Pseudocercospora fijiensis: MYCFIDRAFT_72213
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Entry
MYCFIDRAFT_72213 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCFIDRAFT_72213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfj03019
]
MYCFIDRAFT_72213
Messenger RNA biogenesis [BR:
pfj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MYCFIDRAFT_72213
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MYCFIDRAFT_72213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
FlaC_arch
WKF
DUF2524
DUF1192
PAN2_N
Motif
Other DBs
NCBI-GeneID:
19341039
NCBI-ProteinID:
XP_007925949
JGI:
72213
UniProt:
M2Z0Q5
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MAARKLQQEIDKEFKKVAEGVETFQGIYEKLTQSTNPSQKEKLEDSLKKEIKKLQRSRDK
IKGWASQNDIKDKKPLLDHRKLIETQMEKFKAVEKEMKTKAFSKEGLSAAAKLDPKEKEK
MEVCQFLSDMVDELGRQIEAHEAEAESLQATVKKSKKDSGKADRVAELERTVERHKWHTG
KLEVLLRSLENGSVDVDQVKEIEDGIKYYVEQNQEVDFMEDDSIYDDLNLEEDEEMYGLN
NNDDKVSSQDTQSIQDEPPDTDSVPIKPSKSKSMSDASGNARRPSVQLKTPLPALSSLHA
GTSNVNGKPVEIMKPAPLPTIPTGQTLKYASAAAAAAASDKNGVGIAPLPPPPGASKSTS
ETASPAASTAQPSIPVRPSAHVISAHPVLPPAANKVPQPPSPDSGIAGIALSNGASAEED
EEEECIYHLPSSLTDLLDSFEEIKQRGNSDQPFDLSMINTSRLTCPAPADAEKPNHYKPS
QPYSVNQPTYPQEPLGIFDDPRLYSRIDTDSLFYAFYYRQGTYQQYLAAKALKSQSWRFH
KQYQTWFQRHEEPKNITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDEVL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggaaactccaacaggagatcgacaaagagttcaagaaggtcgcggaagga
gttgagactttccagggcatctacgagaagctcactcagtcgacaaatccttcgcagaag
gaaaagctcgaagactcgttaaagaaggaaatcaagaagctgcagcgatcgcgagacaag
atcaagggttgggcaagtcaaaatgacatcaaggacaagaaaccgctgctggaccacaga
aagctcattgagacgcaaatggagaagttcaaggccgtggagaaggagatgaagacgaag
gcgttcagcaaagagggtctatctgccgctgcgaagctggatccgaaggagaaagagaag
atggaagtctgccaatttttatcagatatggtagatgaactggggcggcaaatagaagca
catgaggcagaggcggaatcgttacaagcaactgtcaagaagtcaaagaaggattcaggg
aaagccgaccgagtagcggaactggagcggactgtggagcgacacaagtggcatacgggc
aagctggaagttctactacggtcgctagaaaatgggagcgtagacgttgaccaggtgaag
gagattgaagatggcatcaagtactacgtggagcagaaccaggaagtggacttcatggag
gacgacagcatatatgatgacctgaatctggaggaagacgaggagatgtacggtctcaac
aacaacgatgacaaggtgtcaagtcaggatacccagagcatacaagacgaacccccggac
acagattctgtaccgatcaaaccctcgaaatccaaatccatgtcagatgcgtcaggaaac
gcgaggcgaccgagtgtgcaactcaagacacctctaccggccctttcatctctacatgcg
ggaacgagtaatgtcaatggcaagcctgtggaaatcatgaagcctgcacctctaccgaca
atacctacaggccagacactgaaatatgcttccgcagcggcagctgccgctgcgagcgat
aagaatggagttggtatcgcacctttaccaccgccacctggagcttcgaagagcacgagc
gaaacggcatcaccagcagcatcgacagcacagccctcgataccagtcaggccatcggca
catgtcatttctgcacatcctgtgttaccacctgcagcaaacaaagtacctcagccccct
agtccggactctggtatagcaggcattgccttatcgaatggcgcatctgcagaagaagat
gaggaggaagagtgcatataccacttgccgtcatcgctgacagacttactcgactcgttc
gaggaaatcaagcagcgaggtaactcggatcagccttttgacttgagcatgatcaacaca
tcacgactcacttgtccagcgcctgcggatgctgagaagcccaatcactacaagcccagc
cagccgtacagtgtgaatcagccaacatacccgcaagagcccttgggtattttcgatgac
ccgaggctctacagtcggatagacaccgacagtctcttctacgccttctactaccgacaa
ggaacgtatcagcaatatcttgcagcaaaagcactcaagagccagtcgtggcggtttcac
aagcaataccagacttggtttcagcggcacgaggagccgaagaatatcacggaagaattc
gagcagggcacgtatcgtttcttcgattacgagtccacttggatgaaccgtcgcaaggct
gacttcaagttcgcgtataagttcctcgaagacgaggtcctctaa
DBGET
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