Pseudocercospora fijiensis: MYCFIDRAFT_71022
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Entry
MYCFIDRAFT_71022 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12601
superkiller protein 8
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCFIDRAFT_71022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_71022
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
MYCFIDRAFT_71022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Cytochrom_D1
WDR54
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
19340953
NCBI-ProteinID:
XP_007924340
JGI:
71022
UniProt:
M3A1D6
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MSKQYLQTLTIPDAHPTDIFSLAVTPSHLLTASGSSSIKIRSTKGKTIHADTAEDEDPYP
LVQTLEKVHKLGCHHVCTSLDGRVAASVGFAGDVKVWECAEDGQWRFKGDIVGEKKAGEH
WAPALSENGQYLAITSSDGRVNVYDTKPISEGKAEKITQYETKGSFGMSVDVSPNGEMTA
SGHQNGSIYIFNNSTRRLAHSLSGLIRPVRSVKFSPANRYLAAAGDARIIALYDTRSGEQ
VANLTGHASWIMSLDWNWSGEYLLSGSYDGKAKIWSIERRECVATQTESEKCLWAVKWLW
HSPTARNEIFVTAGAGKTLAFYREASGT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaatacctccaaaccctcaccatccccgacgcgcatcccactgacatcttc
tcactcgccgtcacgccttcacatctcttgacagcctccggatcatcaagcattaagatc
cgcagcacaaagggcaagacgatccatgccgatactgctgaagatgaagacccttaccct
ctcgttcaaaccctcgaaaaggtgcacaagctaggctgccaccatgtctgcaccagcctc
gacggcagagtagcagcaagtgtgggcttcgcaggcgatgtgaaggtatgggagtgcgca
gaagacggtcaatggcggtttaaaggggacattgtgggcgagaagaaggctggcgaacac
tgggcgccagcgttgagcgagaacggacaatatcttgccatcacctcttccgatggtcgc
gtcaatgtctacgatacaaaacccatctcagaaggcaaagccgagaagattacacagtac
gagacgaaaggcagctttggcatgagtgttgacgtctctccaaatggcgagatgactgca
tccgggcaccagaacggaagcatctacatcttcaacaacagcactcgacggcttgcgcac
tctctaagtggacttatcaggcctgtgcgaagtgtcaaatttagtcctgccaatcgatat
cttgcagccgctggagacgccagaatcattgcgctttacgacacccgcagcggcgagcag
gtcgccaacttgacaggtcatgcaagctggataatgagtctcgactggaactggagtggc
gagtatcttctcagcggtagctatgacggcaaggcgaagatctggagcattgagcgacga
gagtgcgtggccacgcagacggagagcgaaaagtgtctgtgggctgtcaaatggctctgg
cactcccctactgcgagaaatgagatttttgtgacggccggcgctggcaagactttggca
ttctatagggaggcgagtgggacgtag
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