Pseudocercospora fijiensis: MYCFIDRAFT_60422
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Entry
MYCFIDRAFT_60422 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MYCFIDRAFT_60422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfj03041
]
MYCFIDRAFT_60422
03009 Ribosome biogenesis [BR:
pfj03009
]
MYCFIDRAFT_60422
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MYCFIDRAFT_60422
Spliceosome [BR:
pfj03041
]
Complex A
U2 snRNP components
U2 related factors
MYCFIDRAFT_60422
Complex B
MYCFIDRAFT_60422
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
MYCFIDRAFT_60422
Ribosome biogenesis [BR:
pfj03009
]
Eukaryotic type
90S particles
Helicases
MYCFIDRAFT_60422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
ResIII
AAA_30
nSTAND3
AAA_7
T2SSE
ABC_tran
PhoH
Motif
Other DBs
NCBI-GeneID:
19340596
NCBI-ProteinID:
XP_007930613
JGI:
60422
UniProt:
M3AP95
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MSDAEQPKKSRFKRVKTSDDRSNPYLAHMYSDTHNGDSNGVNLNGSSSNGASTSTDLTTW
KRNATTAKMAEIAENGPANPFTGLPLSERYFGILKTRRDLPVHAQRQEFLHMFQKTQILV
FVGETGSGKTTQIPQFVLYDDLPQQQGKMVACTQPRRVAAMSVAQRVAQELDVKLGEEVG
YSIRFEDMTGPKTVLKYMTDGMLLREAMNDHDMSRYSCIILDEAHERTLATDILMGLLKE
VVKRRPDLKLIIMSATLDAQKFQKYFHNAPLLAVPGRTHPVEIFYTPEPERDYVEAALRT
VLQIHATEPEGDILLFLTGEEEIEDACRKISMEGDEMIREAGAGPLKVYPLYGTLPPAQQ
QKIFEPAPPPYTKGGKPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESL
LVSPISKASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIDQSYPEILRSNLANTVLELKK
LGVDDLVHFDLMDPPAPETLMRALEELNYLACLDDEGELTTLGKLASEFPLDPALAVMLI
SSPEFYCSNEMLSLTALLSVPQLFNRPAAARKRADEMKALFAHEDGDHLTMLNVYHAFKS
PAAQANPKQWCHDHFLSYRALQQADNVRLQLKRIMEREEIELMSTKFDDKNYYVNIRRAL
CAGFFMQVAKKDTSGKTYVTVKDNQSVLLHPSTVLGQDSEWVVYNEFVLTSKNYIRTVTA
VKPEWLLEIAPNYYDVDSFPKGEVQTSLRRTQNKLARRSERDR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgccgaacagcccaagaagtctcgcttcaagcgcgtcaagaccagcgacgac
cgatcgaatccatacctggcgcacatgtacagcgacactcacaacggcgacagcaacggc
gtcaacctgaatggaagtagcagcaatggcgcatccacctccaccgacctgaccacatgg
aagcgcaatgcgaccacggcgaagatggccgagatcgccgagaatgggcctgcaaatcca
ttcaccggcctgccgctgtcagagcgatattttggcatcctgaaaactcgccgagatctt
cccgtccatgcgcagcgtcaagagttcctgcacatgttccagaagacgcagatcttggtg
ttcgtgggggaaacaggttccggaaagaccacgcagatcccgcagttcgtgctgtatgac
gatctcccacaacagcagggcaagatggtggcgtgtacgcagccgcgtcgagtcgctgct
atgagtgttgcccagcgtgtcgcgcaagagttggatgtgaagctcggtgaagaggtgggt
tacagcattcgcttcgaggacatgactggcccgaagacggtgctcaagtacatgaccgac
ggtatgctgttgagagaggccatgaacgaccacgacatgtctcgatattcgtgtatcatt
ctcgacgaagcccacgagcgaacgctggcaactgacatcttgatgggtctgctgaaagag
gtggtcaagagacgcccggacttgaagctgattatcatgtctgctacacttgatgcgcag
aaattccagaaatacttccacaatgcaccgcttcttgccgtgcctggccgaacgcatcca
gtcgagatcttctatacaccagagcccgagcgagattatgtggaagcggcactgcggaca
gtcttgcagattcacgcaacagaaccagagggcgacatattattgttcttgacgggagaa
gaagagatcgaagacgcatgtcggaagatcagcatggaaggagacgagatgatacgagaa
gcaggagctggaccgctgaaggtctaccctctctacggtaccctaccaccagcgcagcag
cagaagatcttcgagcctgcgcctccaccctacacaaaaggcggcaagcctggtcgcaaa
gtcatcgtgtctacgaacatcgccgaaacatctctcaccatcgatggcattgtctacgtc
gtggatcctggcttcagcaagcagaaagtctacaacccgcgaatccgagtcgaatcactg
ctcgtctctccaatcagcaaagcttccgcacagcagagagctggtcgtgctggtcgtacc
cggcctggaaagtgcttcagactatacaccgaagccgcattcaagaaggagctcatcgac
cagtcgtaccccgaaatcctgcgctccaacttggccaacacggtcctggagctcaagaag
cttggcgttgacgatctggtccacttcgatctcatggatcctcctgcaccggagactctc
atgcgagctttggaagagctaaactacctcgcatgtttggacgacgagggagagctcacc
actcttggcaagctggcctcagagttcccactcgaccctgctcttgcagtcatgctcatc
tccagtcctgaattctactgctcgaatgaaatgctgtcgctcacagctctcctttcggta
ccgcagctcttcaatcggccagctgcagcacgtaagcgggcggacgagatgaaagctctc
tttgcacacgaggacggcgatcatctgactatgctcaacgtctaccatgctttcaagtct
ccggctgctcaagcaaaccccaagcagtggtgtcacgaccacttcctctcataccgagca
cttcagcaagcagataacgtacgactgcagctaaagcggataatggagcgggaagaaatc
gagctcatgtcgaccaaatttgacgacaagaactactacgtcaacatccggagagcactt
tgtgctggcttcttcatgcaagtggccaagaaagatacatcgggcaagacatacgtcact
gtcaaggataaccagagcgtgctgcttcacccatccaccgtgcttggccaagactccgaa
tgggtcgtctataacgagttcgtgctcaccagcaagaactacattcggactgtgactgct
gtcaagcccgagtggctgctggaaattgcgcccaactactacgacgtggacagcttcccg
aagggtgaggtccagacgagtttgcggaggacgcagaacaagctggcgagacgaagtgag
cgcgatcgatga
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integrated database retrieval system
