Pseudocercospora fijiensis: MYCFIDRAFT_55523 Help Entry MYCFIDRAFT_55523  CDS       T03109                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pfj  Pseudocercospora fijiensis Brite KEGG Orthology (KO) [BR:pfj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pfj03021]     MYCFIDRAFT_55523 Enzymes [BR:pfj01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      MYCFIDRAFT_55523     5.6.2.5  RNA 5'-3' helicase      MYCFIDRAFT_55523 Transcription machinery [BR:pfj03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      MYCFIDRAFT_55523 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 UvrD-helicase AAA_30 DEAD SMC_N Viral_helicase1 AAA_23 nSTAND3 AAA_22 ResIII Motif Other DBs NCBI-GeneID:  19340223 NCBI-ProteinID:  XP_007920162 JGI:  55523 UniProt:  N1Q856 LinkDB All DBs Position Unknown AA seq 1999 aa AA seqDB search MAGGERLVGLLETLANLDAGVHWFCPRQKDDDGGHFFDEDLGDAASESSQEKAERMEKIQ EARGRQDDAMETCILLAFNGPDAEPYQAKLKHCLSKQLTRCDICVREFHRARRRLRNQLE SDYSPEDVLLFMQTFDAMNSERITAGLDDMTEALLDMPPEERKITAVGDVGMYAMFEALH CIPFLRHEELLAKHFDQPFRLVQTKKKVNLPNYAPGMIAFMYSANEERRNWAERNVNRIK RPLFKEEFEYAVKPFLEPAMAKVHVISLDLVYLPQYWRATKLIVDSLDKTAMDEGLRALD TNFFVMALDHFQIDAPHFTDLLASVQKLIQVGAGDFWEAVGSATPQNVIEAICRAPGFET LLTTRDEREPLRLEEKMGWVDAIIHSIKPANLVPPLRTLLNQLLHKYQEERYSNYASRVT WEKGLTALLDSINIITNAVDGGPVYVHLVEAVAKDHISPILQELLGIEKKDEPAISKTEL LDLDIVERILAMEVKGLARDRRYIEKNHDLDHEIGVSSLNLWKMTMRAVKPGNAYLPTAI LFGIKRLVQLDALPPVDLKKAPKPAPNWNNALSRAQNHVITDFLGRVDHFTPEQLMDLLM DQKASQGFMTLLFSANDEIHQSTLSALKALSGQDNRRDSLFHVIELMLGTMLSAVGESLG LIQEARIFGPCEVSLKLCRDILDCLCNTQDGILRKESRWTESDLRALKVFWFRVWSITEM IFEMTEHWSGTGLDKHKMQEFCRDTMDFAEYTFDQYAVLAGVIDSSGAPGDSKSLLNCTN RAFRSVVKWLRLRDDYLITKAVSLTSKMLIRLQDVGIRVGEEAEDYVERIVIETGSQKIK TKLAAHHKAELQRALERHIGDSLSGIIETSQAKKKQSSLDRFAFAGRAGSESGASTPTST TASKAKGTLDIGKWSKAVEQKKGEPKEPKFNNLLKQQQEMKQKQQLQDAFVANRRKAQAE DKARREAALAKAKSSGAGTGVLGVGNYGADHSVKGQTVMVDSDDDESDSEDDLDNDLFGP PGKPKKQVRPELDLSNAQGLKPEVKNRATRINRQNRSHKDMRARLAPDLGPLHRIILGWD VFYSGDYPPGHNSHEFSTVENSFRDPITYQNTFEPLLILEAWQGMAKEREESSSKPYEIK VQNRSNVDQFLEISSIIGHQENRDLSLSEGDIILFSRSKKPLTDAEAPHCLARIYKVKRQ KAHLEIVYQVMPGGSLAPQLTTQQLIYGVKIQSITPLEREYGALKGLTYYDLCNQIVRAK PSSKINFSERQINSYRDCWNLNAAQSEAVNGALENEGFTLIQGPPGSGKTKTIVAIVGGL LSQTLANNPRGATRISVPAANSNFASDSASKKLLVCAPSNAAVDELVIRLKQGVKTKNGQ NHAINVVRLGRSDAINTQVRDVTMDELVAKKLGGGNEADEKQRQRNAELFKEHEQISAQL RELYAQRDAADAGEKMPEKERKTLDDSIVHVRRRKAELGARIDNVKDSERNAGREQELNR KRAQQAVLDQAHVICATLSGSGHDMFQSLNIEFETVVIDEAAQCVEMSSLIPLKYGCIKC IMVGDPKQLPPTVFSKEAAKFQYEQSLFVRMQNNFPDEVHLLDTQYRMHPDISLFPSRSF YDGLLKDGPSMAKLRAQPWHKSALLAPYRFFDVAGQHESAPKGHSLVNRAEIAIAELLYD RLRADFPDYDFTSKIGIITPYKSQLRELKNRFASKYGQQIFDFIEFNTTDAFQGRESEII IFSCVRASPAGGIGFLQDIRRMNVGLTRAKSSLWVLGNSESLMRGQYWKRLVEDARERDC LTSGDVKRMLHQPSSQFPASNNRTLSMLDASNIKTEPTKPSAKADGDHNDAASKPRQAER TPFAKAADAEKMDGIRYRFEDIKKSKHKAAIPSADDDVEMKDADQHAKMEDDEKSRSNTA NDGEDSKPASMREPSVAASNESASRANTPLSGGWDGPGNGSNGNARPQNPGLAQVPKPYK RKAASSSMFIPKKAKPGGR NT seq 6000 nt NT seq  +upstreamnt  +downstreamnt atggcgggaggcgagagactagttggcctgctcgagacccttgccaacctcgatgctggc gtgcactggttctgtccgcgccagaaggatgacgatggcgggcactttttcgacgaggac ctgggagatgcggcgtcagaaagcagccaggaaaaggcggaacgcatggaaaagatacaa gaagccagaggcaggcaagacgatgcaatggagacctgcatattgctggccttcaacgga ccggatgcagagccatatcaggccaagctgaagcactgcctctccaaacaactcacgcgc tgcgacatttgcgtgcgcgaattccatcgtgctcgacggcgcctgcgtaatcaattggaa tccgactactcaccagaagatgttcttttgttcatgcagaccttcgacgccatgaacagt gagcgtatcactgccggcctcgacgacatgaccgaggctttactggacatgcctcccgaa gaacgcaagatcactgcagtgggcgatgtcggcatgtatgccatgttcgaagcgctccat tgtattccctttctacgtcatgaggagctcctcgccaaacactttgatcagcccttccgg ctcgtgcagaccaagaagaaagtcaatctcccaaattatgcgcccggcatgattgccttt atgtactccgccaacgaagagcgcagaaattgggcagaacgtaacgtcaacagaatcaag cgtccgctcttcaaggaagagttcgagtatgctgtgaagcctttcttggaacccgccatg gccaaggttcacgtcatctcgctggacctcgtctatttaccccaatattggcgagcgacc aaactcattgtcgacagtttggacaagaccgctatggacgagggccttcgagcgctcgac accaatttcttcgtcatggcgcttgatcacttccagatcgacgctccacactttacggat ttgctcgccagtgtccagaaactcatccaagtgggcgcgggagatttctgggaggcagtg ggatcggccacaccacagaacgtgattgaggcaatctgtagagcacccggattcgagaca cttctcaccacacgcgatgagcgcgaacctctgcggctagaagagaagatgggctgggtt gacgcaatcattcacagcatcaagccggccaatcttgtaccacctcttcgaactcttctg aatcagctgttgcacaagtaccaggaagaacggtattcgaactatgcgagcagagtcacc tgggagaagggtctcactgcgcttcttgattccatcaacatcattactaacgccgtcgat ggagggcccgtctacgttcaccttgtcgaagccgttgcaaaagatcacatcagtccaatt ttgcaggagcttctcggaattgaaaagaaagacgaacccgccatctccaagactgagttg cttgacctcgatatcgtcgagcgtatacttgcaatggaagtcaagggccttgcccgagat cgacgctacattgagaagaatcacgatcttgaccatgagattggtgtctccagcctaaac