Pseudocercospora fijiensis: MYCFIDRAFT_55795
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Entry
MYCFIDRAFT_55795 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MYCFIDRAFT_55795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfj04121
]
MYCFIDRAFT_55795
Enzymes [BR:
pfj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
MYCFIDRAFT_55795
Ubiquitin system [BR:
pfj04121
]
Ubiquitin ligases (E3)
HECT type E3
MYCFIDRAFT_55795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
19340244
NCBI-ProteinID:
XP_007920183
JGI:
55795
UniProt:
N1QBC3
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MKDVDEKREQPDQDPNEDEQSRQDAGLGADGNELDAMDRGEDPFATGYLSRFGGHAGLSN
SLRALSGIVSGQNSRLRGLLEQLRAKDDPSLQLIALQELSEILLVSNEDNLAGHFAPDQY
VKELVSLMQPNEFTGEENPEVMLLACRCIANMMEALPAATASVVYGGAVPVLCQKLLEIN
FIDVAEQALSTLEKISIEFPSSIVREGGLTACLTYLDFFATSTQRTAVTTAANCCRNIPE
ESFPTVRGVMPILLNTLSSSDQRVVEQASLCVSRVIDSFKYHDSKLEELVSPELLKAVLR
LLLPGTTNMIGPNIHTQFLRVLSITARASPRLSAELLKMNVVDTLYQILTGVSPPTGTDE
IAAKIDKNVIMQAIIRTPREQIFETLNVICELLPTVSQGSLMFLDDLQDAGYTGPDNASM
STRSKTAPNDKRVELLKQCPDEVKRFAIILFPTLMHAYTSTVNLSVRQKVLTAQLKMLSN
LEAEILKEALRGVTYASHLASILSQQDNTSLVTFALQAAELLLKRLESLYRPQFYREGVM
AEIKKLADRPLKTLGASEKHSSLGTAAIIPDEGHDDHEENHNEEDEPIEVDMEDGGSEDH
DHHDEPREAEHDEEDIDEHEKPRQGRVEDEDDDDDEDDADNDQERSIDSDLAASRPAQHI
LDLQDVTTLRARRFLETHGEAASEQMQSRATEVLDDIKALADQLRACYSGAAAGSGTEIF
TRLAKYFDGDTVQSITSYELMTSGIVDVLLDLFTAANEEAATAARSDFLEVFMATQQAIV
ITRDAKSPSTAFSVLTHKLQELLSRAEHFEVITVHHNAFESNRGSAASMLAKQLRLKLVA
DDDSGIPRPYRNIMVSIHAIATFKALDDYLRPRISMGDRPRGSRRGDMSSAMAAYAAAMA
GRGDRSIPPPPTLPTLGSSTLPTRSTGKKMPRTKSSKSAPETGTEPGKTEDNRDALQEAL
ECADEAHISDDDDDMDADLDALVDDLEDGALERDEPDPSAVNLEVANSGKVTARTEDGAR
VSTPSQGIPTPTSTADRLSASARLAAARELLSTPTLSTRPMSYASAVQKTPEDWHIEFSV
NNQPIASDTTIYRACHFNQAHGDEVSARNIWSATHAISFKKVAGPPPSDRSSRTPPPMPD
ATSQNGLPPSLDNHPVTSGILRLMSILHALNANLDDVLAEHKATVKLNAEPPSQFVNTKL
TAKLNRQLEEPLIVASQCLPTWAEDLARLYPFLFPFETRHLFLQSTSFGYSRLMSRWQNS
QEESSRSRHRDERPFLGRVQRQKVRISRSRMLESAMKVMELYGSSSSMLEVEYFDEVGTG
LGPTLEFYSTVSKEFSKKKTKLWRENESLDNSEYAFGKRGLFPAPMSEEMARKENGQKVL
NMFKMLGKFVARSMLDSRIIDVSFNPTFFRVGASTTTVTPSLGAVAAVDEGLAHSLKVLR
KYANAKQRIDEDATLSPDQKASKAEQIRINDAHIEDLGLDFTLPGHPDIELLPYGSTINV
TIDNVGQYIKKVIDFTLQSGVQRQVEAFRTGFSLVFPYSALRAFTPDELCMLFGHGEEDW
SLETLMDSIKADHGFNLDSRSVRNLLQAMSEFSSQDRRDFLQFVTGSPKLPIGGFKSLTP
MFTVVRKSADAPYTSDDYLPSVMTCVNYLKMPDYSSLEVLKSRFNTASKEGQGAFHLS
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgtggacgagaagagagagcagccagatcaggatccgaatgaggacgaacag
tctcgtcaggatgctggacttggggcagacggcaatgaactggacgccatggatcgtggt
