Pseudocercospora fijiensis: MYCFIDRAFT_49240
Help
Entry
MYCFIDRAFT_49240 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MYCFIDRAFT_49240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_49240
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MYCFIDRAFT_49240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
19339859
NCBI-ProteinID:
XP_007927987
JGI:
49240
UniProt:
M3AVD6
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MSSRPELKVDDEAGFVKTFYQLEKEKPKDSIRIFDRGDFLSAHGDDAEFIANVQYKTTSV
LKTLGRNPGLPSVTMTVTVFRTFLRDAIFRLGRRIEVLESSGRSQWKVTKQASPGNLQDI
EDDLGGHVESAPIILAVKVSAKPNDARNVGVCFADASVRELGVSEFVDNDIYSNFEALII
QLGVKECLIQTDLSKKDAELHKLKTIADNCNCAVSERPIGDFSARDTEQDLARLLRDEKA
TAALPQTDLKLAMASAAALMKYLGIMSDPSNFGNYQLYQHDLTQYMKLDSSALKALNLMP
GPRHGSKTMNLFGLLNHCKTPVGSRLLAQWLKQPLMSLEEIEKRQQLVEAFVNDTELRQT
LQEEHLRSIPDLYRLAKKFQRKKANLEDVVRAYQVAIRIPDFIGTFEGVMDEAYKNALDE
TYTNKLRSYSDSLAKLQEMVETTVDLEALDHHEFIIKPEFDDTLRVIRKKLDTLRYNIDK
EHERVGSDLGLDTEKKLLLENHRVHGWCLRLTRTEASVIRGKKHYPEIATQKNGTYFTTR
KLQEMRREFDQLSENYNRTQSGLVNEVVNVAASYCPVIEQLAGVLAHLDVIVSFAHVSVH
APAAYVRPKIHPRGTGSTNLKEARHPCLEMQDDVQFITNDVTLARESSEFLIITGPNMGG
KSTYIRQIGVIALMAQIGCFVPCTEAELTLFDCILARVGASDSQLKGVSTFMAEMLETSN
ILKTATKESLVIIDELGRGTSTYDGFGLAWAISEHIIKEIGAFAMFATHFHELTALVDTY
PQVQNLHVVAHISGEAEDTDMTNNGTSTRRREVTLLYKVIPGISDQSFGIHVAELVRFPQ
KVVNMAKRKADELEDFSKKDDKEEKEELNGKAAKEEVEEGSRLLKEVLYKWKEEAEGLSK
EEQVQKMRELVKGNEKLLANPFFQSVKAL
NT seq
2788 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccggccggagctcaaggtcgacgatgaggctggcttcgtcaagaccttctat
cagctcgagaaggaaaagcccaaagattccattcgcatcttcgaccgcggcgactttctc
tcagcccacggcgacgatgctgaattcatcgccaatgtccagtacaagaccacttccgtc
ttgaagaccttgggcagaaatcctgggcttccatcagtgacaatgaccgtcactgtcttc
cgcacattcctccgggacgctatcttccgacttggaagaaggatcgaagttctggaaagc
tccggccggagtcagtggaaagtcaccaagcaagcctcaccaggcaatctccaggacatc
gaggatgatctgggcggccacgtcgagtcggcacctatcatcctggccgtcaaggtgtca
gcaaagcctaacgacgcccggaatgttggcgtctgcttcgctgatgccagtgtgcgagaa
cttggtgtgagcgaatttgtcgacaatgacatatattccaactttgaggcactcatcatt
cagctcggtgtcaaagaatgtctcattcaaacagatctctccaagaaagatgcagaactg
cacaagctgaagaccatcgccgacaactgcaattgtgccgtctctgagagaccaatcgga
gacttcagtgccagggacacagaacaggacctggcgaggctactacgcgacgagaaagca
actgctgccctgccgcagaccgacctaaagctcgcaatggcatctgcggccgctttgatg
aagtatcttggcatcatgtctgatccgagcaactttggcaattaccagctctaccagcac
gacttgacccaatacatgaaactcgactcctcagctttgaaggctctgaacctaatgcct
gggccgaggcacgggtccaagacgatgaatctgttcggtctcctcaaccactgcaagaca
cccgtcggaagtcggctcctggcacaatggctgaagcaacctttgatgagcctagaggaa
attgagaaacgtcagcagcttgtcgaagcgttcgttaacgacaccgaactcagacagaca
ttgcaagaggaacatctacgatccatacctgacttatatcgcttggccaagaaattccag
cgcaagaaggcaaatcttgaagatgtggtgagagcatatcaagtcgcgattcgaatacca
gatttcatcggcactttcgaaggagtcatggatgaagcatacaagaacgcattggacgag
acttatacgaacaagcttcgaagctactcggatagcttggccaagcttcaagaaatggtc
gaaacaactgtagacctggaagcgctggaccatcacgagttcatcatcaagccagagttc
gacgacactcttcgtgtcatccgcaagaagctggacactctccgatacaacatagataag
gaacatgagcgtgttggcagcgaccttggactcgacacagaaaagaagctgctgctcgag
aaccacagagttcatggatggtgcctacgtcttacacggaccgaagccagcgtaatccga
ggcaagaagcactaccccgaaattgccacgcagaagaatggcacttacttcaccacacgt
aagctccaagagatgcgacgcgaattcgaccagctctcggagaactacaacaggactcaa
tctggtctcgtcaacgaagtcgtcaacgttgcggcatcatactgccccgttattgagcaa
cttgccggcgtactggcacacctagacgtaatcgttagtttcgctcacgtctccgtccac
gctccagcggcatatgttagacctaagattcaccctcgtggcacaggcagcacaaacctg
aaagaagcccgacatccgtgcctggaaatgcaagacgacgtccaattcatcaccaacgac
gtcaccctcgcccgagaatccagcgaattcctcatcatcacaggtccaaacatgggcgga
aaatccacatacatccggcaaatcggcgtcatcgccctcatggcccaaatcggctgtttc
gtcccttgcacagaagcagaactcaccctcttcgactgcatcctcgcccgagtaggagca
agcgacagccaactgaaaggcgtctccacattcatggccgaaatgctcgaaacctccaac
atcctcaaaaccgcaaccaaagaatctctcgtaatcatcgacgaactcggacgaggaact
tccacttacgacggctttggtctcgcatgggcaatttccgaacacataatcaaagaaatc
ggagctttcgccatgttcgccacacatttccacgaattgactgctttggtcgatacgtac
ccccaagtccagaacttgcacgtcgtcgcacatatcagtggcgaggctgaagacacggac
atgacaaacaacggcacatccacccgccgccgcgaagtaaccctcctctataaagtcatc
ccaggaatctccgatcaatccttcggaatccacgtcgccgaactcgtccgcttcccacaa
aaagtcgtaaacatggcgaaacggaaagccgatgaactcgaagacttctccaagaaagac
gacaaggaggagaaagaggagttgaatggcaaagctgcgaaagaggaagttgaagaaggg
agtaggttgttgaaagaggttttgtacaagtggaaggaagaggcggaagggttgagtaag
gaggaacaagtgcagaaaatgcgggaacttgtgaaggggaatgagaagttgttggcgaat
cccttctttcagagtgtgaaggcgctgt
DBGET
integrated database retrieval system