ctctggaagatgaccatgcgagctgtcaagcctggaaatgcgtacctgccgactgccatt ttgttcggcatcaagcgcctggtccagcttgatgcactgccgcctgtcgacctcaagaag gcgccaaagccagcaccgaattggaacaacgcactctcgcgagcccagaatcatgtcatt acagactttctgggacgcgttgatcacttcacgcccgagcagctgatggacttgctgatg gatcagaaggcatcacaaggcttcatgacgcttttgttcagtgccaatgacgagatccat cagagcacgctttcagcgctgaaggcactgagcggccaagacaatcgaagagacagtttg ttccacgtcattgaactcatgctcggtacaatgctatccgccgtcggagagagtctggga ctgattcaggaagcacgcatatttggtccctgcgaggtttccctcaagctttgtcgagat atactcgactgcctctgtaacacgcaggatggcattcttcgcaaggagagtcgttggact gaatccgatctccgagcgctcaaggtgttctggttccgagtttggagtatcaccgaaatg atcttcgaaatgactgagcattggagtggaacaggcctcgacaagcacaaaatgcaggaa ttctgtcgcgatacaatggactttgcagagtacacattcgatcaatacgcagtcctcgct ggtgtcatcgactctagtggtgctcccggagatagcaagtcgctcctcaattgcacgaat cgagcgtttcggagcgtagtcaagtggcttcgactgcgcgatgattacctcatcactaaa gctgtcagtctgaccagcaagatgttgattaggttgcaagatgttggtataagagttggc gaagaagcagaggattacgttgaaaggattgtaatagagaccggctcccaaaagatcaaa acgaagcttgcagcacaccacaaagccgagctgcagcgcgctctggaacgacacattggc gattctctgtcaggcatcattgaaacatcccaagccaagaaaaagcagagctctcttgat agattcgcattcgcaggacgcgccggtagcgaatctggagcttcaacgcccacctctaca accgcatcgaaagccaaaggcactctggacatcggcaaatggagcaaagctgtcgagcag aagaaaggagagccgaaggagccaaagttcaacaatcttctgaagcagcagcaagagatg aagcagaaacaacaactacaagatgcattcgttgctaaccgtaggaaagctcaggctgaa gacaaagccaggcgcgaagctgctctcgcaaaggcaaaatcttctggtgctgggactgga gttttgggcgttggcaactatggcgcagatcactctgtgaaagggcagactgtcatggtt gattctgatgacgatgagagcgattcagaggatgaccttgacaacgatttatttggaccc ccaggcaagccgaagaaacaggtacgaccggagcttgacctcagcaacgcgcaagggctc aaacctgaagtcaaaaatcgtgcaactcgcatcaatcgtcagaatcgttcgcacaaggac atgcgcgctcgacttgcgccggatctgggaccattacaccgcataatcttgggctgggat gtcttctactcaggagactatccaccaggacacaactcgcacgaattctctacagtggag aactcattccgcgacccaatcacctaccagaacacgtttgagcctctgctgatccttgag gcatggcaaggaatggccaaagagcgggaagaaagcagctctaagccctacgagatcaag gtgcagaatcgcagcaatgtcgaccagtttctcgaaatcagcagcatcatcggacaccag gagaatcgcgacctgtcactttcagaaggtgacatcatcctcttttcgagatcgaagaag cctctcaccgatgctgaagcacctcattgtctcgctcggatatataaagtcaagcgtcaa aaagcacacctcgaaattgtctaccaagtcatgcccggtggatcgctggcaccacaactc acaacgcaacagctcatctacggtgtgaaaatccaatctattacaccgttggagcgcgag tatggagcgctcaagggtttgacctactacgatctctgcaaccagatcgtcagagccaag ccatcgtcaaagatcaacttcagtgaacgccaaatcaattcttatcgtgattgctggaat