gaggacccatttgcaactggctacctttcccgatttggcggtcacgctggactgtcaaac
agtctgagagctctatctggcattgtctcgggccagaacagtcggctccgcggcctgctc
gagcagttgcgtgccaaggacgatccatcattacagctcattgccctgcaagaactttct
gagattcttctggtcagcaatgaggataacctcgctggacatttcgctcccgatcaatat
gtcaaagagctggtatcactgatgcaaccgaacgagttcactggtgaggagaatccagag
gtcatgctgctcgcttgccggtgcatcgcgaacatgatggaagctcttccggcagcaacg
gccagtgtcgtttacggtggagcagtgccggtcctgtgtcagaaactgcttgaaatcaac
ttcatcgatgtcgctgagcaggcactcagcaccttggagaagatttcaatcgagtttcca
tcctcaatcgttcgagaggggggcctcacggcatgcttgacatatctggacttcttcgcc
actagcacgcagagaaccgctgtcaccaccgctgcgaattgctgtcgtaacattccggag
gagtcatttccgacagtacgcggtgtaatgccgatactcctcaacacgctttcaagcagc
gaccagcgggttgtggaacaagcttcgctctgtgtgtctagggtcatcgacagcttcaag
tatcatgacagcaagctggaggagctcgtgagcccagagctgctcaaggcagtcctgcga
ctcttactgccaggcactaccaacatgattgggccaaacattcatactcagttcttgcga
gtcctctcgatcactgctcgtgcaagcccacggctttctgcggagctcctcaagatgaat
gtagtggatacactctaccaaatcctaacaggagtgtcgccacccacaggcacagacgag
attgctgccaagatcgacaagaatgttattatgcaagccatcatccgaactcctcgcgag
cagatttttgagactttgaatgtcatctgcgagcttttgccaacagtatcccaaggcagt
ctcatgttcctcgacgatctgcaggacgccgggtacaccgggccagacaatgcatccatg
tcaactcgctcaaagacagctcctaacgacaagagagtcgaactcttgaagcagtgcccg
gacgaagtcaagagattcgccatcatcttgttcccaactttgatgcacgcatacaccagt
accgtcaatctttccgtgcggcagaaagtgcttactgctcagctcaaaatgctctccaac
ctggaagccgaaatactcaaggaggctctcaggggtgttacttatgcatctcatctggca
tcgatcttgtcgcaacaggacaacacttcgcttgtcacatttgcgctccaggccgccgag
ctgctattgaagcggctggagtccctttatcgaccgcaattctaccgtgaaggtgtcatg
gccgagatcaagaaacttgctgatcgaccactcaagacactaggagcgtcagaaaagcac
tcctctcttggaacagctgccatcatcccagacgagggtcatgacgaccacgaggaaaat
cacaatgaagaggatgagccgatcgaagttgacatggaagacggaggttcagaagaccac
gatcatcatgatgagccacgtgaagccgaacacgacgaagaagacattgacgaacacgag
aagcccagacagggccgcgtcgaggacgaggatgatgatgacgatgaagatgacgctgat
aacgaccaagagcgctctatcgactctgacttggctgcatctcgaccggcacaacacatt
ctggatctacaggacgtcaccactttgcgagccaggcgattccttgagacccatggcgaa
gcagctagcgagcaaatgcaatcgcgggcaaccgaagtgttggacgatatcaaggcactt
gcagatcagctgagagcatgctattcaggcgctgccgctggaagtggaacggaaattttc
acacgcctcgccaaatacttcgatggtgataccgttcagagcatcacgagctatgaattg
atgacctctggcatagtagacgtccttctcgacctattcacagccgccaacgaggaggcg
gcaaccgccgcacgctccgatttcctcgaggtcttcatggcaacacagcaggcaattgtc
atcactagggacgccaaatctccgtccacggcattcagtgtcctcacgcacaagcttcag
gaactgctcagccgtgccgagcatttcgaggtgattacggtgcaccacaatgcatttgag
agcaatagaggcagcgcagcttctatgttggctaagcagcttcgtctgaagcttgtagcc
gacgatgactcaggcatcccgcgtccttatcgaaacatcatggtctctatccatgcaatt
gccacattcaaggcgctagatgattacttgaggccgcgcatcagcatgggcgatcgcccg
