Pseudocercospora fijiensis: MYCFIDRAFT_55530
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Entry
MYCFIDRAFT_55530 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K03267
peptide chain release factor subunit 3
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MYCFIDRAFT_55530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_55530
03012 Translation factors [BR:
pfj03012
]
MYCFIDRAFT_55530
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MYCFIDRAFT_55530
Translation factors [BR:
pfj03012
]
Eukaryotic type
Release factors
MYCFIDRAFT_55530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
19340224
NCBI-ProteinID:
XP_007920163
JGI:
55530
UniProt:
N1QCB6
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MANDQPPDSWEDEHLAQQTQQQMNFQSSAAPARPNTFVPGANSFTPGAQSFQPAQQYQQY
GYGQQYGQYQQYGQYQQYGYAQGQGQTYAQYGQQGGNYGNSSQQYPQPAQQQSYVPPHQR
QQQQQTPMIAKRGEALPSGNQQPAAPKPAASNGAVKTLSLSAADTGATKPKVEKTGGTKV
LSLGGTSAPPSTAQEKEKPKEAISKDAPAAGNKVAAAKAVEKTGESSAAGSGRASPTPSG
SGRSSPSRAETKAEARRADLVAQEQANEVDEEELKEMYGKEHVNVIFLGHVDAGKSTLGG
SILYATGMVDERTMEKYKRDAKDLGRESWYLSWALDQTKEERAKGKTVEVGRGFFETEKR
RYSILDAPGHKTYVPNMVSGASQADIGVLVISARKGEYETGFEKGGQTREHAMLAKTQGV
NKLVIAVNKMDDPTVNWSEERYKECTAKLIAFLKGLGYNPKTDLTIMPISAQTTVGIKTR
VPKETAPWYDGPSLLEYLDSMQQLERKLTSPFMMPIAAKYRDLGTMIEGKIEAGVIKKEN
KYLMMPNRAEITISALYGETEDEIPHATCGDQVRIRIKGAEEEDILPGFVLCSPKRPVHC
VNQFEAQIRLLELKSILSAGFNCVLHVHSATEEVTFAALLHKLEPKTNRKSKKPPGFAKQ
GMNIIARLQVTGAAGAVCVERFEDYPQLGRFTLRDQGQTIAIGKITKLITDAAEAAEGSI
QNTAP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccagccgccagactcgtgggaggatgagcatctcgcccagcagacgcag
cagcagatgaactttcagagcagtgccgcgcctgcacgcccgaacacattcgtccccggc
gcaaactcattcacaccaggcgcacaatccttccagccagcccagcagtaccagcaatat
ggctacggccagcaatatggacaataccagcagtatggacaatatcaacagtacggctat
gcacagggccaaggccagacatatgcgcagtacggtcagcagggtggaaactatgggaac
agctctcaacaatacccgcaaccagcacaacagcagtcatatgttcctccccaccagagg
caacagcagcagcagacccccatgatcgccaagcgaggcgaggcacttccatcaggcaac
cagcagcctgcagcgccaaagcctgcagcctcaaatggcgcagtgaagacgctctccctg
agcgctgctgatactggcgctacaaagccgaaggtcgagaagactggtggcaccaaggtc
ctgtctcttggcggcacatctgcacctccctccacagcccaagagaaggagaagccgaag
gaggccatctccaaagatgcacctgccgcaggtaacaaagtcgcagccgccaaggctgta
gagaagacaggcgaatctagtgcagcgggcagcggcagagcttcgccaactccttctgga
tctggacgctcatctccatcccgggctgagaccaaggctgaagctcgccgggctgatctg
gttgcacaggaacaagcgaacgaggttgatgaggaggagctcaaggagatgtacggaaaa
gagcacgttaatgtcatcttcttgggacatgttgatgcaggcaagagtactttgggagga
agcattctctacgcaactggtatggtagatgagagaactatggagaagtacaaacgggac
gcaaaagatcttgggcgagagtcatggtacttgtcatgggctctggaccagacaaaggaa
gaacgagccaagggaaagacagtcgaggttggtcgaggattctttgaaacagaaaagcga
cggtactccatccttgacgcacctggacacaagacctatgtgccaaacatggtgtctggt
gcttcgcaggcagacatcggagttcttgtcatttctgctcgtaagggtgagtacgagaca
gggttcgagaagggtggccagactcgtgagcacgccatgcttgcaaagacccaaggtgtg
aacaagctagtgattgctgtcaacaagatggatgaccccaccgtgaactggtcagaggaa
cgatacaaggagtgcacggctaaattgatcgccttcttgaagggtcttggttacaacccc
aagaccgaccttaccatcatgcctatctccgcacagaccacagtcggaatcaagacacga
gtaccaaaggagactgcaccatggtacgatggcccatcactgttggagtacctcgactcc
atgcagcagctcgaacggaagctcacttcgccattcatgatgcccattgccgccaagtat
cgagatcttggaaccatgattgaaggcaagatcgaagcaggtgtcatcaagaaggagaac
aaatacttgatgatgccaaaccgcgccgagatcaccatctccgcattgtacggggagact
gaggacgaaattccacacgctacttgcggtgaccaagtccgcattcgtatcaagggagct
gaagaagaagacattctgcccggattcgtgctctgctcaccgaaacgccccgtacactgc
gtcaaccaattcgaagctcaaatcagattactggagctgaagtccatcctgtcggccggc
ttcaactgcgtcctgcacgtccactccgccaccgaagaagtcaccttcgcagctctgctc
cacaagttagagccaaaaaccaaccgcaagtcgaagaagcctccgggcttcgctaagcag
ggcatgaacatcatcgcaagactacaggttactggtgccgctggcgccgtatgtgtggaa
cgattcgaagactacccgcagcttggacgatttacgctgagagatcagggtcagacgatt
gccatcggcaagatcacaaagctgatcacggatgcagctgaggcagctgagggttctatc
cagaacactgcgccgtaa
DBGET
integrated database retrieval system