ctcaatgcagcgcaatcggaggctgtaaacggcgctctagaaaatgaaggctttacactc attcaaggtccgcccggatctggcaagaccaagaccattgtggcgattgttggtggactt ctttcgcaaacgcttgccaacaacccaagaggtgccacgcgaatctctgttccggcagcg aacagcaactttgccagtgattcggcgtccaagaaacttcttgtctgcgcgcccagcaac gctgcagtagatgaattggtcattcgtctgaagcagggcgtgaagaccaagaatggacag aatcacgcaatcaacgtggtgcgccttggtcgcagcgacgctatcaacacacaagtcaga gatgtcacaatggatgagctcgttgcaaagaagctgggcggcggcaacgaagccgatgag aaacagcggcagcgcaacgccgagttattcaaggagcacgagcaaatctccgcccagcta cgagagctttatgcacagcgtgatgcggctgatgccggtgagaaaatgcccgaaaaggaa cgcaagactttggacgattcaatcgtgcacgtaaggcgtcgcaaggccgagctaggcgca cggatagacaatgtcaaggattcagaacgcaatgctggacgtgagcaagagctgaatcga aagcgagcgcagcaagccgtgcttgaccaagcacatgtcatctgcgcaaccctctccgga tctggtcacgatatgtttcaaagcctgaacattgaattcgagactgtcgtcatcgatgag gcggcacaatgtgtggaaatgagctcactcattcctctcaagtacggctgcatcaaatgc atcatggtcggtgaccctaagcaattgccgcccacagtcttctcgaaagaggcggccaaa ttccagtatgagcaatcacttttcgtgcggatgcagaacaactttcctgatgaggtgcat ctacttgacactcagtaccgtatgcatcccgacatcagtctgtttccgagcagatccttc tacgacggcttgctcaaagacgggcccagtatggcaaagcttagggcgcagccgtggcat aagagtgctctgctcgcgccataccgattctttgacgttgctggacaacatgaatcggct cccaaaggccactctttggtgaaccgagctgaaattgcgatcgcggagttgctgtacgat cgtctacgagcagactttccggactatgatttcaccagcaagattggtatcatcacgcca tataaatcgcaacttcgcgagctgaagaaccgatttgcctcaaagtacggacagcagatc ttcgacttcatcgagttcaacacaacggacgctttccaaggtcgtgagagcgaaatcatc atcttttcttgcgtgcgtgcttcacccgccgggggcatcggtttcttgcaagacattcga cggatgaacgtcggtctcactcgagcgaaaagcagtctttgggtgttgggaaactcggag tcgcttatgcgtggtcagtactggaagcgactggttgaggatgcgcgcgagcgggattgc cttacaagtggagacgtgaagcgcatgttgcatcagccatcgagccagtttccagccagc aacaacaggactctgagcatgctagatgcgagcaatattaagaccgagccgaccaagcca tcggcgaaagctgacggagaccataatgacgctgcatcaaagcctcggcaagcagaaagg acccctttcgccaaagctgccgatgctgaaaagatggatggtatacgatatcgctttgaa gacatcaagaagagcaagcataaggctgcaatacccagcgctgacgatgacgtggaaatg aaagatgctgaccaacatgccaagatggaggatgatgaaaagagtcgatcgaacacagcg aacgacggagaagactccaagccagcttcgatgcgcgagccgtcagtcgcggcatcgaat gagtcggcatcgagggctaatactcctctgtctggaggatgggatggcccgggcaacggc agcaatggcaacgcgagaccacagaatcccgggcttgcgcaggtgcccaagccatacaag cgaaaagcggcaagcagcagcatgtttatacctaagaaagcaaagcccggcggcagatag

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