cgtggttctcgtcgtggagacatgtcaagtgccatggcggcatatgcggcagcgatggct
ggccgaggagatcgatcaataccaccaccgcccacattgccaacgttggggagctcaact
ctgcctactcgcagcaccggcaagaagatgccgaggaccaagtcttccaaatctgcacca
gaaacgggaacagagcctggcaagactgaggacaatagggacgcacttcaggaggccctt
gaatgcgctgatgaagcgcacatctcggatgacgatgacgacatggatgctgatctggac
gcactggttgatgatcttgaagatggagccctggagcgcgatgagcccgacccatcggca
gtcaatcttgaggtggcgaactctggcaaagtcactgctcgcacagaagatggtgctcgt
gttagcacaccttctcaaggcatacccacaccaactagcacagcagaccgcctgtcagcg
tctgcccgacttgctgcagcacgagagctgctgagcacgcctaccctatccaccaggccc
atgtcctatgcctctgcggtgcagaagactcctgaggattggcacattgagttcagcgtg
aacaatcagccgatcgctagcgatactacgatctaccgtgcttgccatttcaatcaagct
cacggcgacgaagtctcagcacgtaacatttggtcagcgacccacgccatctccttcaag
aaggtagcaggaccaccgccaagcgaccgtagctcaagaactccgccgcccatgccagat
gcaacttctcagaatggtctccctccctctttggacaaccatcctgtaacttcaggcatc
ttgcgattgatgagcattttacatgccttgaatgccaatctggacgatgtcttggctgaa
cacaaggctacagtgaaactcaacgccgaaccaccatcccaattcgtcaacacgaagttg
acggccaagctcaatcgacagctggaggagccgttgatcgtggcgagccagtgcctcccc
acatgggcagaggatcttgcccgcctctatccctttctctttccgttcgagacacgccat
cttttcctgcaatcgacctctttcggatactctcggctcatgtcgcgctggcagaacagc
caggaagaatcatcacgcagccgccatcgcgatgaacgcccgttcttgggacgagtgcag
cgccaaaaagttcgtatctcacggtctcgcatgctcgaatctgccatgaaggtgatggag
ctctatggctcatcctcgagcatgctggaagtcgaatactttgatgaggtcggcactgga
ctgggtccgaccttggaattctactccactgtttccaaagagttttccaagaagaagacc
aagctgtggcgcgagaatgagtccttggacaacagcgagtacgcatttggcaagcgcggc
ctattccctgcgccaatgagtgaagagatggcacgtaaggagaatggccagaaggtacta
aacatgttcaagatgctgggcaagtttgtggcacgatccatgcttgactcgcgcatcatc
gatgtgtctttcaacccgaccttcttccgtgtcggtgcaagcaccacgacggtcacccca
tcgctcggcgccgtggctgcggtcgacgaaggccttgcccactcgctcaaggtcctgagg
aagtatgccaatgctaagcagcgcattgacgaagatgcaaccctctcgccggatcaaaag
gcctccaaggcagagcaaattcgaatcaatgatgctcatatcgaagatctcggtctggac
ttcaccctgcctggtcatcctgatatcgaacttcttccatatgggtccactatcaatgtc
accatcgacaacgtcggacagtacatcaaaaaggtcatcgactttactctacagtctggc
gtgcagagacaggtggaagccttccggactggtttctcactcgtcttcccatactcggca
ctgagagcgttcacgccggatgagctctgcatgcttttcggtcacggagaggaggactgg
tcacttgaaacgctgatggactctatcaaagccgatcacggatttaacctggacagtcgc
agcgtccgcaacctgctgcaagccatgtcagagttctcgtctcaagaccggcgcgacttc
ttgcaatttgttacgggcagcccgaagctgccgatcggaggcttcaaatcgctcacccca
atgtttaccgtggtccgcaagagcgccgatgcgccatatacctccgacgattacctaccc
agtgtcatgacatgcgtcaactatctgaagatgccagattacagctcacttgaagttctc
aagtcgagattcaatacagcttccaaggaaggccagggagctttccacttatcatag
DBGET
integrated database retrieval system