgct
ggacgtcttgatcaggcggacgccgtcttcgagaagattgtggccaacaaaaacttccgc
gcaagtcctgatgtctggtacaactacgcaacgttcctcatgaacaaccttggagctgca
gatcgcgcgagagcgctgcaatcaagagcgctgaaatcgatctcgccaaaggagaatcgc
aagctcgtggcgaagttcgcggcgcttgaatttcactctgaaaatggtaccgctgaacgt
ggtcgaagcgtctttgaggcaattctgtcggattcaccacactggagctctggatgggat
caatgggttgatcttgaacgctcacgagaggcgatcgacaagaccagggcgctttatgaa
cgcatcagccagcaaaagatgaagaaaaggcgagcaaaattcgtcttcaagaaatggctg
gaatatgaagagaaagaaggcaaggaaaaggacgtggaaagagtcaaggctcttgctagc
gaatacgtaaggaaattggcagcaagaggtgaagatgaggatgagtga
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integrated database retrieval system